Gene annotation
Transcriptome id Sobic.001G305350.2,Sobic.001G305350.1,Sobic.001G305350.3,Sobic.001G305350.4
Synonym -
Functional annotation -
UniProt A0A1Z5S8M4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063500 - -
2 Sobic.006G216300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.010G182300 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
5 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
6 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
7 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
8 Sobic.004G325700 CYPRO4, putative, expressed -
9 Sobic.001G526200 homeobox protein knotted-1, putative, expressed -
10 Sobic.008G161000 protein kinase domain containing protein, expressed -
11 Sobic.009G011901 - -
12 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.003G343900 expressed protein -
14 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
15 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
16 Sobic.010G144400 glycosyltransferase, putative, expressed -
17 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
18 Sobic.003G305601 - -
19 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
20 Sobic.002G259000 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae


Gene co-expression network
sample Sobic001G305350 Sobic001G305350 Sobic005G063500 Sobic005G063500 Sobic001G305350--Sobic005G063500 Sobic006G216300 Sobic006G216300 Sobic001G305350--Sobic006G216300 Sobic003G108200 Sobic003G108200 Sobic001G305350--Sobic003G108200 Sobic010G182300 Sobic010G182300 Sobic001G305350--Sobic010G182300 Sobic002G022400 Sobic002G022400 Sobic001G305350--Sobic002G022400 Sobic004G152700 Sobic004G152700 Sobic001G305350--Sobic004G152700 Sobic004G152400 Sobic004G152400 Sobic001G305350--Sobic004G152400 Sobic004G325700 Sobic004G325700 Sobic001G305350--Sobic004G325700 Sobic001G526200 Sobic001G526200 Sobic001G305350--Sobic001G526200 Sobic008G030100 Sobic008G030100 Sobic005G063500--Sobic008G030100 Sobic007G061300 Sobic007G061300 Sobic005G063500--Sobic007G061300 Sobic002G326100 Sobic002G326100 Sobic005G063500--Sobic002G326100 Sobic001G015100 Sobic001G015100 Sobic005G063500--Sobic001G015100 Sobic001G330500 Sobic001G330500 Sobic005G063500--Sobic001G330500 Sobic002G330000 Sobic002G330000 Sobic005G063500--Sobic002G330000 Sobic004G088551 Sobic004G088551 Sobic005G063500--Sobic004G088551 Sobic001G187200 Sobic001G187200 Sobic005G063500--Sobic001G187200 Sobic010G066601 Sobic010G066601 Sobic005G063500--Sobic010G066601 Sobic002G210300 Sobic002G210300 Sobic006G216300--Sobic002G210300 Sobic002G379400 Sobic002G379400 Sobic006G216300--Sobic002G379400 Sobic006G216300--Sobic003G108200 Sobic002G294700 Sobic002G294700 Sobic006G216300--Sobic002G294700 Sobic002G272900 Sobic002G272900 Sobic006G216300--Sobic002G272900 Sobic001G051800 Sobic001G051800 Sobic006G216300--Sobic001G051800 Sobic003G338900 Sobic003G338900 Sobic006G216300--Sobic003G338900 Sobic001G483400 Sobic001G483400 Sobic006G216300--Sobic001G483400 Sobic004G036600 Sobic004G036600 Sobic006G216300--Sobic004G036600 Sobic010G238800 Sobic010G238800 Sobic003G108200--Sobic010G238800 Sobic010G225100 Sobic010G225100 Sobic003G108200--Sobic010G225100 Sobic003G108200--Sobic001G526200 Sobic003G108200--Sobic002G272900 