Gene annotation
Transcriptome id Sobic.007G112200.1
Synonym Sb07g016770
Functional annotation ENT domain containing protein, expressed
UniProt C5YKE6
Pfam PF09465 PF03735
Panther DB PTHR33432 PTHR33432:SF6
NCBI CDD KOG4675; Uncharacterized conserved protein, contains ENT domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13020 : Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
RAP-DB (Rice) LOC_Os08g23930.2 : ENT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047458 , Zm00025a030763
Brachypodium KQJ96333 , KQJ96331 , KQJ96330 , KQJ96332
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G379200 wound-responsive family protein, putative, expressed -
2 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
3 Sobic.004G088501 - K17302: COPB2, coatomer subunit beta'
4 Sobic.004G223300 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
5 Sobic.006G200700 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
6 Sobic.001G382600 expressed protein -
7 Sobic.001G090100 SRPK4, putative, expressed K08832: SRPK3, serine/threonine-protein kinase SRPK3
8 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
9 Sobic.003G163200 expressed protein K11654: SMARCA5, SNF2H, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
10 Sobic.007G051700 lissencephaly type-1-like homology motif, putative, expressed -
11 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
12 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
13 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
14 Sobic.006G131000 expressed protein K11968: ariadne-1
15 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor
16 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
17 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
18 Sobic.002G179400 DNA binding protein, putative, expressed -
19 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
20 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7


Gene co-expression network
sample Sobic007G112200 Sobic007G112200 Sobic003G379200 Sobic003G379200 Sobic007G112200--Sobic003G379200 Sobic007G177300 Sobic007G177300 Sobic007G112200--Sobic007G177300 Sobic004G088501 Sobic004G088501 Sobic007G112200--Sobic004G088501 Sobic004G223300 Sobic004G223300 Sobic007G112200--Sobic004G223300 Sobic006G200700 Sobic006G200700 Sobic007G112200--Sobic006G200700 Sobic001G382600 Sobic001G382600 Sobic007G112200--Sobic001G382600 Sobic001G090100 Sobic001G090100 Sobic007G112200--Sobic001G090100 Sobic003G337300 Sobic003G337300 Sobic007G112200--Sobic003G337300 Sobic003G163200 Sobic003G163200 Sobic007G112200--Sobic003G163200 Sobic006G261400 Sobic006G261400 Sobic003G379200--Sobic006G261400 Sobic009G044800 Sobic009G044800 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic010G000800 Sobic010G000800 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G363700 Sobic003G363700 Sobic003G379200--Sobic003G363700 Sobic006G174850 Sobic006G174850 Sobic003G379200--Sobic006G174850 Sobic008G129600 Sobic008G129600 Sobic007G177300--Sobic008G129600 Sobic001G467100 Sobic001G467100 Sobic007G177300--Sobic001G467100 Sobic009G231700 Sobic009G231700 Sobic007G177300--Sobic009G231700 Sobic007G177300--Sobic001G382600 Sobic010G020400 Sobic010G020400 Sobic007G177300--Sobic010G020400 Sobic002G394600 Sobic002G394600 Sobic007G177300--Sobic002G394600 Sobic009G077600 Sobic009G077600 Sobic007G177300--Sobic009G077600 Sobic002G014400 Sobic002G014400 Sobic007G177300--Sobic002G014400 Sobic008G103300 Sobic008G103300 Sobic007G177300--Sobic008G103300 Sobic004G088450 Sobic004G088450 Sobic004G088501--Sobic004G088450 Sobic009G126300 Sobic009G126300 Sobic004G088501--Sobic009G126300 Sobic004G088501--Sobic003G337300 Sobic004G178300 Sobic004G178300 Sobic004G088501--Sobic004G178300 Sobic006G034500 Sobic006G034500 Sobic004G088501--Sobic006G034500 Sobic001G493700 Sobic001G493700 Sobic004G088501--Sobic001G493700 Sobic006G131000 Sobic006G131000 Sobic004G088501--Sobic006G131000 Sobic001G281100 Sobic001G281100 Sobic004G088501--Sobic001G281100 Sobic004G322400 Sobic004G322400 Sobic004G088501--Sobic004G322400 Sobic004G147500 Sobic004G147500 Sobic004G223300--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic004G223300--Sobic002G340900 Sobic001G065100 Sobic001G065100 Sobic004G223300--Sobic001G065100 Sobic002G042600 Sobic002G042600 Sobic004G223300--Sobic002G042600 Sobic008G124800 Sobic008G124800 Sobic004G223300--Sobic008G124800 Sobic005G062200 Sobic005G062200 Sobic004G223300--Sobic005G062200 Sobic003G039000 Sobic003G039000 Sobic004G223300--Sobic003G039000 Sobic004G223300--Sobic001G382600 Sobic002G401500 Sobic002G401500 Sobic004G223300--Sobic002G401500 Sobic004G353000 Sobic004G353000 Sobic006G200700--Sobic004G353000 Sobic006G208500 Sobic006G208500 Sobic006G200700--Sobic006G208500 Sobic008G014500 Sobic008G014500 Sobic006G200700--Sobic008G014500 Sobic010G116600 Sobic010G116600 Sobic006G200700--Sobic010G116600 Sobic006G204800 Sobic006G204800 Sobic006G200700--Sobic006G204800 Sobic001G522600 Sobic001G522600 Sobic006G200700--Sobic001G522600 Sobic003G006400 Sobic003G006400 Sobic006G200700--Sobic003G006400 Sobic004G277200 Sobic004G277200 Sobic006G200700--Sobic004G277200 Sobic006G200700--Sobic009G044800 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic002G008800 Sobic002G008800 Sobic001G382600--Sobic002G008800 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic001G382600--Sobic003G337300 Sobic002G020700 Sobic002G020700 Sobic001G382600--Sobic002G020700 Sobic008G055900 Sobic008G055900 Sobic001G382600--Sobic008G055900 Sobic001G382600--Sobic006G131000 Sobic001G090100--Sobic010G000800 Sobic006G077200 Sobic006G077200 Sobic001G090100--Sobic006G077200 Sobic003G314700 Sobic003G314700 Sobic001G090100--Sobic003G314700 Sobic005G115500 Sobic005G115500 Sobic001G090100--Sobic005G115500 Sobic003G405500 Sobic003G405500 Sobic001G090100--Sobic003G405500 Sobic001G248100 Sobic001G248100 Sobic001G090100--Sobic001G248100 Sobic001G090100--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic001G090100--Sobic003G189600 Sobic009G182600 Sobic009G182600 Sobic001G090100--Sobic009G182600 Sobic003G104000 Sobic003G104000 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic003G337300--Sobic002G137400 Sobic004G039600 Sobic004G039600 Sobic003G337300--Sobic004G039600 Sobic003G337300--Sobic006G131000 Sobic004G344901 Sobic004G344901 Sobic003G337300--Sobic004G344901 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic001G415300 Sobic001G415300 Sobic003G337300--Sobic001G415300 Sobic004G265500 Sobic004G265500 Sobic003G163200--Sobic004G265500 Sobic003G163200--Sobic002G042600 Sobic003G163200--Sobic010G000800 Sobic003G043000 Sobic003G043000 Sobic003G163200--Sobic003G043000 Sobic002G179400 Sobic002G179400 Sobic003G163200--Sobic002G179400 Sobic010G223100 Sobic010G223100 Sobic003G163200--Sobic010G223100 Sobic002G429300 Sobic002G429300 Sobic003G163200--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic003G163200--Sobic006G184900 Sobic004G204100 Sobic004G204100 Sobic003G163200--Sobic004G204100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.