Gene annotation
Transcriptome id Sobic.001G051100.1
Synonym Sb01g004690
Functional annotation uncharacterized PE-PGRS family protein PE_PGRS3 precursor, putative, expressed
UniProt A0A1Z5S4G6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g58850.1 : uncharacterized PE-PGRS family protein PE_PGRS3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008616
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G244600 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
2 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
3 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
4 Sobic.001G132200 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
5 Sobic.004G218000 SET domain containing protein, expressed -
6 Sobic.002G122000 - -
7 Sobic.002G061800 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
8 Sobic.009G042600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G053700 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
10 Sobic.007G056900 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
11 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
12 Sobic.010G212700 tetraspanin family protein, putative, expressed -
13 Sobic.005G163500 dnaJ domain containing protein, expressed -
14 Sobic.004G014300 THION20 - Plant thionin family protein precursor, putative, expressed -
15 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
16 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
17 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
19 Sobic.003G007200 aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.001G137400 ankyrin, putative, expressed -


Gene co-expression network
sample Sobic001G051100 Sobic001G051100 Sobic002G244600 Sobic002G244600 Sobic001G051100--Sobic002G244600 Sobic010G180200 Sobic010G180200 Sobic001G051100--Sobic010G180200 Sobic006G066400 Sobic006G066400 Sobic001G051100--Sobic006G066400 Sobic001G132200 Sobic001G132200 Sobic001G051100--Sobic001G132200 Sobic004G218000 Sobic004G218000 Sobic001G051100--Sobic004G218000 Sobic002G122000 Sobic002G122000 Sobic001G051100--Sobic002G122000 Sobic002G061800 Sobic002G061800 Sobic001G051100--Sobic002G061800 Sobic009G042600 Sobic009G042600 Sobic001G051100--Sobic009G042600 Sobic001G053700 Sobic001G053700 Sobic001G051100--Sobic001G053700 Sobic002G244600--Sobic006G066400 Sobic002G244600--Sobic001G051100 Sobic001G158300 Sobic001G158300 Sobic002G244600--Sobic001G158300 Sobic002G244600--Sobic010G180200 Sobic010G212700 Sobic010G212700 Sobic002G244600--Sobic010G212700 Sobic003G022900 Sobic003G022900 Sobic002G244600--Sobic003G022900 Sobic001G468000 Sobic001G468000 Sobic002G244600--Sobic001G468000 Sobic009G243000 Sobic009G243000 Sobic002G244600--Sobic009G243000 Sobic001G128200 Sobic001G128200 Sobic002G244600--Sobic001G128200 Sobic003G402100 Sobic003G402100 Sobic010G180200--Sobic003G402100 Sobic010G180200--Sobic001G053700 Sobic001G324800 Sobic001G324800 Sobic010G180200--Sobic001G324800 Sobic010G180200--Sobic006G066400 Sobic004G014100 Sobic004G014100 Sobic010G180200--Sobic004G014100 Sobic001G394900 Sobic001G394900 Sobic010G180200--Sobic001G394900 Sobic007G023600 Sobic007G023600 Sobic010G180200--Sobic007G023600 Sobic010G180200--Sobic004G218000 Sobic010G180200--Sobic010G212700 Sobic006G066400--Sobic001G468000 Sobic006G066400--Sobic003G022900 Sobic006G066400--Sobic010G212700 