Gene annotation
Transcriptome id Sobic.001G295500.1
Synonym Sb01g028860
Functional annotation expressed protein
UniProt C5WRH8
Pfam -
Panther DB PTHR36051 PTHR36051:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17540 : -
RAP-DB (Rice) LOC_Os10g41380.1 : expressed protein
MaizeGDB (Corn) Zm00025a051949
Brachypodium KQJ97823
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
2 Sobic.001G425000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
3 Sobic.003G417900 cullin-1, putative, expressed -
4 Sobic.005G013200 BAH domain containing protein, expressed -
5 Sobic.004G111700 tyrosine-protein phosphatase YVH1, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
6 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
7 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
8 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
9 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
10 Sobic.008G152900 MATH domain containing protein, expressed -
11 Sobic.006G258900 expressed protein -
12 Sobic.005G015900 dnaJ domain containing protein, expressed -
13 Sobic.003G202800 holocarboxylase synthetase, putative, expressed -
14 Sobic.002G299100 SET domain containing protein, expressed -
15 Sobic.003G220700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.001G106100 expressed protein -
17 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
18 Sobic.006G078600 expressed protein K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
19 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
20 Sobic.010G245000 DTW domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G295500 Sobic001G295500 Sobic001G176200 Sobic001G176200 Sobic001G295500--Sobic001G176200 Sobic001G425000 Sobic001G425000 Sobic001G295500--Sobic001G425000 Sobic003G417900 Sobic003G417900 Sobic001G295500--Sobic003G417900 Sobic005G013200 Sobic005G013200 Sobic001G295500--Sobic005G013200 Sobic004G111700 Sobic004G111700 Sobic001G295500--Sobic004G111700 Sobic006G186400 Sobic006G186400 Sobic001G295500--Sobic006G186400 Sobic008G173100 Sobic008G173100 Sobic001G295500--Sobic008G173100 Sobic006G215900 Sobic006G215900 Sobic001G295500--Sobic006G215900 Sobic005G154500 Sobic005G154500 Sobic001G295500--Sobic005G154500 Sobic001G090400 Sobic001G090400 Sobic001G176200--Sobic001G090400 Sobic002G370900 Sobic002G370900 Sobic001G176200--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic001G176200--Sobic002G197100 Sobic001G176200--Sobic005G154500 Sobic005G015900 Sobic005G015900 Sobic001G176200--Sobic005G015900 Sobic004G345700 Sobic004G345700 Sobic001G176200--Sobic004G345700 Sobic006G173100 Sobic006G173100 Sobic001G176200--Sobic006G173100 Sobic010G245000 Sobic010G245000 Sobic001G176200--Sobic010G245000 Sobic002G320500 Sobic002G320500 Sobic001G176200--Sobic002G320500 Sobic001G425000--Sobic002G197100 Sobic001G425000--Sobic001G176200 Sobic006G046700 Sobic006G046700 Sobic001G425000--Sobic006G046700 Sobic003G445400 Sobic003G445400 Sobic001G425000--Sobic003G445400 Sobic001G425000--Sobic005G015900 Sobic008G152900 Sobic008G152900 Sobic001G425000--Sobic008G152900 Sobic001G202266 Sobic001G202266 Sobic001G425000--Sobic001G202266 Sobic001G425000--Sobic006G186400 Sobic004G180900 Sobic004G180900 Sobic001G425000--Sobic004G180900 Sobic003G417900--Sobic002G197100 Sobic001G390500 Sobic001G390500 Sobic003G417900--Sobic001G390500 Sobic001G408700 Sobic001G408700 Sobic003G417900--Sobic001G408700 Sobic003G354100 Sobic003G354100 Sobic003G417900--Sobic003G354100 Sobic004G013600 Sobic004G013600 Sobic003G417900--Sobic004G013600 Sobic003G417900--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic003G417900--Sobic006G092800 Sobic003G189900 Sobic003G189900 Sobic003G417900--Sobic003G189900 Sobic008G073000 Sobic008G073000 Sobic003G417900--Sobic008G073000 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic001G222500 Sobic001G222500 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic004G084300 Sobic004G084300 Sobic005G013200--Sobic004G084300 Sobic004G111700--Sobic006G186400 Sobic002G260400 Sobic002G260400 Sobic004G111700--Sobic002G260400 Sobic003G039900 Sobic003G039900 Sobic004G111700--Sobic003G039900 Sobic004G111700--Sobic002G103600 Sobic001G066300 Sobic001G066300 Sobic004G111700--Sobic001G066300 Sobic007G103600 Sobic007G103600 Sobic004G111700--Sobic007G103600 Sobic004G111700--Sobic006G215900 Sobic007G090430 Sobic007G090430 Sobic004G111700--Sobic007G090430 Sobic010G166400 Sobic010G166400 Sobic004G111700--Sobic010G166400 Sobic008G153000 Sobic008G153000 Sobic006G186400--Sobic008G153000 Sobic006G186400--Sobic001G176200 Sobic004G067700 Sobic004G067700 Sobic006G186400--Sobic004G067700 Sobic006G186400--Sobic008G173100 Sobic007G056500 Sobic007G056500 Sobic006G186400--Sobic007G056500 Sobic006G186400--Sobic002G260400 Sobic006G186400--Sobic006G046700 Sobic003G073000 Sobic003G073000 Sobic006G186400--Sobic003G073000 Sobic006G186400--Sobic001G408700 Sobic008G173100--Sobic002G260400 Sobic008G173100--Sobic007G090430 Sobic006G116100 Sobic006G116100 Sobic008G173100--Sobic006G116100 Sobic002G063900 Sobic002G063900 Sobic008G173100--Sobic002G063900 Sobic002G264200 Sobic002G264200 Sobic008G173100--Sobic002G264200 Sobic010G236400 Sobic010G236400 Sobic008G173100--Sobic010G236400 Sobic008G173100--Sobic008G153000 Sobic001G311500 Sobic001G311500 Sobic008G173100--Sobic001G311500 Sobic008G173100--Sobic010G245000 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic006G215900--Sobic004G111700 Sobic006G215900--Sobic002G103600 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic005G154500--Sobic001G176200 Sobic005G154500--Sobic004G345700 Sobic003G241200 Sobic003G241200 Sobic005G154500--Sobic003G241200 Sobic005G154500--Sobic010G245000 Sobic005G154500--Sobic008G149800 Sobic005G154500--Sobic008G173100 Sobic005G154500--Sobic005G015900 Sobic002G357700 Sobic002G357700 Sobic005G154500--Sobic002G357700 Sobic005G154500--Sobic006G116100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.