Gene annotation
Transcriptome id Sobic.001G302800.1
Synonym CHL1, Sb01g029470, NRT1, ATNRT1, NRT1.1, CHL1-1, B-1
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5WSH8
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF136
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G12110 : nitrate transporter 1.1
RAP-DB (Rice) LOC_Os10g40600.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a055174 , Zm00025a028806 , Zm00025a003351 , Zm00025a033786 , Zm00025a026649 , Zm00025a036455 , Zm00025a000114
Brachypodium KQJ97753 , KQJ97754 , KQK24132 , KQJ95347
Barley HORVU1Hr1G053990.9 , HORVU1Hr1G053990.8 , HORVU7Hr1G071600.9 , HORVU7Hr1G071600.8 , HORVU7Hr1G071600.2 , HORVU7Hr1G071600.7 , HORVU7Hr1G071600.6 , HORVU7Hr1G071600.5 , HORVU4Hr1G088020.12 , HORVU4Hr1G088020.13 , HORVU4Hr1G088020.4 , HORVU4Hr1G088020.5 , HORVU4Hr1G088020.6 , HORVU4Hr1G088020.7 , HORVU4Hr1G088020.1 , HORVU4Hr1G088020.2 , HORVU4Hr1G088020.3 , HORVU4Hr1G088020.8 , HORVU4Hr1G088020.9 , HORVU4Hr1G088020.10 , HORVU4Hr1G088020.11 , HORVU1Hr1G053990.10 , HORVU1Hr1G054000.1 , HORVU7Hr1G071600.12 , HORVU7Hr1G071600.11 , HORVU7Hr1G071600.10 , HORVU1Hr1G054020.4 , HORVU1Hr1G054020.5 , HORVU1Hr1G054020.2 , HORVU1Hr1G054020.3 , HORVU1Hr1G053990.1 , HORVU1Hr1G053990.3 , HORVU1Hr1G053990.2 , HORVU1Hr1G053990.5 , HORVU1Hr1G053990.4 , HORVU1Hr1G053990.7 , HORVU1Hr1G053990.6
Wheat TraesCS3A02G382200 , TraesCS3A02G382200 , TraesCS4B02G371000 , TraesCS5D02G419200 , TraesCS5D02G419200 , TraesCS7D02G297000 , TraesCS1B02G224900 , TraesCS7B02G201900 , TraesCS4B02G375800 , TraesCS1A02G211000 , TraesCS5A02G537100 , TraesCS1A02G210900 , TraesCS7A02G301700 , TraesCS3B02G414800 , TraesCS2B02G626100 , TraesCS1D02G214300 , TraesCS3D02G375900 , TraesCS3B02G414900 , TraesCS3D02G375800 , TraesCS2B02G626600 , TraesCS1D02G214200 , TraesCS3B02G414800 , TraesCS1B02G225000 , TraesCS3B02G304500 , TraesCS3A02G382100 , TraesCS4D02G361500
Populus -


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cDNA sequences
Sobic.001G302800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G186400 Leucine-rich repeat transmembrane protein kinase family protein(PubMedID : 26465154)@receptor-like protein kinase HAIKU2 precursor, putative, expressed -
2 Sobic.007G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
3 Sobic.006G143100 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
4 Sobic.009G122350 - -
5 Sobic.010G267700 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.003G229600 siroheme synthase, putative, expressed -
7 Sobic.006G002900 zinc finger, C3HC4 type, domain containing protein, expressed -
8 Sobic.003G349200 cation efflux family protein, putative, expressed -
9 Sobic.004G073500 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by BR treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.005G194300 proline-rich protein, putative, expressed -
11 Sobic.001G042901 - K10760: adenylate dimethylallyltransferase (cytokinin synthase)
12 Sobic.002G367100 protein of unknown function DUF1675 domain containing protein, expressed -
13 Sobic.008G072700 expressed protein -
