Gene annotation
Transcriptome id Sobic.001G247800.1
Synonym
Functional annotation -
UniProt A0A1B6QKT6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.008G030400 zinc knuckle family protein, expressed -
3 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
4 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
5 Sobic.004G154600 expressed protein -
6 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
7 Sobic.010G208500 - -
8 Sobic.005G204100 kelch repeat protein, putative, expressed -
9 Sobic.002G316000 expressed protein -
10 Sobic.007G121400 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
11 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
12 Sobic.001G045700 "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA2 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.004G164650 - -
14 Sobic.001G184400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.004G199700 expressed protein -
16 Sobic.009G011500 expressed protein -
17 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
18 Sobic.001G393401 - -
19 Sobic.008G001300 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
20 Sobic.009G109101 - -


Gene co-expression network
sample Sobic001G247800 Sobic001G247800 Sobic010G091700 Sobic010G091700 Sobic001G247800--Sobic010G091700 Sobic008G030400 Sobic008G030400 Sobic001G247800--Sobic008G030400 Sobic002G367300 Sobic002G367300 Sobic001G247800--Sobic002G367300 Sobic009G259500 Sobic009G259500 Sobic001G247800--Sobic009G259500 Sobic004G154600 Sobic004G154600 Sobic001G247800--Sobic004G154600 Sobic002G216600 Sobic002G216600 Sobic001G247800--Sobic002G216600 Sobic010G208500 Sobic010G208500 Sobic001G247800--Sobic010G208500 Sobic005G204100 Sobic005G204100 Sobic001G247800--Sobic005G204100 Sobic002G316000 Sobic002G316000 Sobic001G247800--Sobic002G316000 Sobic006G020500 Sobic006G020500 Sobic010G091700--Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic010G091700--Sobic007G094600 Sobic001G184400 Sobic001G184400 Sobic010G091700--Sobic001G184400 Sobic010G091700--Sobic001G247800 Sobic002G314600 Sobic002G314600 Sobic010G091700--Sobic002G314600 Sobic010G091700--Sobic002G367300 Sobic010G091700--Sobic010G208500 Sobic006G020600 Sobic006G020600 Sobic010G091700--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic010G091700--Sobic002G051400 Sobic008G030400--Sobic001G247800 Sobic005G123900 Sobic005G123900 Sobic008G030400--Sobic005G123900 Sobic001G182000 Sobic001G182000 Sobic008G030400--Sobic001G182000 Sobic007G104300 Sobic007G104300 Sobic008G030400--Sobic007G104300 Sobic004G166301 Sobic004G166301 Sobic008G030400--Sobic004G166301 Sobic008G030400--Sobic005G204100 Sobic004G197100 Sobic004G197100 Sobic008G030400--Sobic004G197100 Sobic005G148400 Sobic005G148400 Sobic008G030400--Sobic005G148400 Sobic008G030400--Sobic010G091700 Sobic006G262600 Sobic006G262600 Sobic002G367300--Sobic006G262600 Sobic002G367300--Sobic010G091700 Sobic002G367300--Sobic001G184400 Sobic009G011500 Sobic009G011500 Sobic002G367300--Sobic009G011500 Sobic003G380500 Sobic003G380500 Sobic002G367300--Sobic003G380500 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G367300--Sobic003G174900 Sobic004G205500 Sobic004G205500 Sobic002G367300--Sobic004G205500 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic009G259500--Sobic004G154600 Sobic002G072700 Sobic002G072700 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic004G154600--Sobic009G259500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic007G210900 Sobic007G210900 Sobic004G154600--Sobic007G210900 Sobic004G154600--Sobic004G199700 Sobic004G154600--Sobic002G072700 Sobic004G154600--Sobic003G174900 Sobic004G154600--Sobic002G367300 Sobic004G154600--Sobic006G262600 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic006G132200 Sobic006G132200 Sobic010G208500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic010G208500--Sobic008G108900 Sobic003G424100 Sobic003G424100 Sobic010G208500--Sobic003G424100 Sobic002G062300 Sobic002G062300 Sobic010G208500--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic010G208500--Sobic005G212600 Sobic009G109101 Sobic009G109101 Sobic010G208500--Sobic009G109101 Sobic009G196700 Sobic009G196700 Sobic010G208500--Sobic009G196700 Sobic009G113600 Sobic009G113600 Sobic010G208500--Sobic009G113600 Sobic007G115000 Sobic007G115000 Sobic010G208500--Sobic007G115000 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic001G221900 Sobic001G221900 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic002G316000--Sobic010G208500 Sobic002G047100 Sobic002G047100 Sobic002G316000--Sobic002G047100 Sobic002G316000--Sobic004G154600 Sobic003G038000 Sobic003G038000 Sobic002G316000--Sobic003G038000 Sobic002G316000--Sobic007G115000 Sobic002G316000--Sobic001G184400 Sobic002G316000--Sobic010G091700 Sobic004G193800 Sobic004G193800 Sobic002G316000--Sobic004G193800 Sobic002G316000--Sobic003G424100
Octagon: transcription factors


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