Gene annotation
Transcriptome id Sobic.001G052200.1
Synonym Sb01g004780
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WX21
Pfam PF00069
Panther DB PTHR27005 PTHR27005:SF56
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G69910 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g58750.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008603
Brachypodium KQK12643
Barley HORVU5Hr1G012300.5 , HORVU5Hr1G012300.4 , HORVU5Hr1G012300.3 , HORVU5Hr1G012300.2 , HORVU5Hr1G012300.1 , HORVU6Hr1G020780.1 , HORVU5Hr1G054160.5 , HORVU5Hr1G054160.4 , HORVU5Hr1G054160.1 , HORVU5Hr1G054160.3 , HORVU5Hr1G054160.2 , HORVU3Hr1G088640.1 , HORVU5Hr1G107330.3 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1 , HORVU6Hr1G013060.1 , HORVU7Hr1G089060.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G052200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G171501 - -
2 Sobic.010G066300 OsRCI2-8 - Putative low temperature and salt responsive protein, expressed -
3 Sobic.001G061101 - -
4 Sobic.010G021100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed K12734: peptidyl-prolyl cis-trans isomerase-like 3
5 Sobic.004G325200 60S ribosome subunit biogenesis protein NIP7, putative, expressed K07565: 60S ribosome subunit biogenesis protein NIP7
6 Sobic.009G148700 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
7 Sobic.004G311300 expressed protein -
8 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
9 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.003G262100 expressed protein -
11 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
12 Sobic.006G108600 prohibitin, putative, expressed K17080: prohibitin 1
13 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
14 Sobic.010G148400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
15 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
16 Sobic.009G222600 expressed protein -
17 Sobic.001G117500 AT hook-containing DNA-binding protein, putative, expressed -
18 Sobic.001G130400 expressed protein -
19 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G328200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G052200 Sobic001G052200 Sobic010G171501 Sobic010G171501 Sobic001G052200--Sobic010G171501 Sobic010G066300 Sobic010G066300 Sobic001G052200--Sobic010G066300 Sobic001G061101 Sobic001G061101 Sobic001G052200--Sobic001G061101 Sobic010G021100 Sobic010G021100 Sobic001G052200--Sobic010G021100 Sobic004G325200 Sobic004G325200 Sobic001G052200--Sobic004G325200 Sobic009G148700 Sobic009G148700 Sobic001G052200--Sobic009G148700 Sobic004G311300 Sobic004G311300 Sobic001G052200--Sobic004G311300 Sobic002G138700 Sobic002G138700 Sobic001G052200--Sobic002G138700 Sobic005G080200 Sobic005G080200 Sobic001G052200--Sobic005G080200 Sobic009G131100 Sobic009G131100 Sobic010G171501--Sobic009G131100 Sobic001G536500 Sobic001G536500 Sobic010G171501--Sobic001G536500 Sobic005G127100 Sobic005G127100 Sobic010G171501--Sobic005G127100 Sobic003G003000 Sobic003G003000 Sobic010G171501--Sobic003G003000 Sobic001G198200 Sobic001G198200 Sobic010G171501--Sobic001G198200 Sobic010G171501--Sobic004G311300 Sobic006G108600 Sobic006G108600 Sobic010G171501--Sobic006G108600 Sobic010G171501--Sobic005G080200 Sobic001G081400 Sobic001G081400 Sobic010G171501--Sobic001G081400 Sobic002G427900 Sobic002G427900 Sobic010G066300--Sobic002G427900 Sobic004G352900 Sobic004G352900 Sobic010G066300--Sobic004G352900 Sobic009G156300 Sobic009G156300 Sobic010G066300--Sobic009G156300 Sobic010G066300--Sobic010G021100 Sobic001G285000 Sobic001G285000 Sobic010G066300--Sobic001G285000 Sobic010G045833 Sobic010G045833 Sobic010G066300--Sobic010G045833 Sobic002G254650 Sobic002G254650 Sobic010G066300--Sobic002G254650 Sobic001G526900 