Gene annotation
Transcriptome id Sobic.001G108500.1
Synonym Sb01g009680
Functional annotation SEC14 cytosolic factor family protein, putative, expressed
UniProt C5WM40
Pfam PF03765 PF00650
Panther DB PTHR10174 PTHR10174:SF149
NCBI CDD KOG1470; Phosphatidylinositol transfer protein PDR16 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75170 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os03g51430.2 : SEC14 cytosolic factor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007950 , Zm00025a007951
Brachypodium KQK13459
Barley HORVU2Hr1G010260.1 , HORVU2Hr1G010260.3 , HORVU2Hr1G010260.2 , HORVU4Hr1G009190.3 , HORVU4Hr1G009190.2 , HORVU4Hr1G009190.1 , HORVU6Hr1G021650.1 , HORVU6Hr1G021650.2 , HORVU5Hr1G020290.1 , HORVU5Hr1G020290.2 , HORVU5Hr1G020290.3 , HORVU5Hr1G114590.3 , HORVU5Hr1G114590.2 , HORVU5Hr1G114590.1 , HORVU3Hr1G080050.1 , HORVU4Hr1G009190.12 , HORVU4Hr1G009190.11 , HORVU4Hr1G009190.10 , HORVU4Hr1G009190.15 , HORVU4Hr1G009190.14 , HORVU4Hr1G009190.9 , HORVU4Hr1G009190.8 , HORVU4Hr1G009190.7 , HORVU4Hr1G009190.6 , HORVU4Hr1G009190.5 , HORVU4Hr1G009190.4
Wheat TraesCS4D02G055200 , TraesCS4A02G259700 , TraesCS4B02G055200 , TraesCS4B02G055000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
2 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
3 Sobic.009G103400 - -
4 Sobic.003G166500 NAD dependent epimerase/dehydratase family protein, putative, expressed -
5 Sobic.001G493400 nucleic acid binding protein, putative, expressed -
6 Sobic.003G388900 PPR repeat domain containing protein, putative, expressed -
7 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
8 Sobic.007G159700 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
9 Sobic.005G112100 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
10 Sobic.004G129100 lipase class 3 family protein, putative, expressed -
11 Sobic.002G117700 glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
12 Sobic.002G157100 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
13 Sobic.001G413100 nucleotide binding protein, putative, expressed -
14 Sobic.002G271300 NC domain-containing protein, putative, expressed -
15 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
16 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
17 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
18 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
19 Sobic.007G190100 transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
20 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G108500 Sobic001G108500 Sobic001G392200 Sobic001G392200 Sobic001G108500--Sobic001G392200 Sobic009G244900 Sobic009G244900 Sobic001G108500--Sobic009G244900 Sobic009G103400 Sobic009G103400 Sobic001G108500--Sobic009G103400 Sobic003G166500 Sobic003G166500 Sobic001G108500--Sobic003G166500 Sobic001G493400 Sobic001G493400 Sobic001G108500--Sobic001G493400 Sobic003G388900 Sobic003G388900 Sobic001G108500--Sobic003G388900 Sobic010G101600 Sobic010G101600 Sobic001G108500--Sobic010G101600 Sobic007G159700 Sobic007G159700 Sobic001G108500--Sobic007G159700 Sobic005G112100 Sobic005G112100 Sobic001G108500--Sobic005G112100 Sobic002G070300 Sobic002G070300 Sobic001G392200--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G011000 Sobic001G011000 Sobic001G392200--Sobic001G011000 Sobic002G153000 Sobic002G153000 Sobic001G392200--Sobic002G153000 Sobic001G392200--Sobic010G101600 Sobic002G101300 Sobic002G101300 Sobic001G392200--Sobic002G101300 Sobic004G218600 Sobic004G218600 Sobic001G392200--Sobic004G218600 Sobic002G186900 Sobic002G186900 Sobic001G392200--Sobic002G186900 Sobic007G192500 Sobic007G192500 Sobic009G244900--Sobic007G192500 Sobic002G201700 Sobic002G201700 Sobic009G244900--Sobic002G201700 Sobic004G261800 Sobic004G261800 Sobic009G244900--Sobic004G261800 Sobic009G244900--Sobic010G101600 Sobic002G167100 Sobic002G167100 Sobic009G244900--Sobic002G167100 Sobic009G244900--Sobic002G153000 Sobic001G135200 Sobic001G135200 Sobic009G244900--Sobic001G135200 Sobic010G250300 Sobic010G250300 