Gene annotation
Transcriptome id Sobic.002G111800.1
Synonym AK, AK-LYS1, Sb02g009570, AK1
Functional annotation aspartokinase, chloroplast precursor, putative, expressed
UniProt A0A1B6QAJ5
Pfam PF00696
Panther DB PTHR21499 PTHR21499:SF32
NCBI CDD -
KEGG Orthology K00928; aspartate kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13280 : aspartate kinase 1
RAP-DB (Rice) LOC_Os07g20544.1 : aspartokinase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013305 , Zm00025a009032
Brachypodium KQK12132
Barley HORVU5Hr1G121250.14 , HORVU5Hr1G121250.15 , HORVU5Hr1G121250.12 , HORVU5Hr1G121250.13 , HORVU5Hr1G121250.10 , HORVU5Hr1G121250.11 , HORVU3Hr1G096500.20 , HORVU5Hr1G121250.8 , HORVU5Hr1G121250.9 , HORVU5Hr1G121250.4 , HORVU5Hr1G121250.5 , HORVU5Hr1G121250.6 , HORVU5Hr1G121250.7 , HORVU5Hr1G121250.1 , HORVU5Hr1G121250.2 , HORVU5Hr1G121250.3 , HORVU3Hr1G096500.9 , HORVU3Hr1G096500.8 , HORVU3Hr1G096500.7 , HORVU3Hr1G096500.6 , HORVU3Hr1G096500.5 , HORVU3Hr1G096500.4 , HORVU3Hr1G096500.3 , HORVU3Hr1G096500.2 , HORVU3Hr1G096500.1 , HORVU3Hr1G096500.13 , HORVU3Hr1G096500.17 , HORVU3Hr1G096500.16 , HORVU3Hr1G096500.15 , HORVU3Hr1G096500.14 , HORVU3Hr1G096500.12 , HORVU3Hr1G096500.11 , HORVU3Hr1G096500.10 , HORVU3Hr1G096500.19 , HORVU3Hr1G096500.18
Wheat TraesCS5D02G487000 , TraesCS5D02G487000 , TraesCS3D02G434800 , TraesCS4A02G337800 , TraesCS5B02G547400 , TraesCS5D02G534600 , TraesCS5D02G534600 , TraesCS5D02G534600 , TraesCS3A02G442100 , TraesCS3A02G442100 , TraesCS3A02G442100 , TraesCS3B02G475900 , TraesCS3B02G475900
Populus PNT51314 , PNT51315 , PNT04886 , PNT04887 , PNT04884 , PNT04885 , PNT04888


