Gene annotation
Transcriptome id Sobic.001G523800.3,Sobic.001G523800.1,Sobic.001G523800.2
Synonym pat1, TRP1, Sb01g048790
Functional annotation anthranilate phosphoribosyltransferase, chloroplast precursor, putative, expressed
UniProt A0A1Z5SBN2 , A0A1B6QQU6 , A0A1Z5SBP4
Pfam PF02885 PF00591 PF00591
Panther DB PTHR11922 PTHR11922:SF5
NCBI CDD KOG1438; Anthranilate phosphoribosyltransferase
KEGG Orthology K00766; anthranilate phosphoribosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G17990 : tryptophan biosynthesis 1
RAP-DB (Rice) LOC_Os03g03450.1 : anthranilate phosphoribosyltransferase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a053481
Brachypodium PNT78285
Barley HORVU4Hr1G083210.8 , HORVU4Hr1G083210.9 , HORVU4Hr1G083210.2 , HORVU4Hr1G083210.3 , HORVU4Hr1G083210.1 , HORVU4Hr1G083210.6 , HORVU4Hr1G083210.7 , HORVU4Hr1G083210.4 , HORVU4Hr1G083210.5 , HORVU4Hr1G083210.10 , HORVU4Hr1G083210.11 , HORVU4Hr1G083210.12 , HORVU4Hr1G083210.13
Wheat TraesCS5A02G493300 , TraesCS4D02G315400 , TraesCS4B02G318900 , TraesCS5A02G493300
Populus -


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cDNA sequences
Sobic.001G523800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G130200 expressed protein -
2 Sobic.004G116600 E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed -
3 Sobic.009G059400 expressed protein -
4 Sobic.009G037000 agenet domain containing protein, putative, expressed -
5 Sobic.007G158900 expressed protein -
6 Sobic.008G038400 expressed protein -
7 Sobic.005G049000 transcription elongation factor protein, putative, expressed -
8 Sobic.003G445200 - -
9 Sobic.001G130200 DUF1336 domain containing protein, expressed -
10 Sobic.003G381600 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
11 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
12 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
13 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
14 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
16 Sobic.003G417900 cullin-1, putative, expressed -
17 Sobic.001G424900 - -
18 Sobic.001G192900 DNA excision repair protein ERCC-1, putative, expressed K10849: DNA excision repair protein ERCC-1
19 Sobic.001G202266 - -
20 Sobic.006G100000 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic001G523800 Sobic001G523800 Sobic006G130200 Sobic006G130200 Sobic001G523800--Sobic006G130200 Sobic004G116600 Sobic004G116600 Sobic001G523800--Sobic004G116600 Sobic009G059400 Sobic009G059400 Sobic001G523800--Sobic009G059400 Sobic009G037000 Sobic009G037000 Sobic001G523800--Sobic009G037000 Sobic007G158900 Sobic007G158900 Sobic001G523800--Sobic007G158900 Sobic008G038400 Sobic008G038400 Sobic001G523800--Sobic008G038400 Sobic005G049000 Sobic005G049000 Sobic001G523800--Sobic005G049000 Sobic003G445200 Sobic003G445200 Sobic001G523800--Sobic003G445200 Sobic001G130200 Sobic001G130200 Sobic001G523800--Sobic001G130200 Sobic006G128800 Sobic006G128800 Sobic006G130200--Sobic006G128800 Sobic004G218300 Sobic004G218300 Sobic006G130200--Sobic004G218300 Sobic010G174800 Sobic010G174800 Sobic006G130200--Sobic010G174800 Sobic009G032300 Sobic009G032300 Sobic006G130200--Sobic009G032300 Sobic003G398400 Sobic003G398400 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic006G130200--Sobic006G092800 Sobic003G336800 Sobic003G336800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000 Sobic001G202266 Sobic001G202266 Sobic004G116600--Sobic001G202266 Sobic001G287800 Sobic001G287800 Sobic004G116600--Sobic001G287800 Sobic004G180900 Sobic004G180900 Sobic004G116600--Sobic004G180900 Sobic004G116600--Sobic006G130200 Sobic004G116600--Sobic005G049000 Sobic006G144000 Sobic006G144000 Sobic004G116600--Sobic006G144000 Sobic004G116600--Sobic004G218300 