Sobic009G244900--Sobic010G250300 Sobic004G069400 Sobic004G069400 Sobic009G244900--Sobic004G069400 Sobic001G239900 Sobic001G239900 Sobic009G103400--Sobic001G239900 Sobic009G103400--Sobic009G244900 Sobic008G017700 Sobic008G017700 Sobic009G103400--Sobic008G017700 Sobic009G103400--Sobic007G192500 Sobic009G103400--Sobic002G186900 Sobic009G103400--Sobic001G392200 Sobic004G032900 Sobic004G032900 Sobic009G103400--Sobic004G032900 Sobic009G219700 Sobic009G219700 Sobic009G103400--Sobic009G219700 Sobic001G261400 Sobic001G261400 Sobic009G103400--Sobic001G261400 Sobic004G037200 Sobic004G037200 Sobic003G166500--Sobic004G037200 Sobic008G072500 Sobic008G072500 Sobic003G166500--Sobic008G072500 Sobic003G202100 Sobic003G202100 Sobic003G166500--Sobic003G202100 Sobic006G017800 Sobic006G017800 Sobic003G166500--Sobic006G017800 Sobic003G048600 Sobic003G048600 Sobic003G166500--Sobic003G048600 Sobic005G018800 Sobic005G018800 Sobic003G166500--Sobic005G018800 Sobic001G115700 Sobic001G115700 Sobic003G166500--Sobic001G115700 Sobic006G106300 Sobic006G106300 Sobic003G166500--Sobic006G106300 Sobic010G133400 Sobic010G133400 Sobic003G166500--Sobic010G133400 Sobic010G134100 Sobic010G134100 Sobic001G493400--Sobic010G134100 Sobic004G002500 Sobic004G002500 Sobic001G493400--Sobic004G002500 Sobic001G214900 Sobic001G214900 Sobic001G493400--Sobic001G214900 Sobic001G167500 Sobic001G167500 Sobic001G493400--Sobic001G167500 Sobic004G082700 Sobic004G082700 Sobic001G493400--Sobic004G082700 Sobic007G108100 Sobic007G108100 Sobic001G493400--Sobic007G108100 Sobic006G254300 Sobic006G254300 Sobic001G493400--Sobic006G254300 Sobic001G228200 Sobic001G228200 Sobic001G493400--Sobic001G228200 Sobic001G371100 Sobic001G371100 Sobic001G493400--Sobic001G371100 Sobic002G367800 Sobic002G367800 Sobic003G388900--Sobic002G367800 Sobic002G402500 Sobic002G402500 Sobic003G388900--Sobic002G402500 Sobic001G522000 Sobic001G522000 Sobic003G388900--Sobic001G522000 Sobic003G388900--Sobic003G202100 Sobic004G212100 Sobic004G212100 Sobic003G388900--Sobic004G212100 Sobic001G304000 Sobic001G304000 Sobic003G388900--Sobic001G304000 Sobic002G295900 Sobic002G295900 Sobic003G388900--Sobic002G295900 Sobic001G413100 Sobic001G413100 Sobic003G388900--Sobic001G413100 Sobic003G205400 Sobic003G205400 Sobic003G388900--Sobic003G205400 Sobic010G089500 Sobic010G089500 Sobic010G101600--Sobic010G089500 Sobic004G056400 Sobic004G056400 Sobic010G101600--Sobic004G056400 Sobic003G096000 Sobic003G096000 Sobic010G101600--Sobic003G096000 Sobic009G111400 Sobic009G111400 Sobic010G101600--Sobic009G111400 Sobic001G370700 Sobic001G370700 Sobic010G101600--Sobic001G370700 Sobic001G073600 Sobic001G073600 Sobic010G101600--Sobic001G073600 Sobic010G101600--Sobic009G244900 Sobic003G261100 Sobic003G261100 Sobic010G101600--Sobic003G261100 Sobic010G101600--Sobic002G186900 Sobic007G159700--Sobic001G073600 Sobic001G282500 Sobic001G282500 Sobic007G159700--Sobic001G282500 Sobic004G155100 Sobic004G155100 Sobic007G159700--Sobic004G155100 Sobic002G395000 Sobic002G395000 Sobic007G159700--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic007G159700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic007G159700--Sobic009G191400 Sobic002G309500 Sobic002G309500 Sobic007G159700--Sobic002G309500 Sobic001G458800 Sobic001G458800 Sobic007G159700--Sobic001G458800 Sobic009G224400 Sobic009G224400 Sobic007G159700--Sobic009G224400 Sobic002G222200 Sobic002G222200 Sobic005G112100--Sobic002G222200 Sobic010G258000 Sobic010G258000 Sobic005G112100--Sobic010G258000 Sobic007G119600 Sobic007G119600 Sobic005G112100--Sobic007G119600 Sobic001G473400 Sobic001G473400 Sobic005G112100--Sobic001G473400 Sobic005G178300 Sobic005G178300 Sobic005G112100--Sobic005G178300 Sobic003G388700 Sobic003G388700 Sobic005G112100--Sobic003G388700 Sobic002G186300 Sobic002G186300 Sobic005G112100--Sobic002G186300 Sobic005G112100--Sobic001G073600 Sobic008G150300 Sobic008G150300 Sobic005G112100--Sobic008G150300
Octagon: transcription factors


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