Gene annotation
Transcriptome id Sobic.001G414400.2,Sobic.001G414400.1
Synonym Sb01g039030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ankyrin repeat-containing protein, putative, expressed
UniProt C5WPA1
Pfam PF13962 PF13637 PF12796
Panther DB PTHR24186 PTHR24186:SF4
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10 KOG0508Ankyrin repeat protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07710 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os03g17250.1 : ankyrin repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001896
Brachypodium KQK22276
Barley HORVU4Hr1G058450.8 , HORVU4Hr1G058450.9 , HORVU4Hr1G058450.4 , HORVU4Hr1G058450.5 , HORVU4Hr1G058450.6 , HORVU4Hr1G058450.7 , HORVU4Hr1G058450.1 , HORVU4Hr1G058450.2 , HORVU4Hr1G058450.3 , HORVU4Hr1G058450.10 , HORVU4Hr1G058450.11
Wheat TraesCS4B02G202300 , TraesCS4A02G102300 , TraesCS4D02G203200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
2 Sobic.003G286100 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
3 Sobic.004G358700 armadillo/beta-catenin repeat family protein, putative, expressed -
4 Sobic.006G102700 expressed protein -
5 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.009G015000 expressed protein -
7 Sobic.004G128000 expressed protein -
8 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
9 Sobic.003G025000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@carnitine racemase like protein, putative, expressed -
10 Sobic.007G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@calvin cycle protein CP12, putative, expressed -
11 Sobic.010G095500 NHL repeat-containing protein, putative, expressed -
12 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.002G253000 no apical meristem protein, putative, expressed -
14 Sobic.010G099400 metalloendoproteinase 1 precursor, putative, expressed -
15 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
16 Sobic.001G062600 aldehyde oxidase, putative, expressed -
17 Sobic.002G311400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
19 Sobic.002G074400 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
20 Sobic.001G388900 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase


Gene co-expression network
sample Sobic001G414400 Sobic001G414400 Sobic001G041000 Sobic001G041000 Sobic001G414400--Sobic001G041000 Sobic003G286100 Sobic003G286100 Sobic001G414400--Sobic003G286100 Sobic004G358700 Sobic004G358700 Sobic001G414400--Sobic004G358700 Sobic006G102700 Sobic006G102700 Sobic001G414400--Sobic006G102700 Sobic002G209300 Sobic002G209300 Sobic001G414400--Sobic002G209300 Sobic009G015000 Sobic009G015000 Sobic001G414400--Sobic009G015000 Sobic004G128000 Sobic004G128000 Sobic001G414400--Sobic004G128000 Sobic010G057100 Sobic010G057100 Sobic001G414400--Sobic010G057100 Sobic003G025000 Sobic003G025000 Sobic001G414400--Sobic003G025000 Sobic001G041000--Sobic009G015000 Sobic002G253000 Sobic002G253000 Sobic001G041000--Sobic002G253000 Sobic001G041000--Sobic004G128000 Sobic001G041000--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic001G041000--Sobic004G099500 Sobic006G244800 Sobic006G244800 Sobic001G041000--Sobic006G244800 Sobic007G168400 Sobic007G168400 Sobic001G041000--Sobic007G168400 Sobic003G187100 Sobic003G187100 Sobic001G041000--Sobic003G187100 Sobic004G259700 Sobic004G259700 Sobic001G041000--Sobic004G259700 Sobic003G286100--Sobic002G209300 Sobic001G158000 Sobic001G158000 Sobic003G286100--Sobic001G158000 Sobic004G265400 Sobic004G265400 Sobic003G286100--Sobic004G265400 Sobic002G403400 Sobic002G403400 Sobic003G286100--Sobic002G403400 Sobic002G059200 Sobic002G059200 Sobic003G286100--Sobic002G059200 