Sobic006G066400--Sobic010G180200 Sobic001G171100 Sobic001G171100 Sobic006G066400--Sobic001G171100 Sobic002G196500 Sobic002G196500 Sobic006G066400--Sobic002G196500 Sobic002G366000 Sobic002G366000 Sobic006G066400--Sobic002G366000 Sobic006G066400--Sobic002G244600 Sobic006G272800 Sobic006G272800 Sobic006G066400--Sobic006G272800 Sobic004G313400 Sobic004G313400 Sobic001G132200--Sobic004G313400 Sobic003G090000 Sobic003G090000 Sobic001G132200--Sobic003G090000 Sobic001G132200--Sobic004G218000 Sobic007G056900 Sobic007G056900 Sobic001G132200--Sobic007G056900 Sobic003G027000 Sobic003G027000 Sobic001G132200--Sobic003G027000 Sobic006G215800 Sobic006G215800 Sobic001G132200--Sobic006G215800 Sobic009G132400 Sobic009G132400 Sobic001G132200--Sobic009G132400 Sobic001G218600 Sobic001G218600 Sobic001G132200--Sobic001G218600 Sobic005G070301 Sobic005G070301 Sobic001G132200--Sobic005G070301 Sobic003G217300 Sobic003G217300 Sobic004G218000--Sobic003G217300 Sobic004G218000--Sobic007G056900 Sobic005G164800 Sobic005G164800 Sobic004G218000--Sobic005G164800 Sobic002G349000 Sobic002G349000 Sobic004G218000--Sobic002G349000 Sobic002G221100 Sobic002G221100 Sobic004G218000--Sobic002G221100 Sobic005G041900 Sobic005G041900 Sobic004G218000--Sobic005G041900 Sobic004G218000--Sobic003G022900 Sobic004G218000--Sobic009G042600 Sobic004G218000--Sobic010G180200 Sobic006G186300 Sobic006G186300 Sobic002G122000--Sobic006G186300 Sobic007G128400 Sobic007G128400 Sobic002G122000--Sobic007G128400 Sobic005G033700 Sobic005G033700 Sobic002G122000--Sobic005G033700 Sobic004G038900 Sobic004G038900 Sobic002G122000--Sobic004G038900 Sobic003G029900 Sobic003G029900 Sobic002G122000--Sobic003G029900 Sobic010G067200 Sobic010G067200 Sobic002G122000--Sobic010G067200 Sobic010G047300 Sobic010G047300 Sobic002G122000--Sobic010G047300 Sobic005G171800 Sobic005G171800 Sobic002G122000--Sobic005G171800 Sobic010G133150 Sobic010G133150 Sobic002G122000--Sobic010G133150 Sobic001G457600 Sobic001G457600 Sobic002G061800--Sobic001G457600 Sobic002G061800--Sobic007G056900 Sobic002G061800--Sobic009G042600 Sobic002G258000 Sobic002G258000 Sobic002G061800--Sobic002G258000 Sobic002G061800--Sobic004G218000 Sobic008G180400 Sobic008G180400 Sobic002G061800--Sobic008G180400 Sobic002G061800--Sobic003G217300 Sobic001G137500 Sobic001G137500 Sobic002G061800--Sobic001G137500 Sobic005G163500 Sobic005G163500 Sobic002G061800--Sobic005G163500 Sobic001G137400 Sobic001G137400 Sobic009G042600--Sobic001G137400 Sobic009G042600--Sobic004G218000 Sobic009G042600--Sobic001G457600 Sobic007G193300 Sobic007G193300 Sobic009G042600--Sobic007G193300 Sobic009G042600--Sobic003G022900 Sobic009G042600--Sobic002G061800 Sobic009G042600--Sobic005G164800 Sobic006G097300 Sobic006G097300 Sobic009G042600--Sobic006G097300 Sobic009G042600--Sobic003G217300 Sobic001G053700--Sobic003G402100 Sobic002G360900 Sobic002G360900 Sobic001G053700--Sobic002G360900 Sobic002G381750 Sobic002G381750 Sobic001G053700--Sobic002G381750 Sobic001G053700--Sobic010G180200 Sobic001G053700--Sobic001G394900 Sobic004G254400 Sobic004G254400 Sobic001G053700--Sobic004G254400 Sobic001G053700--Sobic001G324800 Sobic001G259300 Sobic001G259300 Sobic001G053700--Sobic001G259300 Sobic003G323000 Sobic003G323000 Sobic001G053700--Sobic003G323000
Octagon: transcription factors


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