Gene annotation
Transcriptome id Sobic.001G340600.1,Sobic.001G340600.2,Sobic.001G340600.4,Sobic.001G340600.3
Synonym Sb01g032740
Functional annotation expressed protein
UniProt A0A1B6QMN1 , C5WWN2 , A0A1Z5S9A7 , A0A1Z5S913
Pfam PF13460
Panther DB PTHR14194 PTHR14194:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72640 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g29730.1 : expressed protein
MaizeGDB (Corn) Zm00025a002825
Brachypodium KQK21311
Barley HORVU6Hr1G009170.23 , HORVU6Hr1G009170.20 , HORVU6Hr1G009170.21 , HORVU6Hr1G009170.26 , HORVU6Hr1G009170.24 , HORVU6Hr1G009170.25 , HORVU6Hr1G009170.9 , HORVU6Hr1G009170.8 , HORVU6Hr1G009170.3 , HORVU6Hr1G009170.2 , HORVU6Hr1G009170.1 , HORVU6Hr1G009170.5 , HORVU6Hr1G009170.4 , HORVU6Hr1G009170.13 , HORVU6Hr1G009170.11 , HORVU6Hr1G009170.17 , HORVU6Hr1G009170.16 , HORVU6Hr1G009170.15 , HORVU6Hr1G009170.14 , HORVU6Hr1G009170.10
Wheat TraesCS6B02G060200 , TraesCS6B02G060200 , TraesCS6A02G045300 , TraesCS6A02G045300 , TraesCS6D02G051300 , TraesCS6D02G051300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G223700 OsRhmbd15 - Putative Rhomboid homologue, expressed -
2 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
3 Sobic.010G042400 -(PubMedID : 26465154)@expressed protein -
4 Sobic.010G201600 tic21, putative, expressed -
5 Sobic.007G173800 uncharacterized protein ycf39, putative, expressed -
6 Sobic.007G130400 FAD dependent oxidoreductase, putative, expressed -
7 Sobic.007G225500 expressed protein -
8 Sobic.010G035400 expressed protein -
9 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
12 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
13 Sobic.002G405100 elongation factor TS family protein, expressed K02357: tsf, elongation factor Ts
14 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
15 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
16 Sobic.009G043000 thioredoxin, putative, expressed -
17 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
18 Sobic.007G181400 TraB family protein, putative, expressed -
19 Sobic.004G028300 expressed protein -
20 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -


Gene co-expression network
sample Sobic001G340600 Sobic001G340600 Sobic002G223700 Sobic002G223700 Sobic001G340600--Sobic002G223700 Sobic004G359600 Sobic004G359600 Sobic001G340600--Sobic004G359600 Sobic010G042400 Sobic010G042400 Sobic001G340600--Sobic010G042400 Sobic010G201600 Sobic010G201600 Sobic001G340600--Sobic010G201600 Sobic007G173800 Sobic007G173800 Sobic001G340600--Sobic007G173800 Sobic007G130400 Sobic007G130400 Sobic001G340600--Sobic007G130400 Sobic007G225500 Sobic007G225500 Sobic001G340600--Sobic007G225500 Sobic010G035400 Sobic010G035400 Sobic001G340600--Sobic010G035400 Sobic006G238200 Sobic006G238200 Sobic001G340600--Sobic006G238200 Sobic006G235350 Sobic006G235350 Sobic002G223700--Sobic006G235350 Sobic006G102000 Sobic006G102000 Sobic002G223700--Sobic006G102000 Sobic002G223700--Sobic010G035400 Sobic007G108900 Sobic007G108900 Sobic002G223700--Sobic007G108900 Sobic002G275300 Sobic002G275300 Sobic002G223700--Sobic002G275300 Sobic003G005000 Sobic003G005000 Sobic002G223700--Sobic003G005000 Sobic009G132000 Sobic009G132000 Sobic002G223700--Sobic009G132000 Sobic002G223700--Sobic007G225500 Sobic007G103400 Sobic007G103400 Sobic002G223700--Sobic007G103400 Sobic004G359600--Sobic007G173800 Sobic001G167900 Sobic001G167900 Sobic004G359600--Sobic001G167900 Sobic008G102000 Sobic008G102000 Sobic004G359600--Sobic008G102000 Sobic007G181400 Sobic007G181400 Sobic004G359600--Sobic007G181400 Sobic003G378600 Sobic003G378600 Sobic004G359600--Sobic003G378600 Sobic006G265900 Sobic006G265900 Sobic004G359600--Sobic006G265900 Sobic001G005200 Sobic001G005200 