Sobic003G108200--Sobic004G325700 Sobic008G161000 Sobic008G161000 Sobic003G108200--Sobic008G161000 Sobic004G257300 Sobic004G257300 Sobic003G108200--Sobic004G257300 Sobic003G108200--Sobic004G152400 Sobic009G065000 Sobic009G065000 Sobic003G108200--Sobic009G065000 Sobic002G258800 Sobic002G258800 Sobic010G182300--Sobic002G258800 Sobic002G259000 Sobic002G259000 Sobic010G182300--Sobic002G259000 Sobic010G182300--Sobic004G152700 Sobic004G103800 Sobic004G103800 Sobic010G182300--Sobic004G103800 Sobic010G259900 Sobic010G259900 Sobic010G182300--Sobic010G259900 Sobic001G046300 Sobic001G046300 Sobic010G182300--Sobic001G046300 Sobic010G260100 Sobic010G260100 Sobic010G182300--Sobic010G260100 Sobic009G065400 Sobic009G065400 Sobic010G182300--Sobic009G065400 Sobic010G182600 Sobic010G182600 Sobic010G182300--Sobic010G182600 Sobic003G249800 Sobic003G249800 Sobic002G022400--Sobic003G249800 Sobic002G022400--Sobic002G330000 Sobic002G022400--Sobic008G161000 Sobic005G092800 Sobic005G092800 Sobic002G022400--Sobic005G092800 Sobic003G321700 Sobic003G321700 Sobic002G022400--Sobic003G321700 Sobic002G022400--Sobic004G152700 Sobic010G204600 Sobic010G204600 Sobic002G022400--Sobic010G204600 Sobic001G422900 Sobic001G422900 Sobic002G022400--Sobic001G422900 Sobic005G157200 Sobic005G157200 Sobic002G022400--Sobic005G157200 Sobic004G152700--Sobic004G103800 Sobic004G152700--Sobic002G259000 Sobic004G104100 Sobic004G104100 Sobic004G152700--Sobic004G104100 Sobic010G230700 Sobic010G230700 Sobic004G152700--Sobic010G230700 Sobic004G152700--Sobic010G182300 Sobic006G221200 Sobic006G221200 Sobic004G152700--Sobic006G221200 Sobic004G104300 Sobic004G104300 Sobic004G152700--Sobic004G104300 Sobic004G145801 Sobic004G145801 Sobic004G152700--Sobic004G145801 Sobic004G152700--Sobic010G259900 Sobic004G152400--Sobic002G258800 Sobic004G152400--Sobic004G152700 Sobic004G152400--Sobic002G259000 Sobic004G152400--Sobic010G182300 Sobic004G152400--Sobic004G103800 Sobic003G107600 Sobic003G107600 Sobic004G152400--Sobic003G107600 Sobic001G505100 Sobic001G505100 Sobic004G152400--Sobic001G505100 Sobic010G029400 Sobic010G029400 Sobic004G152400--Sobic010G029400 Sobic004G152400--Sobic010G259900 Sobic004G325700--Sobic008G161000 Sobic006G179500 Sobic006G179500 Sobic004G325700--Sobic006G179500 Sobic003G181500 Sobic003G181500 Sobic004G325700--Sobic003G181500 Sobic002G140300 Sobic002G140300 Sobic004G325700--Sobic002G140300 Sobic004G325700--Sobic003G249800 Sobic001G304700 Sobic001G304700 Sobic004G325700--Sobic001G304700 Sobic009G033700 Sobic009G033700 Sobic004G325700--Sobic009G033700 Sobic001G095300 Sobic001G095300 Sobic004G325700--Sobic001G095300 Sobic006G062800 Sobic006G062800 Sobic004G325700--Sobic006G062800 Sobic001G526200--Sobic003G108200 Sobic003G270300 Sobic003G270300 Sobic001G526200--Sobic003G270300 Sobic001G526200--Sobic002G210300 Sobic010G200700 Sobic010G200700 Sobic001G526200--Sobic010G200700 Sobic003G373000 Sobic003G373000 Sobic001G526200--Sobic003G373000 Sobic001G429900 Sobic001G429900 Sobic001G526200--Sobic001G429900 Sobic001G217000 Sobic001G217000 Sobic001G526200--Sobic001G217000 Sobic001G526200--Sobic010G238800 Sobic003G012800 Sobic003G012800 Sobic001G526200--Sobic003G012800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.