Gene annotation
Transcriptome id Sobic.001G075600.1
Synonym ATCSLC12, CSLC12, Sb01g006820
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CSLC10 - cellulose synthase-like family C, expressed
UniProt C5WZ79
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G07960 : Cellulose-synthase-like C12
RAP-DB (Rice) LOC_Os07g03260.1 : CSLC10 - cellulose synthase-like family C, expressed
MaizeGDB (Corn) Zm00025a016690 , Zm00025a029882 , Zm00025a008347
Brachypodium KQK20919 , KQK12991 , PNT72924
Barley HORVU3Hr1G074570.2 , HORVU3Hr1G074570.3 , HORVU3Hr1G074570.1 , HORVU3Hr1G074570.6 , HORVU3Hr1G074570.7 , HORVU3Hr1G074570.4 , HORVU3Hr1G074570.5 , HORVU3Hr1G074570.8 , HORVU3Hr1G074570.9 , HORVU1Hr1G077230.6 , HORVU1Hr1G077230.7 , HORVU1Hr1G077230.4 , HORVU1Hr1G077230.5 , HORVU1Hr1G077230.2 , HORVU3Hr1G074570.10 , HORVU3Hr1G074570.11 , HORVU3Hr1G074570.12 , HORVU3Hr1G074570.13 , HORVU1Hr1G077230.1
Wheat TraesCS3A02G299500 , TraesCS1D02G334400 , TraesCS1D02G312700 , TraesCS3B02G337100 , TraesCS1B02G345400 , TraesCS3D02G302300 , TraesCS1A02G312600 , TraesCS5A02G405700 , TraesCS5A02G405700 , TraesCS5D02G415700 , TraesCS5D02G415700 , TraesCS1A02G331800 , TraesCS5B02G410400 , TraesCS5B02G410400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
2 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
3 Sobic.010G201388 - -
4 Sobic.001G042500 expressed protein -
5 Sobic.006G095300 expressed protein -
6 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
7 Sobic.001G429500 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed -
8 Sobic.007G196800 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
9 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
10 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
11 Sobic.006G265700 PPR repeat containing protein, expressed -
12 Sobic.001G429000 harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.004G077900 YIF1B, putative, expressed -
14 Sobic.001G352500 expressed protein -
15 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
16 Sobic.003G297200 lipase, putative, expressed -
17 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
18 Sobic.008G119400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
19 Sobic.003G322300 expressed protein -
20 Sobic.010G089500 annexin, putative, expressed -


Gene co-expression network
sample Sobic001G075600 Sobic001G075600 Sobic001G399300 Sobic001G399300 Sobic001G075600--Sobic001G399300 Sobic002G387800 Sobic002G387800 Sobic001G075600--Sobic002G387800 Sobic010G201388 Sobic010G201388 Sobic001G075600--Sobic010G201388 Sobic001G042500 Sobic001G042500 Sobic001G075600--Sobic001G042500 Sobic006G095300 Sobic006G095300 Sobic001G075600--Sobic006G095300 Sobic001G192700 Sobic001G192700 Sobic001G075600--Sobic001G192700 Sobic001G429500 Sobic001G429500 Sobic001G075600--Sobic001G429500 Sobic007G196800 Sobic007G196800 Sobic001G075600--Sobic007G196800 Sobic008G084100 Sobic008G084100 Sobic001G075600--Sobic008G084100 Sobic001G399300--Sobic001G042500 Sobic006G158200 Sobic006G158200 Sobic001G399300--Sobic006G158200 Sobic007G195800 Sobic007G195800 Sobic001G399300--Sobic007G195800 Sobic006G159600 Sobic006G159600 Sobic001G399300--Sobic006G159600 Sobic001G429000 Sobic001G429000 Sobic001G399300--Sobic001G429000 Sobic003G146400 Sobic003G146400 Sobic001G399300--Sobic003G146400 Sobic002G348100 Sobic002G348100 Sobic001G399300--Sobic002G348100 Sobic009G216800 Sobic009G216800 Sobic001G399300--Sobic009G216800 Sobic002G113500 Sobic002G113500 Sobic001G399300--Sobic002G113500 Sobic009G211900 Sobic009G211900 Sobic002G387800--Sobic009G211900 Sobic009G206600 Sobic009G206600 Sobic002G387800--Sobic009G206600 Sobic003G074900 Sobic003G074900 Sobic002G387800--Sobic003G074900 Sobic006G203900 Sobic006G203900 Sobic002G387800--Sobic006G203900 