Gene annotation
Transcriptome id Sobic.001G498066.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBL0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
2 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
3 Sobic.002G031500 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.004G240000 phosphoenolpyruvate carboxylase kinase, putative, expressed -
5 Sobic.008G123300 AAA-type ATPase family protein, putative, expressed -
6 Sobic.003G370300 GPI transamidase subunit PIG-U domain containing protein, expressed K10879: DNA-repair protein XRCC2
7 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
8 Sobic.003G363000 expressed protein -
9 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
11 Sobic.001G537400 MYB family transcription factor, putative, expressed -
12 Sobic.004G222200 - -
13 Sobic.009G020100 hydrolase, NUDIX family, domain containing protein, expressed -
14 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.001G165801 - -
16 Sobic.005G102350 - -
17 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
18 Sobic.001G397800 TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
19 Sobic.007G184100 expressed protein -
20 Sobic.010G025000 meiotic asynaptic mutant 1, putative, expressed -


Gene co-expression network
sample Sobic001G498066 Sobic001G498066 Sobic001G027500 Sobic001G027500 Sobic001G498066--Sobic001G027500 Sobic003G311600 Sobic003G311600 Sobic001G498066--Sobic003G311600 Sobic002G031500 Sobic002G031500 Sobic001G498066--Sobic002G031500 Sobic004G240000 Sobic004G240000 Sobic001G498066--Sobic004G240000 Sobic008G123300 Sobic008G123300 Sobic001G498066--Sobic008G123300 Sobic003G370300 Sobic003G370300 Sobic001G498066--Sobic003G370300 Sobic004G253500 Sobic004G253500 Sobic001G498066--Sobic004G253500 Sobic003G363000 Sobic003G363000 Sobic001G498066--Sobic003G363000 Sobic009G177200 Sobic009G177200 Sobic001G498066--Sobic009G177200 Sobic010G257000 Sobic010G257000 Sobic001G027500--Sobic010G257000 Sobic002G168000 Sobic002G168000 Sobic001G027500--Sobic002G168000 Sobic008G063600 Sobic008G063600 Sobic001G027500--Sobic008G063600 Sobic004G222200 Sobic004G222200 Sobic001G027500--Sobic004G222200 Sobic006G226000 Sobic006G226000 Sobic001G027500--Sobic006G226000 Sobic006G262501 Sobic006G262501 Sobic001G027500--Sobic006G262501 Sobic002G055800 Sobic002G055800 Sobic001G027500--Sobic002G055800 Sobic007G187700 Sobic007G187700 Sobic001G027500--Sobic007G187700 Sobic005G153000 Sobic005G153000 Sobic001G027500--Sobic005G153000 Sobic007G070000 Sobic007G070000 Sobic003G311600--Sobic007G070000 Sobic008G088842 Sobic008G088842 Sobic003G311600--Sobic008G088842 Sobic003G104100 Sobic003G104100 Sobic003G311600--Sobic003G104100 Sobic001G165801 Sobic001G165801 Sobic003G311600--Sobic001G165801 Sobic006G236000 Sobic006G236000 Sobic003G311600--Sobic006G236000 Sobic002G340200 Sobic002G340200 Sobic003G311600--Sobic002G340200 Sobic007G094500 Sobic007G094500 Sobic003G311600--Sobic007G094500 Sobic003G135500 Sobic003G135500 Sobic003G311600--Sobic003G135500 Sobic002G162500 Sobic002G162500 Sobic003G311600--Sobic002G162500 Sobic001G503200 Sobic001G503200 Sobic002G031500--Sobic001G503200 Sobic002G031500--Sobic002G162500 Sobic002G167800 Sobic002G167800 Sobic002G031500--Sobic002G167800 Sobic001G440100 Sobic001G440100 Sobic002G031500--Sobic001G440100 Sobic003G256600 Sobic003G256600 Sobic002G031500--Sobic003G256600 Sobic004G135900 Sobic004G135900 Sobic002G031500--Sobic004G135900 