Gene annotation
Transcriptome id Sobic.001G457200.1
Synonym Sb01g042940
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5WST5
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF370
NCBI CDD KOG0770; Predicted mitochondrial carrier protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74240 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os03g11510.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a001282
Brachypodium KQK22911
Barley HORVU1Hr1G081260.30 , HORVU1Hr1G081260.8 , HORVU1Hr1G081260.9 , HORVU1Hr1G081260.1 , HORVU1Hr1G081260.2 , HORVU1Hr1G081260.3 , HORVU1Hr1G081260.4 , HORVU1Hr1G081260.6 , HORVU1Hr1G081260.7 , HORVU1Hr1G081260.12 , HORVU1Hr1G081260.13 , HORVU1Hr1G081260.10 , HORVU1Hr1G081260.11 , HORVU1Hr1G081260.16 , HORVU1Hr1G081260.17 , HORVU1Hr1G081260.14 , HORVU1Hr1G081260.15 , HORVU1Hr1G081260.18 , HORVU1Hr1G081260.29 , HORVU1Hr1G081260.28 , HORVU1Hr1G081260.22 , HORVU1Hr1G081260.21 , HORVU1Hr1G081260.20 , HORVU1Hr1G081260.27 , HORVU1Hr1G081260.26 , HORVU1Hr1G081260.24 , HORVU1Hr1G081260.5
Wheat TraesCS1D02G353900 , TraesCS1A02G356200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G071700 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
2 Sobic.003G425100 "Protein OSB3, chloroplastic/mitochondrial"(PubMedID : 24906815)@single-stranded DNA-binding protein, putative, expressed -
3 Sobic.006G225400 zinc finger protein, putative, expressed -
4 Sobic.007G092200 aspartate carbamoyltransferase, putative, expressed K00609: pyrB, aspartate carbamoyltransferase catalytic subunit
5 Sobic.009G163600 exosome complex exonuclease, putative, expressed K11600: RRP41, EXOSC4, exosome complex component RRP41
6 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
7 Sobic.006G198600 WD domain, G-beta repeat domain containing protein, expressed K14555: UTP13, U3 small nucleolar RNA-associated protein 13
8 Sobic.002G262100 - K13181: DDX27, ATP-dependent RNA helicase DDX27
9 Sobic.006G251600 exosome complex exonuclease rrp4, putative, expressed K03679: RRP4, exosome complex component RRP4
10 Sobic.004G173100 exosome complex exonuclease, putative, expressed K03678: RRP45, exosome complex component RRP45
11 Sobic.003G436600 expressed protein -
12 Sobic.001G119600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
13 Sobic.001G008500 metallo-beta-lactamase, putative, expressed K14403: CPSF3, cleavage and polyadenylation specificity factor subunit 3
14 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
15 Sobic.001G157300 expressed protein K14793: ribosomal RNA-processing protein 9
16 Sobic.008G163500 WD domain, G-beta repeat domain containing protein, expressed K14552: NAN1, UTP17, NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
17 Sobic.007G137350 - K14549: U3 small nucleolar RNA-associated protein 15
18 Sobic.005G028100 nucleolar complex protein 2, putative, expressed K14833: nucleolar complex protein 2
19 Sobic.007G089800 SET domain containing protein, expressed K19199: protein-histidine N-methyltransferase
20 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A


Gene co-expression network
sample Sobic001G457200 Sobic001G457200 Sobic009G071700 Sobic009G071700 Sobic001G457200--Sobic009G071700 Sobic003G425100 Sobic003G425100 Sobic001G457200--Sobic003G425100 Sobic006G225400 Sobic006G225400 Sobic001G457200--Sobic006G225400 Sobic007G092200 Sobic007G092200 Sobic001G457200--Sobic007G092200 Sobic009G163600 Sobic009G163600 Sobic001G457200--Sobic009G163600 Sobic005G100900 Sobic005G100900 Sobic001G457200--Sobic005G100900 Sobic006G198600 Sobic006G198600 Sobic001G457200--Sobic006G198600 Sobic002G262100 Sobic002G262100 Sobic001G457200--Sobic002G262100 Sobic006G251600 Sobic006G251600 Sobic001G457200--Sobic006G251600 Sobic009G071700--Sobic006G251600 Sobic009G071700--Sobic001G457200 Sobic009G071700--Sobic006G198600 