Gene annotation
Transcriptome id Sobic.001G304600.2
Synonym
Functional annotation -
UniProt A0A1Z5S8B6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G066000 - -
2 Sobic.008G090300 - -
3 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
4 Sobic.001G242300 expressed protein -
5 Sobic.003G061000 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
6 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
7 Sobic.002G115500 PHD finger protein, putative, expressed -
8 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
9 Sobic.001G018100 "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
10 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
11 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
12 Sobic.002G416150 - -
13 Sobic.010G190900 pentatricopeptide, putative, expressed -
14 Sobic.003G205100 helicase, putative, expressed K11136: regulator of telomere elongation helicase 1
15 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
16 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
17 Sobic.008G000600 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
18 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
19 Sobic.003G067201 - -
20 Sobic.001G090300 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin


Gene co-expression network
sample Sobic001G304600 Sobic001G304600 Sobic006G066000 Sobic006G066000 Sobic001G304600--Sobic006G066000 Sobic008G090300 Sobic008G090300 Sobic001G304600--Sobic008G090300 Sobic003G397100 Sobic003G397100 Sobic001G304600--Sobic003G397100 Sobic001G242300 Sobic001G242300 Sobic001G304600--Sobic001G242300 Sobic003G061000 Sobic003G061000 Sobic001G304600--Sobic003G061000 Sobic009G040800 Sobic009G040800 Sobic001G304600--Sobic009G040800 Sobic002G115500 Sobic002G115500 Sobic001G304600--Sobic002G115500 Sobic006G091000 Sobic006G091000 Sobic001G304600--Sobic006G091000 Sobic001G018100 Sobic001G018100 Sobic001G304600--Sobic001G018100 Sobic006G066000--Sobic008G090300 Sobic006G067100 Sobic006G067100 Sobic006G066000--Sobic006G067100 Sobic005G128000 Sobic005G128000 Sobic006G066000--Sobic005G128000 Sobic005G099200 Sobic005G099200 Sobic006G066000--Sobic005G099200 Sobic008G084401 Sobic008G084401 Sobic006G066000--Sobic008G084401 Sobic008G099500 Sobic008G099500 Sobic006G066000--Sobic008G099500 Sobic008G110800 Sobic008G110800 Sobic006G066000--Sobic008G110800 Sobic004G291700 Sobic004G291700 Sobic006G066000--Sobic004G291700 Sobic001G261537 Sobic001G261537 Sobic006G066000--Sobic001G261537 Sobic008G090300--Sobic008G099500 Sobic008G090300--Sobic003G397100 Sobic008G090300--Sobic006G066000 Sobic004G189700 Sobic004G189700 Sobic008G090300--Sobic004G189700 Sobic008G090300--Sobic008G084401 Sobic008G090400 Sobic008G090400 Sobic008G090300--Sobic008G090400 Sobic010G237650 Sobic010G237650 Sobic008G090300--Sobic010G237650 Sobic008G169400 Sobic008G169400 Sobic008G090300--Sobic008G169400 Sobic007G070300 Sobic007G070300 Sobic008G090300--Sobic007G070300 Sobic003G397100--Sobic001G242300 Sobic002G123600 Sobic002G123600 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic003G397100--Sobic008G090300 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic010G143600 Sobic010G143600 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic001G242300--Sobic003G397100 Sobic006G262700 Sobic006G262700 Sobic001G242300--Sobic006G262700 Sobic001G242300--Sobic002G123600 Sobic004G256900 Sobic004G256900 Sobic001G242300--Sobic004G256900 Sobic001G242300--Sobic008G169400 Sobic003G331000 Sobic003G331000 Sobic001G242300--Sobic003G331000 Sobic001G361200 Sobic001G361200 Sobic001G242300--Sobic001G361200 Sobic009G120400 Sobic009G120400 Sobic001G242300--Sobic009G120400 Sobic006G237500 Sobic006G237500 Sobic001G242300--Sobic006G237500 Sobic010G143200 Sobic010G143200 Sobic003G061000--Sobic010G143200 Sobic002G095900 Sobic002G095900 Sobic003G061000--Sobic002G095900 Sobic007G000400 Sobic007G000400 Sobic003G061000--Sobic007G000400 Sobic003G061000--Sobic006G066000 Sobic001G261496 Sobic001G261496 Sobic003G061000--Sobic001G261496 Sobic008G091671 Sobic008G091671 Sobic003G061000--Sobic008G091671 Sobic003G159450 Sobic003G159450 Sobic003G061000--Sobic003G159450 Sobic007G112900 Sobic007G112900 Sobic003G061000--Sobic007G112900 Sobic008G056900 Sobic008G056900 Sobic003G061000--Sobic008G056900 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic002G115500--Sobic009G040800 Sobic009G000400 Sobic009G000400 Sobic002G115500--Sobic009G000400 Sobic009G260650 Sobic009G260650 Sobic002G115500--Sobic009G260650 Sobic006G281700 Sobic006G281700 Sobic002G115500--Sobic006G281700 Sobic002G115500--Sobic005G040900 Sobic009G122500 Sobic009G122500 Sobic002G115500--Sobic009G122500 Sobic003G240700 Sobic003G240700 Sobic002G115500--Sobic003G240700 Sobic006G224300 Sobic006G224300 Sobic002G115500--Sobic006G224300 Sobic004G345400 Sobic004G345400 Sobic002G115500--Sobic004G345400 Sobic006G091000--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic006G091000--Sobic005G178950 Sobic006G091000--Sobic004G353400 Sobic006G091000--Sobic005G040900 Sobic004G347100 Sobic004G347100 Sobic006G091000--Sobic004G347100 Sobic010G074900 Sobic010G074900 Sobic006G091000--Sobic010G074900 Sobic007G139400 Sobic007G139400 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic005G114400 Sobic005G114400 Sobic006G091000--Sobic005G114400 Sobic002G427800 Sobic002G427800 Sobic001G018100--Sobic002G427800 Sobic001G315400 Sobic001G315400 Sobic001G018100--Sobic001G315400 Sobic004G086200 Sobic004G086200 Sobic001G018100--Sobic004G086200 Sobic006G180700 Sobic006G180700 Sobic001G018100--Sobic006G180700 Sobic001G245900 Sobic001G245900 Sobic001G018100--Sobic001G245900 Sobic002G148400 Sobic002G148400 Sobic001G018100--Sobic002G148400 Sobic001G018100--Sobic005G114400 Sobic006G131200 Sobic006G131200 Sobic001G018100--Sobic006G131200 Sobic001G018100--Sobic006G091000
Octagon: transcription factors


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