JBrowse

Open New Page


cDNA sequences
Sobic.002G111800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G399100 pentatricopeptide, putative, expressed -
3 Sobic.001G027100 FEN1A - Putative flap endonuclease protein, expressed K04799: FEN1, flap endonuclease-1
4 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -
5 Sobic.008G038600 pyridoxal-dependent decarboxylase protein, putative, expressed K01586: diaminopimelate decarboxylase
6 Sobic.001G025800 pentatricopeptide, putative, expressed -
7 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
8 Sobic.003G182100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
9 Sobic.002G189600 expressed protein -
10 Sobic.010G216300 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase
11 Sobic.002G305100 mTERF domain containing protein, expressed -
12 Sobic.001G436600 pentatricopeptide, putative, expressed -
13 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
14 Sobic.001G158400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@recA protein, putative, expressed K03553: recombination protein RecA
15 Sobic.002G363500 RNA methyltransferase, TrmH family protein, putative, expressed -
16 Sobic.001G013900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
17 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
18 Sobic.002G321400 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
19 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
20 Sobic.001G322600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G111800 Sobic002G111800 Sobic002G235600 Sobic002G235600 Sobic002G111800--Sobic002G235600 Sobic003G399100 Sobic003G399100 Sobic002G111800--Sobic003G399100 Sobic001G027100 Sobic001G027100 Sobic002G111800--Sobic001G027100 Sobic009G251000 Sobic009G251000 Sobic002G111800--Sobic009G251000 Sobic008G038600 Sobic008G038600 Sobic002G111800--Sobic008G038600 Sobic001G025800 Sobic001G025800 Sobic002G111800--Sobic001G025800 Sobic007G026200 Sobic007G026200 Sobic002G111800--Sobic007G026200 Sobic003G182100 Sobic003G182100 Sobic002G111800--Sobic003G182100 Sobic002G189600 Sobic002G189600 Sobic002G111800--Sobic002G189600 Sobic001G158400 Sobic001G158400 Sobic002G235600--Sobic001G158400 Sobic002G360200 Sobic002G360200 Sobic002G235600--Sobic002G360200 Sobic002G235600--Sobic002G111800 Sobic003G136400 Sobic003G136400 Sobic002G235600--Sobic003G136400 Sobic001G013900 Sobic001G013900 Sobic002G235600--Sobic001G013900 Sobic001G228300 Sobic001G228300 Sobic002G235600--Sobic001G228300 Sobic006G114300 Sobic006G114300 Sobic002G235600--Sobic006G114300 Sobic001G188600 Sobic001G188600 Sobic002G235600--Sobic001G188600 Sobic002G201100 Sobic002G201100 Sobic002G235600--Sobic002G201100 Sobic003G399100--Sobic008G038600 Sobic004G354000 Sobic004G354000 Sobic003G399100--Sobic004G354000 Sobic009G005400 Sobic009G005400 Sobic003G399100--Sobic009G005400 Sobic002G305100 Sobic002G305100 Sobic003G399100--Sobic002G305100 Sobic007G132200 Sobic007G132200 Sobic003G399100--Sobic007G132200 Sobic003G267500 Sobic003G267500 Sobic003G399100--Sobic003G267500 Sobic006G128400 Sobic006G128400 Sobic003G399100--Sobic006G128400 Sobic008G017100 Sobic008G017100 Sobic003G399100--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic003G399100--Sobic010G224700 Sobic003G123200 Sobic003G123200 Sobic001G027100--Sobic003G123200 Sobic006G208400 Sobic006G208400 Sobic001G027100--Sobic006G208400 Sobic001G027100--Sobic004G354000 Sobic006G193300 Sobic006G193300 Sobic001G027100--Sobic006G193300 Sobic002G141900 Sobic002G141900 Sobic001G027100--Sobic002G141900 Sobic005G028100 Sobic005G028100 Sobic001G027100--Sobic005G028100 Sobic001G322600 Sobic001G322600 Sobic001G027100--Sobic001G322600 Sobic004G119400 Sobic004G119400 Sobic001G027100--Sobic004G119400 Sobic002G344500 Sobic002G344500 Sobic001G027100--Sobic002G344500 Sobic009G104700 Sobic009G104700 Sobic009G251000--Sobic009G104700 Sobic002G140000 Sobic002G140000 Sobic009G251000--Sobic002G140000 Sobic005G110481 Sobic005G110481 Sobic009G251000--Sobic005G110481 Sobic010G011200 Sobic010G011200 Sobic009G251000--Sobic010G011200 Sobic007G015300 Sobic007G015300 Sobic009G251000--Sobic007G015300 Sobic010G027200 Sobic010G027200 Sobic009G251000--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic009G251000--Sobic006G237100 Sobic007G090537 Sobic007G090537 Sobic009G251000--Sobic007G090537 Sobic002G045700 Sobic002G045700 Sobic009G251000--Sobic002G045700 Sobic002G317100 Sobic002G317100 Sobic008G038600--Sobic002G317100 Sobic008G038600--Sobic006G128400 Sobic002G191100 Sobic002G191100 Sobic008G038600--Sobic002G191100 Sobic008G038600--Sobic007G132200 Sobic001G153300 Sobic001G153300 Sobic008G038600--Sobic001G153300 Sobic008G038600--Sobic006G193300 Sobic004G003900 Sobic004G003900 Sobic008G038600--Sobic004G003900 Sobic002G092050 Sobic002G092050 Sobic008G038600--Sobic002G092050 Sobic008G038600--Sobic003G399100 Sobic001G025800--Sobic004G003900 Sobic005G117300 Sobic005G117300 Sobic001G025800--Sobic005G117300 Sobic001G495200 Sobic001G495200 Sobic001G025800--Sobic001G495200 Sobic002G048200 Sobic002G048200 Sobic001G025800--Sobic002G048200 Sobic001G025800--Sobic009G251000 Sobic001G513800 Sobic001G513800 Sobic001G025800--Sobic001G513800 Sobic001G025800--Sobic003G267500 Sobic001G025800--Sobic007G015300 Sobic009G092900 Sobic009G092900 Sobic001G025800--Sobic009G092900 Sobic001G069500 Sobic001G069500 Sobic007G026200--Sobic001G069500 Sobic007G211100 Sobic007G211100 Sobic007G026200--Sobic007G211100 Sobic007G026200--Sobic001G188600 Sobic004G109000 Sobic004G109000 Sobic007G026200--Sobic004G109000 Sobic007G026200--Sobic002G189600 Sobic006G281066 Sobic006G281066 Sobic007G026200--Sobic006G281066 Sobic010G012900 Sobic010G012900 Sobic007G026200--Sobic010G012900 Sobic001G357200 Sobic001G357200 Sobic007G026200--Sobic001G357200 Sobic004G296800 Sobic004G296800 Sobic007G026200--Sobic004G296800 Sobic003G182100--Sobic002G111800 Sobic010G099300 Sobic010G099300 Sobic003G182100--Sobic010G099300 Sobic003G273300 Sobic003G273300 Sobic003G182100--Sobic003G273300 Sobic007G182600 Sobic007G182600 Sobic003G182100--Sobic007G182600 Sobic008G101900 Sobic008G101900 Sobic003G182100--Sobic008G101900 Sobic003G182100--Sobic004G354000 Sobic006G146900 Sobic006G146900 Sobic003G182100--Sobic006G146900 Sobic001G436600 Sobic001G436600 Sobic003G182100--Sobic001G436600 Sobic003G182100--Sobic001G013900 Sobic010G221600 Sobic010G221600 Sobic002G189600--Sobic010G221600 Sobic002G189600--Sobic007G026200 Sobic001G478600 Sobic001G478600 Sobic002G189600--Sobic001G478600 Sobic004G162500 Sobic004G162500 Sobic002G189600--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic002G189600--Sobic009G160500 Sobic003G292300 Sobic003G292300 Sobic002G189600--Sobic003G292300 Sobic008G011300 Sobic008G011300 Sobic002G189600--Sobic008G011300 Sobic001G441200 Sobic001G441200 Sobic002G189600--Sobic001G441200 Sobic002G189600--Sobic007G211100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.