Sobic004G173100 Sobic004G173100 Sobic009G071700--Sobic004G173100 Sobic007G137350 Sobic007G137350 Sobic009G071700--Sobic007G137350 Sobic009G071700--Sobic006G225400 Sobic009G071700--Sobic005G100900 Sobic009G071700--Sobic003G425100 Sobic009G071700--Sobic007G092200 Sobic003G425100--Sobic009G163600 Sobic005G028100 Sobic005G028100 Sobic003G425100--Sobic005G028100 Sobic004G027300 Sobic004G027300 Sobic003G425100--Sobic004G027300 Sobic003G425100--Sobic006G225400 Sobic010G224700 Sobic010G224700 Sobic003G425100--Sobic010G224700 Sobic003G425100--Sobic009G071700 Sobic003G436600 Sobic003G436600 Sobic003G425100--Sobic003G436600 Sobic003G425100--Sobic006G198600 Sobic004G036700 Sobic004G036700 Sobic003G425100--Sobic004G036700 Sobic006G225400--Sobic005G028100 Sobic006G225400--Sobic006G251600 Sobic006G225400--Sobic004G036700 Sobic006G225400--Sobic003G425100 Sobic006G225400--Sobic009G071700 Sobic010G205900 Sobic010G205900 Sobic006G225400--Sobic010G205900 Sobic003G123200 Sobic003G123200 Sobic006G225400--Sobic003G123200 Sobic001G401400 Sobic001G401400 Sobic006G225400--Sobic001G401400 Sobic006G225400--Sobic006G198600 Sobic007G092200--Sobic009G071700 Sobic009G191500 Sobic009G191500 Sobic007G092200--Sobic009G191500 Sobic007G092200--Sobic006G225400 Sobic003G336500 Sobic003G336500 Sobic007G092200--Sobic003G336500 Sobic007G092200--Sobic007G137350 Sobic007G092200--Sobic001G457200 Sobic005G088900 Sobic005G088900 Sobic007G092200--Sobic005G088900 Sobic005G079201 Sobic005G079201 Sobic007G092200--Sobic005G079201 Sobic001G372800 Sobic001G372800 Sobic007G092200--Sobic001G372800 Sobic009G163600--Sobic003G425100 Sobic009G163600--Sobic003G436600 Sobic002G112600 Sobic002G112600 Sobic009G163600--Sobic002G112600 Sobic009G163600--Sobic010G224700 Sobic001G322600 Sobic001G322600 Sobic009G163600--Sobic001G322600 Sobic008G163500 Sobic008G163500 Sobic009G163600--Sobic008G163500 Sobic004G038100 Sobic004G038100 Sobic009G163600--Sobic004G038100 Sobic007G059700 Sobic007G059700 Sobic009G163600--Sobic007G059700 Sobic006G140400 Sobic006G140400 Sobic009G163600--Sobic006G140400 Sobic002G238000 Sobic002G238000 Sobic005G100900--Sobic002G238000 Sobic005G100900--Sobic009G071700 Sobic007G114000 Sobic007G114000 Sobic005G100900--Sobic007G114000 Sobic005G100900--Sobic003G425100 Sobic001G119600 Sobic001G119600 Sobic005G100900--Sobic001G119600 Sobic005G100900--Sobic002G262100 Sobic005G100900--Sobic004G173100 Sobic001G485600 Sobic001G485600 Sobic005G100900--Sobic001G485600 Sobic008G165900 Sobic008G165900 Sobic005G100900--Sobic008G165900 Sobic006G198600--Sobic003G123200 Sobic006G198600--Sobic009G071700 Sobic006G198600--Sobic001G401400 Sobic006G198600--Sobic008G163500 Sobic006G198600--Sobic006G251600 Sobic008G049100 Sobic008G049100 Sobic006G198600--Sobic008G049100 Sobic006G198600--Sobic003G425100 Sobic006G198600--Sobic004G036700 Sobic001G157300 Sobic001G157300 Sobic006G198600--Sobic001G157300 Sobic002G262100--Sobic001G119600 Sobic002G399200 Sobic002G399200 Sobic002G262100--Sobic002G399200 Sobic002G378100 Sobic002G378100 Sobic002G262100--Sobic002G378100 Sobic002G262100--Sobic008G163500 Sobic001G422500 Sobic001G422500 Sobic002G262100--Sobic001G422500 Sobic002G262100--Sobic001G157300 Sobic002G262100--Sobic004G173100 Sobic002G262100--Sobic003G425100 Sobic002G262100--Sobic006G198600 Sobic006G251600--Sobic009G071700 Sobic002G365900 Sobic002G365900 Sobic006G251600--Sobic002G365900 Sobic006G251600--Sobic006G225400 Sobic001G008500 Sobic001G008500 Sobic006G251600--Sobic001G008500 Sobic008G083400 Sobic008G083400 Sobic006G251600--Sobic008G083400 Sobic006G251600--Sobic006G198600 Sobic006G251600--Sobic010G205900 Sobic006G251600--Sobic004G173100 Sobic001G371100 Sobic001G371100 Sobic006G251600--Sobic001G371100
Octagon: transcription factors


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