Sobic004G013500 Sobic004G013500 Sobic003G286100--Sobic004G013500 Sobic001G193400 Sobic001G193400 Sobic003G286100--Sobic001G193400 Sobic007G221800 Sobic007G221800 Sobic003G286100--Sobic007G221800 Sobic007G149600 Sobic007G149600 Sobic003G286100--Sobic007G149600 Sobic008G178901 Sobic008G178901 Sobic004G358700--Sobic008G178901 Sobic002G005300 Sobic002G005300 Sobic004G358700--Sobic002G005300 Sobic004G358700--Sobic002G209300 Sobic007G052600 Sobic007G052600 Sobic004G358700--Sobic007G052600 Sobic010G241500 Sobic010G241500 Sobic004G358700--Sobic010G241500 Sobic009G206800 Sobic009G206800 Sobic004G358700--Sobic009G206800 Sobic010G155500 Sobic010G155500 Sobic004G358700--Sobic010G155500 Sobic010G099400 Sobic010G099400 Sobic004G358700--Sobic010G099400 Sobic009G123000 Sobic009G123000 Sobic004G358700--Sobic009G123000 Sobic009G244000 Sobic009G244000 Sobic006G102700--Sobic009G244000 Sobic009G116766 Sobic009G116766 Sobic006G102700--Sobic009G116766 Sobic005G231201 Sobic005G231201 Sobic006G102700--Sobic005G231201 Sobic010G045200 Sobic010G045200 Sobic006G102700--Sobic010G045200 Sobic010G120400 Sobic010G120400 Sobic006G102700--Sobic010G120400 Sobic003G292800 Sobic003G292800 Sobic006G102700--Sobic003G292800 Sobic007G224800 Sobic007G224800 Sobic006G102700--Sobic007G224800 Sobic003G201300 Sobic003G201300 Sobic006G102700--Sobic003G201300 Sobic008G127600 Sobic008G127600 Sobic006G102700--Sobic008G127600 Sobic002G209300--Sobic001G158000 Sobic002G209300--Sobic002G403400 Sobic002G209300--Sobic001G193400 Sobic002G209300--Sobic002G059200 Sobic002G209300--Sobic004G265400 Sobic003G350100 Sobic003G350100 Sobic002G209300--Sobic003G350100 Sobic002G209300--Sobic007G221800 Sobic004G230900 Sobic004G230900 Sobic002G209300--Sobic004G230900 Sobic002G209300--Sobic007G149600 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic009G015000--Sobic004G128000 Sobic007G172300 Sobic007G172300 Sobic009G015000--Sobic007G172300 Sobic004G335600 Sobic004G335600 Sobic009G015000--Sobic004G335600 Sobic003G322532 Sobic003G322532 Sobic009G015000--Sobic003G322532 Sobic009G015000--Sobic002G253000 Sobic003G057366 Sobic003G057366 Sobic009G015000--Sobic003G057366 Sobic003G395500 Sobic003G395500 Sobic009G015000--Sobic003G395500 Sobic004G128000--Sobic009G015000 Sobic004G128000--Sobic010G057100 Sobic004G128000--Sobic004G099500 Sobic004G128000--Sobic007G172300 Sobic009G206700 Sobic009G206700 Sobic004G128000--Sobic009G206700 Sobic007G045700 Sobic007G045700 Sobic004G128000--Sobic007G045700 Sobic004G128000--Sobic002G253000 Sobic003G338966 Sobic003G338966 Sobic004G128000--Sobic003G338966 Sobic009G177700 Sobic009G177700 Sobic004G128000--Sobic009G177700 Sobic010G057100--Sobic004G099500 Sobic010G057100--Sobic009G015000 Sobic010G057100--Sobic004G335600 Sobic010G057100--Sobic003G057366 Sobic010G057100--Sobic003G322532 Sobic010G057100--Sobic004G128000 Sobic010G057100--Sobic009G177700 Sobic010G057100--Sobic007G045700 Sobic001G313200 Sobic001G313200 Sobic010G057100--Sobic001G313200 Sobic003G109300 Sobic003G109300 Sobic003G025000--Sobic003G109300 Sobic006G223900 Sobic006G223900 Sobic003G025000--Sobic006G223900 Sobic001G149500 Sobic001G149500 Sobic003G025000--Sobic001G149500 Sobic003G025000--Sobic009G015000 Sobic002G311400 Sobic002G311400 Sobic003G025000--Sobic002G311400 Sobic008G088803 Sobic008G088803 Sobic003G025000--Sobic008G088803 Sobic004G262900 Sobic004G262900 Sobic003G025000--Sobic004G262900 Sobic008G088860 Sobic008G088860 Sobic003G025000--Sobic008G088860 Sobic001G329600 Sobic001G329600 Sobic003G025000--Sobic001G329600
Octagon: transcription factors


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