Gene annotation
Transcriptome id Sobic.002G076800.2,Sobic.002G076800.1
Synonym Sb02g006410
Functional annotation expressed protein
UniProt A0A1B6Q9S3 , A0A1B6Q9U3
Pfam PF08538
Panther DB PTHR31591 PTHR31591:SF1
NCBI CDD KOG4840; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19050 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os07g11060.1 : expressed protein
MaizeGDB (Corn) Zm00025a045399
Brachypodium KQK20361
Barley HORVU2Hr1G052170.3 , HORVU2Hr1G052170.2 , HORVU2Hr1G052170.1 , HORVU2Hr1G052170.7 , HORVU2Hr1G052170.6 , HORVU2Hr1G052170.5 , HORVU2Hr1G052170.4 , HORVU2Hr1G052170.9 , HORVU2Hr1G052170.8 , HORVU2Hr1G052170.13 , HORVU2Hr1G052170.12 , HORVU2Hr1G052170.10 , HORVU2Hr1G052170.17 , HORVU2Hr1G052170.16 , HORVU2Hr1G052170.15 , HORVU2Hr1G052170.14
Wheat TraesCS2B02G253300 , TraesCS2D02G236400 , TraesCS2A02G234800
Populus -


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cDNA sequences
Sobic.002G076800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein
2 Sobic.001G542700 expressed protein -
3 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
4 Sobic.003G243700 vacuolar protein-sorting-associated protein 25, putative, expressed K12189: VPS25, ESCRT-II complex subunit VPS25
5 Sobic.007G213000 beta 1,2-xylosyltransferase, putative, expressed K03714: glycoprotein 2-beta-D-xylosyltransferase
6 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
7 Sobic.001G426600 SH3 domain containing protein, expressed -
8 Sobic.009G229600 tRNA-binding arm, putative, expressed -
9 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
10 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
11 Sobic.004G093500 ribosomal protein S7, putative, expressed K13173: arginine and glutamate-rich protein 1
12 Sobic.008G042600 N-acetylglucosaminyltransferase I, putative, expressed K00726: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
13 Sobic.003G153700 expressed protein -
14 Sobic.003G366500 transport protein particle component, Bet3, domain containing protein, expressed -
15 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
16 Sobic.007G112200 ENT domain containing protein, expressed -
17 Sobic.002G069900 OsFBX230 - F-box domain containing protein, expressed -
18 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
19 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
20 Sobic.004G088501 - K17302: COPB2, coatomer subunit beta'