Sobic001G526900 Sobic010G066300--Sobic001G526900 Sobic003G317200 Sobic003G317200 Sobic010G066300--Sobic003G317200 Sobic001G061101--Sobic004G311300 Sobic006G246100 Sobic006G246100 Sobic001G061101--Sobic006G246100 Sobic009G065300 Sobic009G065300 Sobic001G061101--Sobic009G065300 Sobic009G121900 Sobic009G121900 Sobic001G061101--Sobic009G121900 Sobic001G061101--Sobic005G080200 Sobic001G117500 Sobic001G117500 Sobic001G061101--Sobic001G117500 Sobic001G432700 Sobic001G432700 Sobic001G061101--Sobic001G432700 Sobic004G010300 Sobic004G010300 Sobic001G061101--Sobic004G010300 Sobic001G061101--Sobic001G536500 Sobic001G037000 Sobic001G037000 Sobic010G021100--Sobic001G037000 Sobic010G021100--Sobic010G066300 Sobic004G247200 Sobic004G247200 Sobic010G021100--Sobic004G247200 Sobic001G204900 Sobic001G204900 Sobic010G021100--Sobic001G204900 Sobic010G217900 Sobic010G217900 Sobic010G021100--Sobic010G217900 Sobic009G222600 Sobic009G222600 Sobic010G021100--Sobic009G222600 Sobic002G205300 Sobic002G205300 Sobic010G021100--Sobic002G205300 Sobic001G047700 Sobic001G047700 Sobic010G021100--Sobic001G047700 Sobic001G422900 Sobic001G422900 Sobic010G021100--Sobic001G422900 Sobic010G054200 Sobic010G054200 Sobic004G325200--Sobic010G054200 Sobic008G100000 Sobic008G100000 Sobic004G325200--Sobic008G100000 Sobic003G244300 Sobic003G244300 Sobic004G325200--Sobic003G244300 Sobic006G081100 Sobic006G081100 Sobic004G325200--Sobic006G081100 Sobic001G225700 Sobic001G225700 Sobic004G325200--Sobic001G225700 Sobic006G115000 Sobic006G115000 Sobic004G325200--Sobic006G115000 Sobic003G268200 Sobic003G268200 Sobic004G325200--Sobic003G268200 Sobic003G073900 Sobic003G073900 Sobic004G325200--Sobic003G073900 Sobic001G510800 Sobic001G510800 Sobic004G325200--Sobic001G510800 Sobic002G424800 Sobic002G424800 Sobic009G148700--Sobic002G424800 Sobic001G449700 Sobic001G449700 Sobic009G148700--Sobic001G449700 Sobic005G109000 Sobic005G109000 Sobic009G148700--Sobic005G109000 Sobic004G241100 Sobic004G241100 Sobic009G148700--Sobic004G241100 Sobic001G259700 Sobic001G259700 Sobic009G148700--Sobic001G259700 Sobic006G075500 Sobic006G075500 Sobic009G148700--Sobic006G075500 Sobic007G123300 Sobic007G123300 Sobic009G148700--Sobic007G123300 Sobic003G102200 Sobic003G102200 Sobic009G148700--Sobic003G102200 Sobic002G319500 Sobic002G319500 Sobic009G148700--Sobic002G319500 Sobic004G311300--Sobic001G536500 Sobic003G135700 Sobic003G135700 Sobic004G311300--Sobic003G135700 Sobic004G311300--Sobic004G352900 Sobic004G311300--Sobic001G061101 Sobic010G194900 Sobic010G194900 Sobic004G311300--Sobic010G194900 Sobic006G010600 Sobic006G010600 Sobic004G311300--Sobic006G010600 Sobic003G110200 Sobic003G110200 Sobic004G311300--Sobic003G110200 Sobic004G311300--Sobic005G080200 Sobic004G311300--Sobic003G268200 Sobic006G259000 Sobic006G259000 Sobic002G138700--Sobic006G259000 Sobic001G084000 Sobic001G084000 Sobic002G138700--Sobic001G084000 Sobic007G090300 Sobic007G090300 Sobic002G138700--Sobic007G090300 Sobic004G086800 Sobic004G086800 Sobic002G138700--Sobic004G086800 Sobic010G102000 Sobic010G102000 Sobic002G138700--Sobic010G102000 Sobic001G195100 Sobic001G195100 Sobic002G138700--Sobic001G195100 Sobic003G416500 Sobic003G416500 Sobic002G138700--Sobic003G416500 Sobic009G010400 Sobic009G010400 Sobic002G138700--Sobic009G010400 Sobic001G287600 Sobic001G287600 Sobic002G138700--Sobic001G287600 Sobic005G080200--Sobic006G246100 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic005G080200--Sobic001G195100 Sobic010G194300 Sobic010G194300 Sobic005G080200--Sobic010G194300 Sobic003G037500 Sobic003G037500 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200
Octagon: transcription factors


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