Gene annotation
Transcriptome id Sobic.004G093500.2
Synonym Sb04g007690
Functional annotation ribosomal protein S7, putative, expressed
UniProt A0A1Z5RMN8
Pfam PF15346
Panther DB PTHR31711 PTHR31711:SF2
NCBI CDD -
KEGG Orthology K13173; arginine and glutamate-rich protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13340 : -
RAP-DB (Rice) LOC_Os10g15390.1 : ribosomal protein S7, putative, expressed
MaizeGDB (Corn) Zm00025a020189
Brachypodium KQJ96432 , PNT67236
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G075800 expressed protein -
2 Sobic.002G076800 expressed protein -
3 Sobic.002G127100 RNA-binding protein Luc7-like, putative, expressed -
4 Sobic.003G038500 SSRP1-like FACT complex subunit, putative, expressed K09272: structure-specific recognition protein 1
5 Sobic.001G260400 transcription initiation factor, putative, expressed K03136: TFIIE1, GTF2E1, TFA1, transcription initiation factor TFIIE subunit alpha
6 Sobic.001G465300 splicing factor, putative, expressed -
7 Sobic.007G004000 YL1 nuclear protein C-terminal domain containing protein, expressed K11664: VPS72, TCFL1, vacuolar protein sorting-associated protein 72
8 Sobic.001G542300 expressed protein -
9 Sobic.003G153700 expressed protein -
10 Sobic.001G217600 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed K17805: PAM16, mitochondrial import inner membrane translocase subunit TIM16
11 Sobic.008G011000 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
12 Sobic.003G366500 transport protein particle component, Bet3, domain containing protein, expressed -
13 Sobic.004G257400 WD-40 repeat family protein, putative, expressed -
14 Sobic.003G297900 heat- and acid-stable phosphoprotein, putative, expressed -
15 Sobic.006G251900 - -
16 Sobic.003G278300 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
17 Sobic.005G025700 RNA recognition motif containing protein, putative, expressed K13093: HIV Tat-specific factor 1
18 Sobic.003G199001 - -
19 Sobic.008G015500 RNA recognition motif containing protein, putative, expressed K13093: HIV Tat-specific factor 1
20 Sobic.004G151700 cyclin-L1-1, putative, expressed -


Gene co-expression network
sample Sobic004G093500 Sobic004G093500 Sobic003G075800 Sobic003G075800 Sobic004G093500--Sobic003G075800 Sobic002G076800 Sobic002G076800 Sobic004G093500--Sobic002G076800 Sobic002G127100 Sobic002G127100 Sobic004G093500--Sobic002G127100 Sobic003G038500 Sobic003G038500 Sobic004G093500--Sobic003G038500 Sobic001G260400 Sobic001G260400 Sobic004G093500--Sobic001G260400 Sobic001G465300 Sobic001G465300 Sobic004G093500--Sobic001G465300 Sobic007G004000 Sobic007G004000 Sobic004G093500--Sobic007G004000 Sobic001G542300 Sobic001G542300 Sobic004G093500--Sobic001G542300 Sobic003G153700 Sobic003G153700 Sobic004G093500--Sobic003G153700 Sobic003G075800--Sobic004G093500 Sobic002G399200 Sobic002G399200 Sobic003G075800--Sobic002G399200 Sobic001G507900 Sobic001G507900 Sobic003G075800--Sobic001G507900 Sobic009G235200 Sobic009G235200 Sobic003G075800--Sobic009G235200 Sobic002G428100 Sobic002G428100 Sobic003G075800--Sobic002G428100 Sobic010G141500 Sobic010G141500 Sobic003G075800--Sobic010G141500 Sobic009G040500 Sobic009G040500 Sobic003G075800--Sobic009G040500 Sobic001G261585 Sobic001G261585 Sobic003G075800--Sobic001G261585 Sobic007G126500 Sobic007G126500 Sobic003G075800--Sobic007G126500 Sobic001G515100 Sobic001G515100 Sobic002G076800--Sobic001G515100 Sobic001G542700 Sobic001G542700 Sobic002G076800--Sobic001G542700 Sobic009G049400 Sobic009G049400 Sobic002G076800--Sobic009G049400 Sobic003G243700 Sobic003G243700 Sobic002G076800--Sobic003G243700 Sobic007G213000 Sobic007G213000 Sobic002G076800--Sobic007G213000 Sobic006G245400 Sobic006G245400 Sobic002G076800--Sobic006G245400 Sobic001G426600 Sobic001G426600 Sobic002G076800--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic002G076800--Sobic009G229600 Sobic007G061700 Sobic007G061700 Sobic002G076800--Sobic007G061700 