Sobic002G217500 Sobic002G217500 Sobic002G387800--Sobic002G217500 Sobic003G016300 Sobic003G016300 Sobic002G387800--Sobic003G016300 Sobic002G387800--Sobic001G192700 Sobic002G387800--Sobic008G084100 Sobic006G124300 Sobic006G124300 Sobic002G387800--Sobic006G124300 Sobic009G182200 Sobic009G182200 Sobic010G201388--Sobic009G182200 Sobic004G123000 Sobic004G123000 Sobic010G201388--Sobic004G123000 Sobic001G173300 Sobic001G173300 Sobic010G201388--Sobic001G173300 Sobic003G253500 Sobic003G253500 Sobic010G201388--Sobic003G253500 Sobic004G259600 Sobic004G259600 Sobic010G201388--Sobic004G259600 Sobic003G227200 Sobic003G227200 Sobic010G201388--Sobic003G227200 Sobic004G247200 Sobic004G247200 Sobic010G201388--Sobic004G247200 Sobic001G284400 Sobic001G284400 Sobic010G201388--Sobic001G284400 Sobic010G201388--Sobic002G113500 Sobic001G042500--Sobic001G399300 Sobic001G042500--Sobic003G146400 Sobic001G042500--Sobic006G158200 Sobic001G042500--Sobic002G113500 Sobic001G347901 Sobic001G347901 Sobic001G042500--Sobic001G347901 Sobic009G179500 Sobic009G179500 Sobic001G042500--Sobic009G179500 Sobic003G325700 Sobic003G325700 Sobic001G042500--Sobic003G325700 Sobic007G074200 Sobic007G074200 Sobic001G042500--Sobic007G074200 Sobic001G042500--Sobic002G348100 Sobic001G506300 Sobic001G506300 Sobic006G095300--Sobic001G506300 Sobic003G041400 Sobic003G041400 Sobic006G095300--Sobic003G041400 Sobic001G196800 Sobic001G196800 Sobic006G095300--Sobic001G196800 Sobic006G127200 Sobic006G127200 Sobic006G095300--Sobic006G127200 Sobic001G521100 Sobic001G521100 Sobic006G095300--Sobic001G521100 Sobic010G165800 Sobic010G165800 Sobic006G095300--Sobic010G165800 Sobic002G315400 Sobic002G315400 Sobic006G095300--Sobic002G315400 Sobic010G257500 Sobic010G257500 Sobic006G095300--Sobic010G257500 Sobic003G297200 Sobic003G297200 Sobic006G095300--Sobic003G297200 Sobic001G219800 Sobic001G219800 Sobic001G192700--Sobic001G219800 Sobic001G192700--Sobic003G016300 Sobic001G352800 Sobic001G352800 Sobic001G192700--Sobic001G352800 Sobic002G232400 Sobic002G232400 Sobic001G192700--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic001G192700--Sobic001G135200 Sobic001G348000 Sobic001G348000 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic001G192700--Sobic002G387800 Sobic001G429500--Sobic001G429000 Sobic001G429500--Sobic001G399300 Sobic003G379600 Sobic003G379600 Sobic001G429500--Sobic003G379600 Sobic004G217450 Sobic004G217450 Sobic001G429500--Sobic004G217450 Sobic001G429500--Sobic007G195800 Sobic004G285900 Sobic004G285900 Sobic001G429500--Sobic004G285900 Sobic001G505000 Sobic001G505000 Sobic001G429500--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic001G429500--Sobic001G261549 Sobic004G345500 Sobic004G345500 Sobic001G429500--Sobic004G345500 Sobic003G134500 Sobic003G134500 Sobic007G196800--Sobic003G134500 Sobic004G229200 Sobic004G229200 Sobic007G196800--Sobic004G229200 Sobic001G091500 Sobic001G091500 Sobic007G196800--Sobic001G091500 Sobic001G069700 Sobic001G069700 Sobic007G196800--Sobic001G069700 Sobic003G084100 Sobic003G084100 Sobic007G196800--Sobic003G084100 Sobic003G442300 Sobic003G442300 Sobic007G196800--Sobic003G442300 Sobic010G092400 Sobic010G092400 Sobic007G196800--Sobic010G092400 Sobic002G151400 Sobic002G151400 Sobic007G196800--Sobic002G151400 Sobic001G401600 Sobic001G401600 Sobic007G196800--Sobic001G401600 Sobic010G277000 Sobic010G277000 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic001G073600 Sobic001G073600 Sobic008G084100--Sobic001G073600 Sobic007G048700 Sobic007G048700 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic001G413100 Sobic001G413100 Sobic008G084100--Sobic001G413100 Sobic008G084100--Sobic002G232400 Sobic008G084100--Sobic006G203900
Octagon: transcription factors


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