Gene annotation
Transcriptome id Sobic.002G152200.1,Sobic.002G152200.2,Sobic.002G152200.3
Synonym Sb02g018610
Functional annotation AP2-associated protein kinase 1, putative, expressed
UniProt A0A1B6QBL0
Pfam PF07714
Panther DB PTHR22967 PTHR22967:SF63
NCBI CDD KOG1989; ARK protein kinase family
KEGG Orthology K08853; AP2-associated kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G32850 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g10720.1 : AP2-associated protein kinase 1, putative, expressed
MaizeGDB (Corn) Zm00025a013236
Brachypodium KQJ89648
Barley HORVU5Hr1G053170.12 , HORVU5Hr1G053170.17 , HORVU5Hr1G053170.16 , HORVU5Hr1G053170.3 , HORVU5Hr1G053170.1 , HORVU5Hr1G053170.7
Wheat TraesCS5B02G170700 , TraesCS5D02G177800 , TraesCS5A02G173300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
2 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
3 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
4 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
5 Sobic.006G138400 regulatory subunit, putative, expressed -
6 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
7 Sobic.009G121100 expressed protein -
8 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
9 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
10 Sobic.002G113300 expressed protein -
11 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
12 Sobic.004G037900 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
13 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
14 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
15 Sobic.001G373100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
16 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
17 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
18 Sobic.001G373200 lipase precursor, putative, expressed -
19 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
20 Sobic.002G303000 disease resistant protein, identical, putative, expressed -


Gene co-expression network
sample Sobic002G152200 Sobic002G152200 Sobic001G156100 Sobic001G156100 Sobic002G152200--Sobic001G156100 Sobic009G229800 Sobic009G229800 Sobic002G152200--Sobic009G229800 Sobic007G202600 Sobic007G202600 Sobic002G152200--Sobic007G202600 Sobic001G427100 Sobic001G427100 Sobic002G152200--Sobic001G427100 Sobic006G138400 Sobic006G138400 Sobic002G152200--Sobic006G138400 Sobic003G145900 Sobic003G145900 Sobic002G152200--Sobic003G145900 Sobic009G121100 Sobic009G121100 Sobic002G152200--Sobic009G121100 Sobic001G443900 Sobic001G443900 Sobic002G152200--Sobic001G443900 Sobic004G330900 Sobic004G330900 Sobic002G152200--Sobic004G330900 Sobic001G156100--Sobic009G121100 Sobic001G447500 Sobic001G447500 Sobic001G156100--Sobic001G447500 Sobic006G214500 Sobic006G214500 Sobic001G156100--Sobic006G214500 Sobic001G156100--Sobic002G152200 Sobic001G156100--Sobic009G229800 Sobic008G160700 Sobic008G160700 Sobic001G156100--Sobic008G160700 Sobic009G027000 Sobic009G027000 Sobic001G156100--Sobic009G027000 Sobic001G373200 Sobic001G373200 Sobic001G156100--Sobic001G373200 Sobic004G295800 Sobic004G295800 Sobic001G156100--Sobic004G295800 Sobic003G407300 Sobic003G407300 Sobic009G229800--Sobic003G407300 Sobic009G229800--Sobic001G156100 Sobic004G060900 Sobic004G060900 Sobic009G229800--Sobic004G060900 Sobic009G229800--Sobic001G373200 Sobic009G229800--Sobic009G121100 Sobic009G229800--Sobic001G443900 Sobic002G419800 Sobic002G419800 Sobic009G229800--Sobic002G419800 Sobic009G057300 Sobic009G057300 Sobic009G229800--Sobic009G057300 Sobic007G172400 Sobic007G172400 Sobic009G229800--Sobic007G172400 Sobic010G083000 Sobic010G083000 Sobic007G202600--Sobic010G083000 Sobic007G041500 Sobic007G041500 Sobic007G202600--Sobic007G041500 Sobic002G189400 Sobic002G189400 Sobic007G202600--Sobic002G189400 Sobic007G202600--Sobic004G330900 Sobic004G282400 Sobic004G282400 Sobic007G202600--Sobic004G282400 Sobic010G188400 Sobic010G188400 Sobic007G202600--Sobic010G188400 Sobic007G202600--Sobic002G152200 Sobic009G193300 Sobic009G193300 Sobic007G202600--Sobic009G193300 Sobic006G114500 Sobic006G114500 Sobic007G202600--Sobic006G114500 Sobic003G305200 Sobic003G305200 Sobic001G427100--Sobic003G305200 Sobic001G427100--Sobic009G121100 Sobic001G474700 Sobic001G474700 Sobic001G427100--Sobic001G474700 Sobic001G427100--Sobic004G295800 Sobic001G427100--Sobic001G156100 Sobic009G126900 Sobic009G126900 Sobic001G427100--Sobic009G126900 Sobic003G005600 Sobic003G005600 Sobic001G427100--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic001G427100--Sobic003G329400 Sobic001G427100--Sobic001G373200 Sobic006G138400--Sobic006G214500 Sobic003G408500 Sobic003G408500 Sobic006G138400--Sobic003G408500 Sobic006G138400--Sobic009G121100 Sobic002G046800 Sobic002G046800 Sobic006G138400--Sobic002G046800 Sobic006G138400--Sobic003G407300 Sobic010G001500 Sobic010G001500 Sobic006G138400--Sobic010G001500 Sobic008G009900 Sobic008G009900 Sobic006G138400--Sobic008G009900 Sobic007G024700 Sobic007G024700 Sobic006G138400--Sobic007G024700 Sobic003G005800 Sobic003G005800 Sobic006G138400--Sobic003G005800 Sobic009G235900 Sobic009G235900 Sobic003G145900--Sobic009G235900 Sobic003G145900--Sobic008G160700 Sobic005G007800 Sobic005G007800 Sobic003G145900--Sobic005G007800 Sobic003G145900--Sobic004G330900 Sobic001G221100 Sobic001G221100 Sobic003G145900--Sobic001G221100 Sobic010G042900 Sobic010G042900 Sobic003G145900--Sobic010G042900 Sobic002G303000 Sobic002G303000 Sobic003G145900--Sobic002G303000 Sobic003G145900--Sobic006G114500 Sobic004G037900 Sobic004G037900 Sobic003G145900--Sobic004G037900 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic009G121100--Sobic001G156100 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic009G121100--Sobic002G303000 Sobic001G443900--Sobic006G214500 Sobic001G443900--Sobic009G121100 Sobic001G443900--Sobic003G005800 Sobic001G443900--Sobic001G373200 Sobic001G443900--Sobic003G407300 Sobic001G443900--Sobic006G138400 Sobic001G443900--Sobic001G447500 Sobic001G443900--Sobic001G156100 Sobic001G443900--Sobic009G229800 Sobic004G330900--Sobic003G145900 Sobic004G330900--Sobic009G121100 Sobic004G330900--Sobic004G282400 Sobic004G330900--Sobic001G221100 Sobic004G330900--Sobic007G202600 Sobic004G330900--Sobic002G303000 Sobic004G330900--Sobic009G229800 Sobic006G058600 Sobic006G058600 Sobic004G330900--Sobic006G058600 Sobic004G330900--Sobic001G443900
Octagon: transcription factors


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