Sobic003G411800 Sobic003G411800 Sobic002G031500--Sobic003G411800 Sobic001G258900 Sobic001G258900 Sobic002G031500--Sobic001G258900 Sobic002G031500--Sobic003G311600 Sobic004G240000--Sobic002G168000 Sobic004G215900 Sobic004G215900 Sobic004G240000--Sobic004G215900 Sobic006G202000 Sobic006G202000 Sobic004G240000--Sobic006G202000 Sobic009G191500 Sobic009G191500 Sobic004G240000--Sobic009G191500 Sobic004G240000--Sobic008G063600 Sobic004G240000--Sobic001G027500 Sobic008G111600 Sobic008G111600 Sobic004G240000--Sobic008G111600 Sobic004G240000--Sobic006G262501 Sobic004G240000--Sobic006G236000 Sobic002G239601 Sobic002G239601 Sobic008G123300--Sobic002G239601 Sobic002G112600 Sobic002G112600 Sobic008G123300--Sobic002G112600 Sobic001G200200 Sobic001G200200 Sobic008G123300--Sobic001G200200 Sobic010G279300 Sobic010G279300 Sobic008G123300--Sobic010G279300 Sobic004G356200 Sobic004G356200 Sobic008G123300--Sobic004G356200 Sobic008G123300--Sobic003G135500 Sobic008G151432 Sobic008G151432 Sobic008G123300--Sobic008G151432 Sobic002G137601 Sobic002G137601 Sobic008G123300--Sobic002G137601 Sobic002G386900 Sobic002G386900 Sobic008G123300--Sobic002G386900 Sobic002G021200 Sobic002G021200 Sobic003G370300--Sobic002G021200 Sobic002G112000 Sobic002G112000 Sobic003G370300--Sobic002G112000 Sobic010G250400 Sobic010G250400 Sobic003G370300--Sobic010G250400 Sobic003G129500 Sobic003G129500 Sobic003G370300--Sobic003G129500 Sobic003G370300--Sobic005G153000 Sobic007G121600 Sobic007G121600 Sobic003G370300--Sobic007G121600 Sobic002G317700 Sobic002G317700 Sobic003G370300--Sobic002G317700 Sobic001G377700 Sobic001G377700 Sobic003G370300--Sobic001G377700 Sobic001G054700 Sobic001G054700 Sobic003G370300--Sobic001G054700 Sobic003G078300 Sobic003G078300 Sobic004G253500--Sobic003G078300 Sobic001G461800 Sobic001G461800 Sobic004G253500--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G253500--Sobic003G250000 Sobic003G259500 Sobic003G259500 Sobic004G253500--Sobic003G259500 Sobic008G059900 Sobic008G059900 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic009G002900 Sobic009G002900 Sobic004G253500--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic004G253500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic004G253500--Sobic003G102700 Sobic003G363000--Sobic009G191500 Sobic003G336500 Sobic003G336500 Sobic003G363000--Sobic003G336500 Sobic008G123200 Sobic008G123200 Sobic003G363000--Sobic008G123200 Sobic010G175000 Sobic010G175000 Sobic003G363000--Sobic010G175000 Sobic008G068100 Sobic008G068100 Sobic003G363000--Sobic008G068100 Sobic002G003300 Sobic002G003300 Sobic003G363000--Sobic002G003300 Sobic005G079201 Sobic005G079201 Sobic003G363000--Sobic005G079201 Sobic007G060600 Sobic007G060600 Sobic003G363000--Sobic007G060600 Sobic009G148200 Sobic009G148200 Sobic003G363000--Sobic009G148200 Sobic001G537400 Sobic001G537400 Sobic009G177200--Sobic001G537400 Sobic009G177200--Sobic009G002900 Sobic009G177200--Sobic001G199500 Sobic001G395200 Sobic001G395200 Sobic009G177200--Sobic001G395200 Sobic008G113300 Sobic008G113300 Sobic009G177200--Sobic008G113300 Sobic008G045000 Sobic008G045000 Sobic009G177200--Sobic008G045000 Sobic003G223000 Sobic003G223000 Sobic009G177200--Sobic003G223000 Sobic006G140400 Sobic006G140400 Sobic009G177200--Sobic006G140400 Sobic001G425700 Sobic001G425700 Sobic009G177200--Sobic001G425700
Octagon: transcription factors


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