Gene annotation
Transcriptome id Sobic.002G179000.1
Synonym PRMT1B, Sb02g022770, ATPRMT11, ATPRMT1B, PRMT11
Functional annotation methyltransferase, putative, expressed
UniProt C5XAM2
Pfam PF13847
Panther DB PTHR11006
NCBI CDD -
KEGG Orthology K11434; type I protein arginine methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0006479protein methylation


Orthologs (automatic annotation)
TAIR AT4G29510 : arginine methyltransferase 11
RAP-DB (Rice) LOC_Os09g19560.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a046629
Brachypodium KQJ89935 , KQJ89936
Barley HORVU5Hr1G056790.4 , HORVU5Hr1G056790.5 , HORVU5Hr1G056790.6 , HORVU5Hr1G056790.7 , HORVU5Hr1G056790.1 , HORVU5Hr1G056790.2 , HORVU5Hr1G056790.3 , HORVU5Hr1G056790.8 , HORVU5Hr1G056790.9
Wheat TraesCS5D02G195000 , TraesCS5A02G196000 , TraesCS5A02G196000 , TraesCS5A02G196000 , TraesCS5B02G187400
Populus -


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cDNA sequences
Sobic.002G179000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
2 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
3 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
4 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
5 Sobic.010G039200 cysteine synthase, putative, expressed K01738: cysteine synthase
6 Sobic.001G224200 nucleolin, putative, expressed K11294: NCL, nucleolin
7 Sobic.008G171800 WD domain, G-beta repeat domain containing protein, expressed K14830: MAK11, protein MAK11
8 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase
9 Sobic.009G071700 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
10 Sobic.007G137350 - K14549: U3 small nucleolar RNA-associated protein 15
11 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
12 Sobic.006G198600 WD domain, G-beta repeat domain containing protein, expressed K14555: UTP13, U3 small nucleolar RNA-associated protein 13
13 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
14 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
15 Sobic.001G457200 mitochondrial carrier protein, putative, expressed -
16 Sobic.001G416300 expressed protein -
17 Sobic.007G188600 tRNA synthetase class II core domain containing protein, expressed K01880: GARS, glycyl-tRNA synthetase
18 Sobic.010G013900 DAG protein, chloroplast precursor, putative, expressed -
19 Sobic.010G018000 39S ribosomal protein L47, mitochondrial precursor, putative, expressed K17428: MRPL47, large subunit ribosomal protein L47
20 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase


Gene co-expression network
sample Sobic002G179000 Sobic002G179000 Sobic008G103900 Sobic008G103900 Sobic002G179000--Sobic008G103900 Sobic001G022600 Sobic001G022600 Sobic002G179000--Sobic001G022600 Sobic007G168200 Sobic007G168200 Sobic002G179000--Sobic007G168200 Sobic006G157000 Sobic006G157000 Sobic002G179000--Sobic006G157000 Sobic010G039200 Sobic010G039200 Sobic002G179000--Sobic010G039200 Sobic001G224200 Sobic001G224200 Sobic002G179000--Sobic001G224200 Sobic008G171800 Sobic008G171800 Sobic002G179000--Sobic008G171800 Sobic001G069600 Sobic001G069600 Sobic002G179000--Sobic001G069600 Sobic009G071700 Sobic009G071700 Sobic002G179000--Sobic009G071700 Sobic007G034400 Sobic007G034400 Sobic008G103900--Sobic007G034400 Sobic010G013900 Sobic010G013900 Sobic008G103900--Sobic010G013900 Sobic001G202400 Sobic001G202400 Sobic008G103900--Sobic001G202400 Sobic004G248900 Sobic004G248900 Sobic008G103900--Sobic004G248900 Sobic009G130400 Sobic009G130400 Sobic008G103900--Sobic009G130400 Sobic008G103900--Sobic002G179000 Sobic010G018000 Sobic010G018000 Sobic008G103900--Sobic010G018000 Sobic003G015400 Sobic003G015400 Sobic008G103900--Sobic003G015400 Sobic007G143000 Sobic007G143000 Sobic008G103900--Sobic007G143000 Sobic009G190800 Sobic009G190800 Sobic001G022600--Sobic009G190800 Sobic004G214100 Sobic004G214100 Sobic001G022600--Sobic004G214100 Sobic002G193400 Sobic002G193400 Sobic001G022600--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic001G022600--Sobic008G142600 Sobic002G117200 Sobic002G117200 Sobic001G022600--Sobic002G117200 Sobic001G427500 Sobic001G427500 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic003G359900 Sobic003G359900 Sobic001G022600--Sobic003G359900 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic001G294200 Sobic001G294200 Sobic007G168200--Sobic001G294200 Sobic006G269000 Sobic006G269000 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic007G168200--Sobic004G214100 Sobic003G103200 Sobic003G103200 Sobic007G168200--Sobic003G103200 Sobic003G309300 Sobic003G309300 Sobic006G157000--Sobic003G309300 Sobic006G157000--Sobic009G071700 Sobic009G072000 Sobic009G072000 Sobic006G157000--Sobic009G072000 Sobic010G216300 Sobic010G216300 Sobic006G157000--Sobic010G216300 Sobic001G468600 Sobic001G468600 Sobic006G157000--Sobic001G468600 Sobic008G017200 Sobic008G017200 Sobic006G157000--Sobic008G017200 Sobic006G010400 Sobic006G010400 Sobic006G157000--Sobic006G010400 Sobic004G124100 Sobic004G124100 Sobic006G157000--Sobic004G124100 Sobic007G114000 Sobic007G114000 Sobic006G157000--Sobic007G114000 Sobic001G114400 Sobic001G114400 Sobic010G039200--Sobic001G114400 Sobic005G145300 Sobic005G145300 Sobic010G039200--Sobic005G145300 Sobic004G296000 Sobic004G296000 Sobic010G039200--Sobic004G296000 Sobic010G039200--Sobic001G224200 Sobic004G290000 Sobic004G290000 Sobic010G039200--Sobic004G290000 Sobic001G207200 Sobic001G207200 Sobic010G039200--Sobic001G207200 Sobic003G297800 Sobic003G297800 Sobic010G039200--Sobic003G297800 Sobic009G094700 Sobic009G094700 Sobic010G039200--Sobic009G094700 Sobic004G265900 Sobic004G265900 Sobic010G039200--Sobic004G265900 Sobic008G165900 Sobic008G165900 Sobic001G224200--Sobic008G165900 Sobic006G128400 Sobic006G128400 Sobic001G224200--Sobic006G128400 Sobic001G224200--Sobic001G207200 Sobic007G075800 Sobic007G075800 Sobic001G224200--Sobic007G075800 Sobic002G238000 Sobic002G238000 Sobic001G224200--Sobic002G238000 Sobic001G119600 Sobic001G119600 Sobic001G224200--Sobic001G119600 Sobic003G332900 Sobic003G332900 Sobic001G224200--Sobic003G332900 Sobic001G501400 Sobic001G501400 Sobic001G224200--Sobic001G501400 Sobic004G030800 Sobic004G030800 Sobic001G224200--Sobic004G030800 Sobic002G206500 Sobic002G206500 Sobic008G171800--Sobic002G206500 Sobic003G407600 Sobic003G407600 Sobic008G171800--Sobic003G407600 Sobic002G262100 Sobic002G262100 Sobic008G171800--Sobic002G262100 Sobic004G173100 Sobic004G173100 Sobic008G171800--Sobic004G173100 Sobic006G198600 Sobic006G198600 Sobic008G171800--Sobic006G198600 Sobic008G185900 Sobic008G185900 Sobic008G171800--Sobic008G185900 Sobic001G141300 Sobic001G141300 Sobic008G171800--Sobic001G141300 Sobic004G130200 Sobic004G130200 Sobic008G171800--Sobic004G130200 Sobic003G401400 Sobic003G401400 Sobic008G171800--Sobic003G401400 Sobic004G086700 Sobic004G086700 Sobic001G069600--Sobic004G086700 Sobic002G404200 Sobic002G404200 Sobic001G069600--Sobic002G404200 Sobic010G265300 Sobic010G265300 Sobic001G069600--Sobic010G265300 Sobic002G083900 Sobic002G083900 Sobic001G069600--Sobic002G083900 Sobic001G043800 Sobic001G043800 Sobic001G069600--Sobic001G043800 Sobic003G324100 Sobic003G324100 Sobic001G069600--Sobic003G324100 Sobic008G193300 Sobic008G193300 Sobic001G069600--Sobic008G193300 Sobic001G069600--Sobic004G265900 Sobic001G429300 Sobic001G429300 Sobic001G069600--Sobic001G429300 Sobic006G251600 Sobic006G251600 Sobic009G071700--Sobic006G251600 Sobic001G457200 Sobic001G457200 Sobic009G071700--Sobic001G457200 Sobic009G071700--Sobic006G198600 Sobic009G071700--Sobic004G173100 Sobic007G137350 Sobic007G137350 Sobic009G071700--Sobic007G137350 Sobic006G225400 Sobic006G225400 Sobic009G071700--Sobic006G225400 Sobic005G100900 Sobic005G100900 Sobic009G071700--Sobic005G100900 Sobic003G425100 Sobic003G425100 Sobic009G071700--Sobic003G425100 Sobic007G092200 Sobic007G092200 Sobic009G071700--Sobic007G092200
Octagon: transcription factors


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