14 Sobic.001G325700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
15 Sobic.003G029200 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
16 Sobic.002G207400 auxin-induced protein 5NG4, putative, expressed -
17 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
18 Sobic.004G097000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@F-box family protein, putative, expressed -
19 Sobic.001G302200 glycosyl transferase 8 domain containing protein, putative, expressed -
20 Sobic.005G086300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ANTH domain containing protein, expressed -


Gene co-expression network
sample Sobic001G302800 Sobic001G302800 Sobic008G186400 Sobic008G186400 Sobic001G302800--Sobic008G186400 Sobic007G153900 Sobic007G153900 Sobic001G302800--Sobic007G153900 Sobic006G143100 Sobic006G143100 Sobic001G302800--Sobic006G143100 Sobic009G122350 Sobic009G122350 Sobic001G302800--Sobic009G122350 Sobic010G267700 Sobic010G267700 Sobic001G302800--Sobic010G267700 Sobic003G229600 Sobic003G229600 Sobic001G302800--Sobic003G229600 Sobic006G002900 Sobic006G002900 Sobic001G302800--Sobic006G002900 Sobic003G349200 Sobic003G349200 Sobic001G302800--Sobic003G349200 Sobic004G073500 Sobic004G073500 Sobic001G302800--Sobic004G073500 Sobic010G241300 Sobic010G241300 Sobic008G186400--Sobic010G241300 Sobic003G397200 Sobic003G397200 Sobic008G186400--Sobic003G397200 Sobic008G186400--Sobic010G267700 Sobic005G111500 Sobic005G111500 Sobic008G186400--Sobic005G111500 Sobic001G006400 Sobic001G006400 Sobic008G186400--Sobic001G006400 Sobic002G102200 Sobic002G102200 Sobic008G186400--Sobic002G102200 Sobic001G168800 Sobic001G168800 Sobic008G186400--Sobic001G168800 Sobic007G059500 Sobic007G059500 Sobic008G186400--Sobic007G059500 Sobic004G227200 Sobic004G227200 Sobic008G186400--Sobic004G227200 Sobic003G372400 Sobic003G372400 Sobic007G153900--Sobic003G372400 Sobic005G089600 Sobic005G089600 Sobic007G153900--Sobic005G089600 Sobic003G371250 Sobic003G371250 Sobic007G153900--Sobic003G371250 Sobic002G402700 Sobic002G402700 Sobic007G153900--Sobic002G402700 Sobic006G093100 Sobic006G093100 Sobic007G153900--Sobic006G093100 Sobic001G183000 Sobic001G183000 Sobic007G153900--Sobic001G183000 Sobic001G521200 Sobic001G521200 Sobic007G153900--Sobic001G521200 Sobic004G006400 Sobic004G006400 Sobic007G153900--Sobic004G006400 Sobic002G005600 Sobic002G005600 Sobic007G153900--Sobic002G005600 Sobic002G352100 Sobic002G352100 Sobic006G143100--Sobic002G352100 Sobic004G235200 Sobic004G235200 Sobic006G143100--Sobic004G235200 Sobic007G136900 Sobic007G136900 Sobic006G143100--Sobic007G136900 Sobic001G046900 Sobic001G046900 Sobic006G143100--Sobic001G046900 Sobic010G189300 Sobic010G189300 Sobic006G143100--Sobic010G189300 Sobic001G177000 Sobic001G177000 Sobic006G143100--Sobic001G177000 Sobic005G087000 Sobic005G087000 Sobic006G143100--Sobic005G087000 Sobic008G063500 Sobic008G063500 Sobic006G143100--Sobic008G063500 Sobic007G223500 Sobic007G223500 Sobic006G143100--Sobic007G223500 Sobic009G122350--Sobic001G302800 Sobic008G006350 Sobic008G006350 Sobic009G122350--Sobic008G006350 Sobic001G260850 Sobic001G260850 Sobic009G122350--Sobic001G260850 