Sobic001G347300 Sobic001G347300 Sobic002G127100--Sobic001G347300 Sobic006G251900 Sobic006G251900 Sobic002G127100--Sobic006G251900 Sobic007G126600 Sobic007G126600 Sobic002G127100--Sobic007G126600 Sobic003G108700 Sobic003G108700 Sobic002G127100--Sobic003G108700 Sobic008G113100 Sobic008G113100 Sobic002G127100--Sobic008G113100 Sobic007G146900 Sobic007G146900 Sobic002G127100--Sobic007G146900 Sobic004G257400 Sobic004G257400 Sobic002G127100--Sobic004G257400 Sobic005G021500 Sobic005G021500 Sobic002G127100--Sobic005G021500 Sobic001G088100 Sobic001G088100 Sobic002G127100--Sobic001G088100 Sobic010G209400 Sobic010G209400 Sobic003G038500--Sobic010G209400 Sobic003G038500--Sobic007G126600 Sobic003G422300 Sobic003G422300 Sobic003G038500--Sobic003G422300 Sobic003G038500--Sobic004G257400 Sobic007G026300 Sobic007G026300 Sobic003G038500--Sobic007G026300 Sobic001G090400 Sobic001G090400 Sobic003G038500--Sobic001G090400 Sobic003G119000 Sobic003G119000 Sobic003G038500--Sobic003G119000 Sobic002G248400 Sobic002G248400 Sobic003G038500--Sobic002G248400 Sobic001G511500 Sobic001G511500 Sobic003G038500--Sobic001G511500 Sobic005G027400 Sobic005G027400 Sobic001G260400--Sobic005G027400 Sobic003G139900 Sobic003G139900 Sobic001G260400--Sobic003G139900 Sobic010G079900 Sobic010G079900 Sobic001G260400--Sobic010G079900 Sobic001G441400 Sobic001G441400 Sobic001G260400--Sobic001G441400 Sobic004G065100 Sobic004G065100 Sobic001G260400--Sobic004G065100 Sobic004G274200 Sobic004G274200 Sobic001G260400--Sobic004G274200 Sobic001G220300 Sobic001G220300 Sobic001G260400--Sobic001G220300 Sobic008G047800 Sobic008G047800 Sobic001G260400--Sobic008G047800 Sobic002G134200 Sobic002G134200 Sobic001G260400--Sobic002G134200 Sobic001G465300--Sobic003G153700 Sobic002G083800 Sobic002G083800 Sobic001G465300--Sobic002G083800 Sobic010G209000 Sobic010G209000 Sobic001G465300--Sobic010G209000 Sobic001G465300--Sobic004G093500 Sobic003G275600 Sobic003G275600 Sobic001G465300--Sobic003G275600 Sobic001G465300--Sobic007G004000 Sobic002G383300 Sobic002G383300 Sobic001G465300--Sobic002G383300 Sobic006G179800 Sobic006G179800 Sobic001G465300--Sobic006G179800 Sobic001G029400 Sobic001G029400 Sobic001G465300--Sobic001G029400 Sobic004G049700 Sobic004G049700 Sobic007G004000--Sobic004G049700 Sobic007G004000--Sobic002G127100 Sobic006G161000 Sobic006G161000 Sobic007G004000--Sobic006G161000 Sobic002G388500 Sobic002G388500 Sobic007G004000--Sobic002G388500 Sobic007G009700 Sobic007G009700 Sobic007G004000--Sobic007G009700 Sobic007G168300 Sobic007G168300 Sobic007G004000--Sobic007G168300 Sobic007G004000--Sobic006G251900 Sobic010G130100 Sobic010G130100 Sobic007G004000--Sobic010G130100 Sobic003G114500 Sobic003G114500 Sobic007G004000--Sobic003G114500 Sobic002G126300 Sobic002G126300 Sobic001G542300--Sobic002G126300 Sobic004G279500 Sobic004G279500 Sobic001G542300--Sobic004G279500 Sobic002G164300 Sobic002G164300 Sobic001G542300--Sobic002G164300 Sobic002G357700 Sobic002G357700 Sobic001G542300--Sobic002G357700 Sobic009G088000 Sobic009G088000 Sobic001G542300--Sobic009G088000 Sobic010G204400 Sobic010G204400 Sobic001G542300--Sobic010G204400 Sobic001G542300--Sobic010G209400 Sobic001G542300--Sobic007G061700 Sobic002G299100 Sobic002G299100 Sobic001G542300--Sobic002G299100 Sobic003G015900 Sobic003G015900 Sobic003G153700--Sobic003G015900 Sobic003G366500 Sobic003G366500 Sobic003G153700--Sobic003G366500 Sobic003G312200 Sobic003G312200 Sobic003G153700--Sobic003G312200 Sobic001G051200 Sobic001G051200 Sobic003G153700--Sobic001G051200 Sobic004G059000 Sobic004G059000 Sobic003G153700--Sobic004G059000 Sobic002G352600 Sobic002G352600 Sobic003G153700--Sobic002G352600 Sobic009G228700 Sobic009G228700 Sobic003G153700--Sobic009G228700 Sobic001G376800 Sobic001G376800 Sobic003G153700--Sobic001G376800 Sobic002G418700 Sobic002G418700 Sobic003G153700--Sobic002G418700
Octagon: transcription factors


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