Gene co-expression network
sample Sobic002G076800 Sobic002G076800 Sobic001G515100 Sobic001G515100 Sobic002G076800--Sobic001G515100 Sobic001G542700 Sobic001G542700 Sobic002G076800--Sobic001G542700 Sobic009G049400 Sobic009G049400 Sobic002G076800--Sobic009G049400 Sobic003G243700 Sobic003G243700 Sobic002G076800--Sobic003G243700 Sobic007G213000 Sobic007G213000 Sobic002G076800--Sobic007G213000 Sobic006G245400 Sobic006G245400 Sobic002G076800--Sobic006G245400 Sobic001G426600 Sobic001G426600 Sobic002G076800--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic002G076800--Sobic009G229600 Sobic007G061700 Sobic007G061700 Sobic002G076800--Sobic007G061700 Sobic003G401100 Sobic003G401100 Sobic001G515100--Sobic003G401100 Sobic006G077200 Sobic006G077200 Sobic001G515100--Sobic006G077200 Sobic003G184699 Sobic003G184699 Sobic001G515100--Sobic003G184699 Sobic001G143500 Sobic001G143500 Sobic001G515100--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic001G515100--Sobic007G027700 Sobic007G075900 Sobic007G075900 Sobic001G515100--Sobic007G075900 Sobic002G370900 Sobic002G370900 Sobic001G515100--Sobic002G370900 Sobic005G216300 Sobic005G216300 Sobic001G515100--Sobic005G216300 Sobic001G176200 Sobic001G176200 Sobic001G515100--Sobic001G176200 Sobic004G009600 Sobic004G009600 Sobic001G542700--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic001G542700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic001G542700--Sobic001G241200 Sobic002G299700 Sobic002G299700 Sobic001G542700--Sobic002G299700 Sobic007G117400 Sobic007G117400 Sobic001G542700--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic001G542700--Sobic003G293200 Sobic009G040600 Sobic009G040600 Sobic001G542700--Sobic009G040600 Sobic001G542700--Sobic007G061700 Sobic010G209400 Sobic010G209400 Sobic001G542700--Sobic010G209400 Sobic001G369000 Sobic001G369000 Sobic009G049400--Sobic001G369000 Sobic009G049400--Sobic009G229600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic001G335900 Sobic001G335900 Sobic009G049400--Sobic001G335900 Sobic006G163800 Sobic006G163800 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic004G039600 Sobic004G039600 Sobic009G049400--Sobic004G039600 Sobic003G240700 Sobic003G240700 Sobic009G049400--Sobic003G240700 Sobic010G243400 Sobic010G243400 Sobic003G243700--Sobic010G243400 Sobic001G114000 Sobic001G114000 Sobic003G243700--Sobic001G114000 Sobic003G173600 Sobic003G173600 Sobic003G243700--Sobic003G173600 Sobic002G262900 Sobic002G262900 Sobic003G243700--Sobic002G262900 Sobic003G270600 Sobic003G270600 Sobic003G243700--Sobic003G270600 Sobic007G218000 Sobic007G218000 Sobic003G243700--Sobic007G218000 Sobic009G124700 Sobic009G124700 Sobic003G243700--Sobic009G124700 Sobic007G132100 Sobic007G132100 Sobic003G243700--Sobic007G132100 Sobic004G178200 Sobic004G178200 Sobic003G243700--Sobic004G178200 Sobic001G127000 Sobic001G127000 Sobic007G213000--Sobic001G127000 Sobic007G213000--Sobic002G370900 Sobic003G427600 Sobic003G427600 Sobic007G213000--Sobic003G427600 Sobic003G036500 Sobic003G036500 Sobic007G213000--Sobic003G036500 Sobic007G213000--Sobic003G270600 Sobic009G122500 Sobic009G122500 Sobic007G213000--Sobic009G122500 Sobic007G213000--Sobic009G229600 Sobic007G213000--Sobic004G178200 Sobic003G392550 Sobic003G392550 Sobic007G213000--Sobic003G392550 Sobic002G340100 Sobic002G340100 Sobic006G245400--Sobic002G340100 Sobic007G172400 Sobic007G172400 Sobic006G245400--Sobic007G172400 Sobic004G052900 Sobic004G052900 Sobic006G245400--Sobic004G052900 Sobic004G113400 Sobic004G113400 Sobic006G245400--Sobic004G113400 Sobic006G245400--Sobic001G114000 Sobic006G237400 Sobic006G237400 Sobic006G245400--Sobic006G237400 Sobic007G217000 Sobic007G217000 Sobic006G245400--Sobic007G217000 Sobic001G065000 Sobic001G065000 Sobic006G245400--Sobic001G065000 Sobic001G474600 Sobic001G474600 Sobic006G245400--Sobic001G474600 Sobic001G534800 Sobic001G534800 Sobic001G426600--Sobic001G534800 Sobic001G170100 Sobic001G170100 Sobic001G426600--Sobic001G170100 Sobic001G426600--Sobic009G049400 Sobic001G426600--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic001G426600--Sobic010G275500 Sobic001G287500 Sobic001G287500 Sobic001G426600--Sobic001G287500 Sobic007G019300 Sobic007G019300 Sobic001G426600--Sobic007G019300 Sobic001G426600--Sobic004G039600 Sobic004G051200 Sobic004G051200 Sobic001G426600--Sobic004G051200 Sobic009G229600--Sobic009G049400 Sobic009G229600--Sobic001G369000 Sobic009G229600--Sobic001G335900 Sobic009G229600--Sobic003G427600 Sobic009G229600--Sobic003G270600 Sobic006G202200 Sobic006G202200 Sobic009G229600--Sobic006G202200 Sobic001G518400 Sobic001G518400 Sobic009G229600--Sobic001G518400 Sobic009G229600--Sobic004G039600 Sobic007G120500 Sobic007G120500 Sobic009G229600--Sobic007G120500 Sobic008G149800 Sobic008G149800 Sobic007G061700--Sobic008G149800 Sobic002G158700 Sobic002G158700 Sobic007G061700--Sobic002G158700 Sobic004G246100 Sobic004G246100 Sobic007G061700--Sobic004G246100 Sobic003G401000 Sobic003G401000 Sobic007G061700--Sobic003G401000 Sobic006G046700 Sobic006G046700 Sobic007G061700--Sobic006G046700 Sobic007G061700--Sobic001G542700 Sobic008G153000 Sobic008G153000 Sobic007G061700--Sobic008G153000 Sobic001G544200 Sobic001G544200 Sobic007G061700--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic007G061700--Sobic004G031700
Octagon: transcription factors


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