Gene annotation
Transcriptome id Sobic.007G190100.1,Sobic.007G190100.2,Sobic.007G190100.3
Synonym MAB1, Sb07g025970
Functional annotation transketolase, putative, expressed
UniProt A0A1B6PIQ7 , A0A1B6PIL1 , A0A1B6PIJ8
Pfam PF02780 PF02779
Panther DB PTHR11624 PTHR11624:SF56
NCBI CDD -
KEGG Orthology K00162; PDHB, pyruvate dehydrogenase E1 component beta subunit
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity GO:0006086acetyl-CoA biosynthetic process from pyruvate GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity


Orthologs (automatic annotation)
TAIR AT5G50850 : Transketolase family protein
RAP-DB (Rice) LOC_Os08g42410.1 : transketolase, putative, expressed
MaizeGDB (Corn) Zm00025a014323 , Zm00025a005304
Brachypodium KQJ90948 , KQJ99159
Barley -
Wheat TraesCS7B02G161100 , TraesCS7D02G263900 , TraesCS7D02G263900
Populus -


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cDNA sequences
Sobic.007G190100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G030800 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
2 Sobic.008G150300 Lg106, putative, expressed -
3 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
4 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
6 Sobic.007G106500 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
7 Sobic.002G271300 NC domain-containing protein, putative, expressed -
8 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
9 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
10 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
11 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
12 Sobic.003G287400 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
13 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
14 Sobic.002G194800 expressed protein -
15 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
16 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
17 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
18 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
19 Sobic.009G104100 peptidase, M24 family protein, putative, expressed -
20 Sobic.002G071100 expressed protein K17408: DAP3, small subunit ribosomal protein S29