Sobic001G017200 Sobic001G017200 Sobic004G116600--Sobic001G017200 Sobic007G192400 Sobic007G192400 Sobic004G116600--Sobic007G192400 Sobic009G017200 Sobic009G017200 Sobic009G059400--Sobic009G017200 Sobic005G198200 Sobic005G198200 Sobic009G059400--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic009G059400--Sobic007G218600 Sobic009G059400--Sobic006G144000 Sobic003G393200 Sobic003G393200 Sobic009G059400--Sobic003G393200 Sobic009G125000 Sobic009G125000 Sobic009G059400--Sobic009G125000 Sobic004G345400 Sobic004G345400 Sobic009G059400--Sobic004G345400 Sobic007G148400 Sobic007G148400 Sobic009G059400--Sobic007G148400 Sobic006G224300 Sobic006G224300 Sobic009G059400--Sobic006G224300 Sobic009G037000--Sobic008G038400 Sobic004G024700 Sobic004G024700 Sobic009G037000--Sobic004G024700 Sobic006G223200 Sobic006G223200 Sobic009G037000--Sobic006G223200 Sobic007G029600 Sobic007G029600 Sobic009G037000--Sobic007G029600 Sobic006G186400 Sobic006G186400 Sobic009G037000--Sobic006G186400 Sobic010G063300 Sobic010G063300 Sobic009G037000--Sobic010G063300 Sobic003G001400 Sobic003G001400 Sobic009G037000--Sobic003G001400 Sobic007G147400 Sobic007G147400 Sobic009G037000--Sobic007G147400 Sobic003G365700 Sobic003G365700 Sobic009G037000--Sobic003G365700 Sobic009G199500 Sobic009G199500 Sobic007G158900--Sobic009G199500 Sobic010G181600 Sobic010G181600 Sobic007G158900--Sobic010G181600 Sobic007G158900--Sobic007G192400 Sobic007G158900--Sobic009G059400 Sobic002G023100 Sobic002G023100 Sobic007G158900--Sobic002G023100 Sobic007G158900--Sobic001G017200 Sobic007G158900--Sobic007G218600 Sobic007G158900--Sobic004G218300 Sobic008G006000 Sobic008G006000 Sobic007G158900--Sobic008G006000 Sobic008G038400--Sobic009G037000 Sobic010G051200 Sobic010G051200 Sobic008G038400--Sobic010G051200 Sobic008G038400--Sobic004G024700 Sobic002G165800 Sobic002G165800 Sobic008G038400--Sobic002G165800 Sobic007G103600 Sobic007G103600 Sobic008G038400--Sobic007G103600 Sobic008G038400--Sobic007G147400 Sobic003G444800 Sobic003G444800 Sobic008G038400--Sobic003G444800 Sobic003G039900 Sobic003G039900 Sobic008G038400--Sobic003G039900 Sobic008G038400--Sobic006G186400 Sobic005G049000--Sobic004G116600 Sobic005G049000--Sobic007G192400 Sobic008G108500 Sobic008G108500 Sobic005G049000--Sobic008G108500 Sobic010G069500 Sobic010G069500 Sobic005G049000--Sobic010G069500 Sobic005G049000--Sobic008G006000 Sobic007G177500 Sobic007G177500 Sobic005G049000--Sobic007G177500 Sobic005G170000 Sobic005G170000 Sobic005G049000--Sobic005G170000 Sobic006G203600 Sobic006G203600 Sobic005G049000--Sobic006G203600 Sobic005G049000--Sobic006G144000 Sobic003G445200--Sobic009G199500 Sobic009G227100 Sobic009G227100 Sobic003G445200--Sobic009G227100 Sobic002G398500 Sobic002G398500 Sobic003G445200--Sobic002G398500 Sobic006G103700 Sobic006G103700 Sobic003G445200--Sobic006G103700 Sobic006G220400 Sobic006G220400 Sobic003G445200--Sobic006G220400 Sobic001G043200 Sobic001G043200 Sobic003G445200--Sobic001G043200 Sobic005G123400 Sobic005G123400 Sobic003G445200--Sobic005G123400 Sobic003G445200--Sobic007G158900 Sobic003G113400 Sobic003G113400 Sobic003G445200--Sobic003G113400 Sobic009G166600 Sobic009G166600 Sobic001G130200--Sobic009G166600 Sobic003G381600 Sobic003G381600 Sobic001G130200--Sobic003G381600 Sobic001G130200--Sobic006G224300 Sobic001G130200--Sobic003G398400 Sobic001G424900 Sobic001G424900 Sobic001G130200--Sobic001G424900 Sobic008G173400 Sobic008G173400 Sobic001G130200--Sobic008G173400 Sobic010G243400 Sobic010G243400 Sobic001G130200--Sobic010G243400 Sobic001G130200--Sobic007G158900 Sobic003G394200 Sobic003G394200 Sobic001G130200--Sobic003G394200
Octagon: transcription factors


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