Sobic002G207400 Sobic002G207400 Sobic009G122350--Sobic002G207400 Sobic005G204000 Sobic005G204000 Sobic009G122350--Sobic005G204000 Sobic005G194300 Sobic005G194300 Sobic009G122350--Sobic005G194300 Sobic008G117300 Sobic008G117300 Sobic009G122350--Sobic008G117300 Sobic001G048600 Sobic001G048600 Sobic009G122350--Sobic001G048600 Sobic004G340800 Sobic004G340800 Sobic009G122350--Sobic004G340800 Sobic010G267700--Sobic008G186400 Sobic002G367100 Sobic002G367100 Sobic010G267700--Sobic002G367100 Sobic003G375900 Sobic003G375900 Sobic010G267700--Sobic003G375900 Sobic003G403500 Sobic003G403500 Sobic010G267700--Sobic003G403500 Sobic010G267700--Sobic006G002900 Sobic010G267700--Sobic003G397200 Sobic003G263001 Sobic003G263001 Sobic010G267700--Sobic003G263001 Sobic005G012200 Sobic005G012200 Sobic010G267700--Sobic005G012200 Sobic003G422700 Sobic003G422700 Sobic010G267700--Sobic003G422700 Sobic004G309300 Sobic004G309300 Sobic003G229600--Sobic004G309300 Sobic003G029200 Sobic003G029200 Sobic003G229600--Sobic003G029200 Sobic003G229600--Sobic007G153900 Sobic003G229600--Sobic006G143100 Sobic001G302200 Sobic001G302200 Sobic003G229600--Sobic001G302200 Sobic001G011700 Sobic001G011700 Sobic003G229600--Sobic001G011700 Sobic003G229600--Sobic001G521200 Sobic006G168650 Sobic006G168650 Sobic003G229600--Sobic006G168650 Sobic010G160700 Sobic010G160700 Sobic003G229600--Sobic010G160700 Sobic006G002900--Sobic010G267700 Sobic002G201900 Sobic002G201900 Sobic006G002900--Sobic002G201900 Sobic006G002900--Sobic004G340800 Sobic002G200700 Sobic002G200700 Sobic006G002900--Sobic002G200700 Sobic007G062200 Sobic007G062200 Sobic006G002900--Sobic007G062200 Sobic010G102800 Sobic010G102800 Sobic006G002900--Sobic010G102800 Sobic006G002900--Sobic008G186400 Sobic005G142700 Sobic005G142700 Sobic006G002900--Sobic005G142700 Sobic003G246200 Sobic003G246200 Sobic006G002900--Sobic003G246200 Sobic001G339500 Sobic001G339500 Sobic003G349200--Sobic001G339500 Sobic008G033200 Sobic008G033200 Sobic003G349200--Sobic008G033200 Sobic002G401900 Sobic002G401900 Sobic003G349200--Sobic002G401900 Sobic006G011300 Sobic006G011300 Sobic003G349200--Sobic006G011300 Sobic006G215600 Sobic006G215600 Sobic003G349200--Sobic006G215600 Sobic002G232200 Sobic002G232200 Sobic003G349200--Sobic002G232200 Sobic002G339600 Sobic002G339600 Sobic003G349200--Sobic002G339600 Sobic006G120500 Sobic006G120500 Sobic003G349200--Sobic006G120500 Sobic001G073900 Sobic001G073900 Sobic003G349200--Sobic001G073900 Sobic003G266500 Sobic003G266500 Sobic004G073500--Sobic003G266500 Sobic004G097000 Sobic004G097000 Sobic004G073500--Sobic004G097000 Sobic001G439200 Sobic001G439200 Sobic004G073500--Sobic001G439200 Sobic010G019700 Sobic010G019700 Sobic004G073500--Sobic010G019700 Sobic004G073500--Sobic008G186400 Sobic008G068200 Sobic008G068200 Sobic004G073500--Sobic008G068200 Sobic010G023700 Sobic010G023700 Sobic004G073500--Sobic010G023700 Sobic006G147300 Sobic006G147300 Sobic004G073500--Sobic006G147300 Sobic003G431900 Sobic003G431900 Sobic004G073500--Sobic003G431900
Octagon: transcription factors


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