Gene annotation
Transcriptome id Sobic.001G058500.1
Synonym Sb01g005320
Functional annotation expressed protein
UniProt C5WX85
Pfam -
Panther DB PTHR33401
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55475 : -
RAP-DB (Rice) LOC_Os07g07646.1 : expressed protein
MaizeGDB (Corn) Zm00025a016582 , Zm00025a008546
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G087900 protein phosphatase inhibitor 2 containing protein, expressed K16833: PPP1R2, protein phosphatase inhibitor 2
2 Sobic.010G018700 H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
3 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
4 Sobic.001G350501 - K11253: histone H3
5 Sobic.009G198100 expressed protein -
6 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
7 Sobic.001G329300 expressed protein -
8 Sobic.001G497900 XS domain containing protein, expressed -
9 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
10 Sobic.004G226800 expressed protein -
11 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
12 Sobic.007G187200 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
14 Sobic.008G142700 expressed protein -
15 Sobic.001G266400 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
17 Sobic.008G128600 miro, putative, expressed K07953: GTP-binding protein SAR1
18 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
19 Sobic.003G420700 expressed protein -
20 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma


Gene co-expression network
sample Sobic001G058500 Sobic001G058500 Sobic002G087900 Sobic002G087900 Sobic001G058500--Sobic002G087900 Sobic010G018700 Sobic010G018700 Sobic001G058500--Sobic010G018700 Sobic001G507400 Sobic001G507400 Sobic001G058500--Sobic001G507400 Sobic001G350501 Sobic001G350501 Sobic001G058500--Sobic001G350501 Sobic009G198100 Sobic009G198100 Sobic001G058500--Sobic009G198100 Sobic001G309100 Sobic001G309100 Sobic001G058500--Sobic001G309100 Sobic001G329300 Sobic001G329300 Sobic001G058500--Sobic001G329300 Sobic001G497900 Sobic001G497900 Sobic001G058500--Sobic001G497900 Sobic010G033400 Sobic010G033400 Sobic001G058500--Sobic010G033400 Sobic002G010300 Sobic002G010300 Sobic002G087900--Sobic002G010300 Sobic002G395801 Sobic002G395801 Sobic002G087900--Sobic002G395801 Sobic010G083700 Sobic010G083700 Sobic002G087900--Sobic010G083700 Sobic006G254700 Sobic006G254700 Sobic002G087900--Sobic006G254700 Sobic004G104900 Sobic004G104900 Sobic002G087900--Sobic004G104900 Sobic002G256300 Sobic002G256300 Sobic002G087900--Sobic002G256300 Sobic009G259400 Sobic009G259400 Sobic002G087900--Sobic009G259400 Sobic003G226500 Sobic003G226500 Sobic002G087900--Sobic003G226500 Sobic002G087900--Sobic010G018700 Sobic001G356600 Sobic001G356600 Sobic010G018700--Sobic001G356600 Sobic009G179700 Sobic009G179700 Sobic010G018700--Sobic009G179700 Sobic010G027600 Sobic010G027600 Sobic010G018700--Sobic010G027600 Sobic010G018700--Sobic004G104900 Sobic003G439800 Sobic003G439800 Sobic010G018700--Sobic003G439800 Sobic009G058500 Sobic009G058500 Sobic010G018700--Sobic009G058500 Sobic004G141700 Sobic004G141700 Sobic010G018700--Sobic004G141700 Sobic010G193800 Sobic010G193800 Sobic010G018700--Sobic010G193800 Sobic004G066200 Sobic004G066200 Sobic010G018700--Sobic004G066200 Sobic001G038100 Sobic001G038100 Sobic001G507400--Sobic001G038100 Sobic007G117100 Sobic007G117100 Sobic001G507400--Sobic007G117100 Sobic007G191700 Sobic007G191700 Sobic001G507400--Sobic007G191700 Sobic006G120800 Sobic006G120800 Sobic001G507400--Sobic006G120800 Sobic009G258400 Sobic009G258400 Sobic001G507400--Sobic009G258400 Sobic002G014700 Sobic002G014700 Sobic001G507400--Sobic002G014700 Sobic003G420700 Sobic003G420700 Sobic001G507400--Sobic003G420700 Sobic002G204000 Sobic002G204000 Sobic001G507400--Sobic002G204000 Sobic010G154000 Sobic010G154000 Sobic001G507400--Sobic010G154000 Sobic003G024800 Sobic003G024800 Sobic001G350501--Sobic003G024800 Sobic004G349100 Sobic004G349100 Sobic001G350501--Sobic004G349100 Sobic001G350501--Sobic001G309100 Sobic001G350501--Sobic010G193800 Sobic008G142700 Sobic008G142700 Sobic001G350501--Sobic008G142700 Sobic009G034400 Sobic009G034400 Sobic001G350501--Sobic009G034400 Sobic001G350501--Sobic003G420700 Sobic009G036900 Sobic009G036900 Sobic001G350501--Sobic009G036900 Sobic007G063200 Sobic007G063200 Sobic001G350501--Sobic007G063200 Sobic007G118200 Sobic007G118200 Sobic009G198100--Sobic007G118200 Sobic002G034600 Sobic002G034600 Sobic009G198100--Sobic002G034600 Sobic009G198100--Sobic010G033400 Sobic003G355000 Sobic003G355000 Sobic009G198100--Sobic003G355000 Sobic003G081000 Sobic003G081000 Sobic009G198100--Sobic003G081000 Sobic008G174300 Sobic008G174300 Sobic009G198100--Sobic008G174300 Sobic001G131800 Sobic001G131800 Sobic009G198100--Sobic001G131800 Sobic003G359300 Sobic003G359300 Sobic009G198100--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic009G198100--Sobic007G205000 Sobic001G309100--Sobic001G038100 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100 Sobic001G329300--Sobic002G204000 Sobic006G011000 Sobic006G011000 Sobic001G329300--Sobic006G011000 Sobic007G226100 Sobic007G226100 Sobic001G329300--Sobic007G226100 Sobic006G252100 Sobic006G252100 Sobic001G329300--Sobic006G252100 Sobic004G226800 Sobic004G226800 Sobic001G329300--Sobic004G226800 Sobic006G094600 Sobic006G094600 Sobic001G329300--Sobic006G094600 Sobic004G316900 Sobic004G316900 Sobic001G329300--Sobic004G316900 Sobic001G329300--Sobic001G350501 Sobic001G329300--Sobic010G193800 Sobic001G497900--Sobic002G034600 Sobic001G497900--Sobic003G355000 Sobic001G497900--Sobic009G198100 Sobic001G473600 Sobic001G473600 Sobic001G497900--Sobic001G473600 Sobic006G121300 Sobic006G121300 Sobic001G497900--Sobic006G121300 Sobic007G091600 Sobic007G091600 Sobic001G497900--Sobic007G091600 Sobic001G497900--Sobic001G356600 Sobic010G095700 Sobic010G095700 Sobic001G497900--Sobic010G095700 Sobic001G395100 Sobic001G395100 Sobic001G497900--Sobic001G395100 Sobic010G033400--Sobic007G118200 Sobic010G033400--Sobic008G174300 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic001G028400 Sobic001G028400 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic010G033400--Sobic003G359300 Sobic010G033400--Sobic003G081000 Sobic010G033400--Sobic001G131800
Octagon: transcription factors


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