Sobic004G359600--Sobic001G005200 Sobic008G172700 Sobic008G172700 Sobic004G359600--Sobic008G172700 Sobic009G140600 Sobic009G140600 Sobic004G359600--Sobic009G140600 Sobic003G230400 Sobic003G230400 Sobic010G042400--Sobic003G230400 Sobic010G042400--Sobic006G238200 Sobic003G419900 Sobic003G419900 Sobic010G042400--Sobic003G419900 Sobic003G398800 Sobic003G398800 Sobic010G042400--Sobic003G398800 Sobic002G370600 Sobic002G370600 Sobic010G042400--Sobic002G370600 Sobic003G408000 Sobic003G408000 Sobic010G042400--Sobic003G408000 Sobic003G431700 Sobic003G431700 Sobic010G042400--Sobic003G431700 Sobic004G308700 Sobic004G308700 Sobic010G042400--Sobic004G308700 Sobic003G367500 Sobic003G367500 Sobic010G042400--Sobic003G367500 Sobic005G100300 Sobic005G100300 Sobic010G201600--Sobic005G100300 Sobic002G405100 Sobic002G405100 Sobic010G201600--Sobic002G405100 Sobic001G128600 Sobic001G128600 Sobic010G201600--Sobic001G128600 Sobic002G133900 Sobic002G133900 Sobic010G201600--Sobic002G133900 Sobic002G233700 Sobic002G233700 Sobic010G201600--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic010G201600--Sobic002G401800 Sobic004G303200 Sobic004G303200 Sobic010G201600--Sobic004G303200 Sobic007G052400 Sobic007G052400 Sobic010G201600--Sobic007G052400 Sobic003G094350 Sobic003G094350 Sobic010G201600--Sobic003G094350 Sobic007G173800--Sobic008G102000 Sobic007G173800--Sobic004G359600 Sobic007G173800--Sobic007G225500 Sobic009G043000 Sobic009G043000 Sobic007G173800--Sobic009G043000 Sobic010G277600 Sobic010G277600 Sobic007G173800--Sobic010G277600 Sobic003G002300 Sobic003G002300 Sobic007G173800--Sobic003G002300 Sobic009G183700 Sobic009G183700 Sobic007G173800--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic007G173800--Sobic002G277100 Sobic007G173800--Sobic006G238200 Sobic007G130400--Sobic001G167900 Sobic006G063900 Sobic006G063900 Sobic007G130400--Sobic006G063900 Sobic007G130400--Sobic004G359600 Sobic003G058700 Sobic003G058700 Sobic007G130400--Sobic003G058700 Sobic002G351600 Sobic002G351600 Sobic007G130400--Sobic002G351600 Sobic004G028300 Sobic004G028300 Sobic007G130400--Sobic004G028300 Sobic004G124400 Sobic004G124400 Sobic007G130400--Sobic004G124400 Sobic006G108200 Sobic006G108200 Sobic007G130400--Sobic006G108200 Sobic007G130400--Sobic007G225500 Sobic007G225500--Sobic003G002300 Sobic007G225500--Sobic010G035400 Sobic007G225500--Sobic008G102000 Sobic007G225500--Sobic007G052400 Sobic008G171300 Sobic008G171300 Sobic007G225500--Sobic008G171300 Sobic007G225500--Sobic009G043000 Sobic007G225500--Sobic002G275300 Sobic006G077400 Sobic006G077400 Sobic007G225500--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic007G225500--Sobic010G201700 Sobic010G035400--Sobic007G103400 Sobic010G035400--Sobic007G225500 Sobic004G336200 Sobic004G336200 Sobic010G035400--Sobic004G336200 Sobic004G353100 Sobic004G353100 Sobic010G035400--Sobic004G353100 Sobic009G237000 Sobic009G237000 Sobic010G035400--Sobic009G237000 Sobic010G035400--Sobic002G275300 Sobic003G160800 Sobic003G160800 Sobic010G035400--Sobic003G160800 Sobic006G207800 Sobic006G207800 Sobic010G035400--Sobic006G207800 Sobic003G387100 Sobic003G387100 Sobic010G035400--Sobic003G387100 Sobic001G491000 Sobic001G491000 Sobic006G238200--Sobic001G491000 Sobic006G238200--Sobic002G275300 Sobic010G181300 Sobic010G181300 Sobic006G238200--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic006G238200--Sobic001G100000 Sobic009G237100 Sobic009G237100 Sobic006G238200--Sobic009G237100 Sobic006G238200--Sobic003G398800 Sobic001G289500 Sobic001G289500 Sobic006G238200--Sobic001G289500 Sobic006G238200--Sobic002G370600 Sobic006G238200--Sobic007G225500
Octagon: transcription factors


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