Gene annotation
Transcriptome id Sobic.001G016200.1
Synonym Sb01g001590
Functional annotation "Nuf2 family protein(Ortholog in rice:Huang et al., 2012)" (PubMedID : 31659829)
nuf2 family protein, expressed
UniProt C5WT02
Pfam PF03800
Panther DB PTHR21650
NCBI CDD KOG4438; Centromere-associated protein NUF2
KEGG Orthology K11548; NUF2, kinetochore protein Nuf2
Gene Ontology GO:0007067; mitotic cell cycle GO:0000775chromosome, centromeric region


Orthologs (automatic annotation)
TAIR AT1G61000 : -
RAP-DB (Rice) LOC_Os03g38010.1 : nuf2 family protein, expressed
MaizeGDB (Corn) Zm00025a009022
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G016200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G369800 monocopper oxidase, putative, expressed -
2 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
3 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
4 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
5 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
6 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
7 Sobic.001G212600 a_IG002N01.7, putative, expressed -
8 Sobic.002G253900 growth regulator related protein, putative, expressed -
9 Sobic.003G283600 HVA22, putative, expressed -
10 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
11 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.007G036750 - -
13 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.001G540700 expressed protein -
15 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1
16 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
17 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
19 Sobic.010G052400 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
20 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2


Gene co-expression network
sample Sobic001G016200 Sobic001G016200 Sobic001G369800 Sobic001G369800 Sobic001G016200--Sobic001G369800 Sobic004G145300 Sobic004G145300 Sobic001G016200--Sobic004G145300 Sobic001G296800 Sobic001G296800 Sobic001G016200--Sobic001G296800 Sobic003G412800 Sobic003G412800 Sobic001G016200--Sobic003G412800 Sobic007G072100 Sobic007G072100 Sobic001G016200--Sobic007G072100 Sobic002G271400 Sobic002G271400 Sobic001G016200--Sobic002G271400 Sobic001G212600 Sobic001G212600 Sobic001G016200--Sobic001G212600 Sobic002G253900 Sobic002G253900 Sobic001G016200--Sobic002G253900 Sobic003G283600 Sobic003G283600 Sobic001G016200--Sobic003G283600 Sobic002G284100 Sobic002G284100 Sobic001G369800--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G369800--Sobic001G212600 Sobic004G145300--Sobic001G123100 Sobic004G145300--Sobic001G369800 Sobic001G123300 Sobic001G123300 Sobic004G145300--Sobic001G123300 Sobic003G224700 Sobic003G224700 Sobic004G145300--Sobic003G224700 Sobic004G145300--Sobic002G284100 Sobic002G335500 Sobic002G335500 Sobic004G145300--Sobic002G335500 Sobic002G006100 Sobic002G006100 Sobic004G145300--Sobic002G006100 Sobic001G171100 Sobic001G171100 Sobic004G145300--Sobic001G171100 Sobic006G200901 Sobic006G200901 Sobic004G145300--Sobic006G200901 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic003G179500 Sobic003G179500 Sobic003G412800--Sobic003G179500 Sobic010G079100 Sobic010G079100 Sobic003G412800--Sobic010G079100 Sobic003G289800 Sobic003G289800 Sobic003G412800--Sobic003G289800 Sobic010G103700 Sobic010G103700 Sobic003G412800--Sobic010G103700 Sobic001G051300 Sobic001G051300 Sobic003G412800--Sobic001G051300 Sobic009G119700 Sobic009G119700 Sobic003G412800--Sobic009G119700 Sobic010G151700 Sobic010G151700 Sobic003G412800--Sobic010G151700 Sobic002G351700 Sobic002G351700 Sobic003G412800--Sobic002G351700 Sobic009G189200 Sobic009G189200 Sobic003G412800--Sobic009G189200 Sobic003G411700 Sobic003G411700 Sobic007G072100--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic007G072100--Sobic003G343200 Sobic007G072100--Sobic002G253900 Sobic003G298900 Sobic003G298900 Sobic007G072100--Sobic003G298900 Sobic004G306100 Sobic004G306100 Sobic007G072100--Sobic004G306100 Sobic001G033300 Sobic001G033300 Sobic007G072100--Sobic001G033300 Sobic007G072100--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic007G072100--Sobic004G014100 Sobic001G425200 Sobic001G425200 Sobic007G072100--Sobic001G425200 Sobic002G271400--Sobic004G306100 Sobic002G271400--Sobic003G343200 Sobic006G127200 Sobic006G127200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic001G212600--Sobic003G351900 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G212600--Sobic001G369800 Sobic001G212600--Sobic001G296800 Sobic001G212600--Sobic010G222800 Sobic001G212600--Sobic001G487200 Sobic005G062600 Sobic005G062600 Sobic001G212600--Sobic005G062600 Sobic001G212600--Sobic002G006100 Sobic009G148000 Sobic009G148000 Sobic002G253900--Sobic009G148000 Sobic002G253900--Sobic001G123100 Sobic002G253900--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic002G253900--Sobic002G343000 Sobic001G005800 Sobic001G005800 Sobic002G253900--Sobic001G005800 Sobic002G253900--Sobic001G540700 Sobic002G253900--Sobic006G218900 Sobic002G253900--Sobic002G284100 Sobic002G253900--Sobic002G006100 Sobic001G290500 Sobic001G290500 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic001G468500 Sobic001G468500 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic003G283600--Sobic001G369800 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000
Octagon: transcription factors


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