Gene co-expression network
sample Sobic007G190100 Sobic007G190100 Sobic006G030800 Sobic006G030800 Sobic007G190100--Sobic006G030800 Sobic008G150300 Sobic008G150300 Sobic007G190100--Sobic008G150300 Sobic007G120800 Sobic007G120800 Sobic007G190100--Sobic007G120800 Sobic002G383900 Sobic002G383900 Sobic007G190100--Sobic002G383900 Sobic003G169900 Sobic003G169900 Sobic007G190100--Sobic003G169900 Sobic007G106500 Sobic007G106500 Sobic007G190100--Sobic007G106500 Sobic002G271300 Sobic002G271300 Sobic007G190100--Sobic002G271300 Sobic004G212100 Sobic004G212100 Sobic007G190100--Sobic004G212100 Sobic007G119800 Sobic007G119800 Sobic007G190100--Sobic007G119800 Sobic005G115600 Sobic005G115600 Sobic006G030800--Sobic005G115600 Sobic010G213600 Sobic010G213600 Sobic006G030800--Sobic010G213600 Sobic005G100800 Sobic005G100800 Sobic006G030800--Sobic005G100800 Sobic009G058400 Sobic009G058400 Sobic006G030800--Sobic009G058400 Sobic003G020500 Sobic003G020500 Sobic006G030800--Sobic003G020500 Sobic004G008600 Sobic004G008600 Sobic006G030800--Sobic004G008600 Sobic005G134200 Sobic005G134200 Sobic006G030800--Sobic005G134200 Sobic001G218500 Sobic001G218500 Sobic006G030800--Sobic001G218500 Sobic009G060700 Sobic009G060700 Sobic006G030800--Sobic009G060700 Sobic003G170300 Sobic003G170300 Sobic008G150300--Sobic003G170300 Sobic001G281900 Sobic001G281900 Sobic008G150300--Sobic001G281900 Sobic001G338400 Sobic001G338400 Sobic008G150300--Sobic001G338400 Sobic001G458800 Sobic001G458800 Sobic008G150300--Sobic001G458800 Sobic007G161200 Sobic007G161200 Sobic008G150300--Sobic007G161200 Sobic002G410700 Sobic002G410700 Sobic008G150300--Sobic002G410700 Sobic005G105500 Sobic005G105500 Sobic008G150300--Sobic005G105500 Sobic007G159700 Sobic007G159700 Sobic008G150300--Sobic007G159700 Sobic006G211800 Sobic006G211800 Sobic008G150300--Sobic006G211800 Sobic002G408800 Sobic002G408800 Sobic007G120800--Sobic002G408800 Sobic002G029300 Sobic002G029300 Sobic007G120800--Sobic002G029300 Sobic002G194800 Sobic002G194800 Sobic007G120800--Sobic002G194800 Sobic006G056200 Sobic006G056200 Sobic007G120800--Sobic006G056200 Sobic008G156300 Sobic008G156300 Sobic007G120800--Sobic008G156300 Sobic007G173700 Sobic007G173700 Sobic007G120800--Sobic007G173700 Sobic001G161700 Sobic001G161700 Sobic007G120800--Sobic001G161700 Sobic006G259401 Sobic006G259401 Sobic007G120800--Sobic006G259401 Sobic007G065500 Sobic007G065500 Sobic007G120800--Sobic007G065500 Sobic004G161900 Sobic004G161900 Sobic002G383900--Sobic004G161900 Sobic001G263900 Sobic001G263900 Sobic002G383900--Sobic001G263900 Sobic007G020700 Sobic007G020700 Sobic002G383900--Sobic007G020700 Sobic005G022500 Sobic005G022500 Sobic002G383900--Sobic005G022500 Sobic005G219700 Sobic005G219700 Sobic002G383900--Sobic005G219700 Sobic002G383900--Sobic007G106500 Sobic001G365200 Sobic001G365200 Sobic002G383900--Sobic001G365200 Sobic002G207000 Sobic002G207000 Sobic002G383900--Sobic002G207000 Sobic001G314000 Sobic001G314000 Sobic002G383900--Sobic001G314000 Sobic008G113600 Sobic008G113600 Sobic003G169900--Sobic008G113600 Sobic003G169900--Sobic001G338400 Sobic003G169900--Sobic008G150300 Sobic003G169900--Sobic001G458800 Sobic001G077900 Sobic001G077900 Sobic003G169900--Sobic001G077900 Sobic003G196200 Sobic003G196200 Sobic003G169900--Sobic003G196200 Sobic008G072200 Sobic008G072200 Sobic003G169900--Sobic008G072200 Sobic001G458700 Sobic001G458700 Sobic003G169900--Sobic001G458700 Sobic003G348800 Sobic003G348800 Sobic003G169900--Sobic003G348800 Sobic007G038600 Sobic007G038600 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic001G238500 Sobic001G238500 Sobic007G106500--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic007G106500--Sobic004G126500 Sobic001G131001 Sobic001G131001 Sobic007G106500--Sobic001G131001 Sobic005G104200 Sobic005G104200 Sobic007G106500--Sobic005G104200 Sobic007G172500 Sobic007G172500 Sobic007G106500--Sobic007G172500 Sobic007G106500--Sobic007G020700 Sobic001G464300 Sobic001G464300 Sobic007G106500--Sobic001G464300 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic002G367800 Sobic002G367800 Sobic004G212100--Sobic002G367800 Sobic001G011000 Sobic001G011000 Sobic004G212100--Sobic001G011000 Sobic009G041800 Sobic009G041800 Sobic004G212100--Sobic009G041800 Sobic003G388900 Sobic003G388900 Sobic004G212100--Sobic003G388900 Sobic002G070300 Sobic002G070300 Sobic004G212100--Sobic002G070300 Sobic004G212100--Sobic001G161700 Sobic004G034300 Sobic004G034300 Sobic004G212100--Sobic004G034300 Sobic001G522000 Sobic001G522000 Sobic004G212100--Sobic001G522000 Sobic001G490500 Sobic001G490500 Sobic004G212100--Sobic001G490500 Sobic003G017601 Sobic003G017601 Sobic007G119800--Sobic003G017601 Sobic007G119800--Sobic001G218500 Sobic007G119800--Sobic004G161900 Sobic007G120000 Sobic007G120000 Sobic007G119800--Sobic007G120000 Sobic005G075600 Sobic005G075600 Sobic007G119800--Sobic005G075600 Sobic007G119800--Sobic003G020500 Sobic007G193200 Sobic007G193200 Sobic007G119800--Sobic007G193200 Sobic010G045400 Sobic010G045400 Sobic007G119800--Sobic010G045400 Sobic001G454900 Sobic001G454900 Sobic007G119800--Sobic001G454900
Octagon: transcription factors


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