Gene annotation
Transcriptome id Sobic.002G206800.1,Sobic.002G206800.2
Synonym Sb02g025130
Functional annotation 5-nucleotidase domain-containing protein, putative, expressed
UniProt C5XCY6
Pfam PF05761
Panther DB PTHR12103 PTHR12103:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23890 : HAD-superfamily hydrolase, subfamily IG, 5\'-nucleotidase
RAP-DB (Rice) LOC_Os09g25640.1 : 5-nucleotidase domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a047071
Brachypodium KQJ90297
Barley HORVU5Hr1G063970.1 , HORVU5Hr1G063960.3 , HORVU5Hr1G063960.2 , HORVU5Hr1G063960.1 , HORVU5Hr1G063960.7 , HORVU5Hr1G063960.6 , HORVU5Hr1G063960.5 , HORVU5Hr1G063960.4 , HORVU5Hr1G063960.9 , HORVU5Hr1G063960.8 , HORVU5Hr1G063960.13 , HORVU5Hr1G063960.12 , HORVU5Hr1G063960.11 , HORVU5Hr1G063960.10 , HORVU5Hr1G063960.15 , HORVU5Hr1G063960.14
Wheat TraesCS5D02G228800 , TraesCS5A02G221100 , TraesCS5B02G219900
Populus -


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cDNA sequences
Sobic.002G206800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G132100 OsFBX172 - F-box domain containing protein, expressed -
2 Sobic.007G011800 - K13095: splicing factor 1
3 Sobic.004G193200 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
4 Sobic.003G182600 protein phosphatase 2C containing protein, expressed -
5 Sobic.006G062200 DNA cross-link repair 1A protein, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
6 Sobic.001G517100 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.010G089800 expressed protein -
8 Sobic.007G112200 ENT domain containing protein, expressed -
9 Sobic.003G024200 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
10 Sobic.003G433200 BAS1, putative, expressed -
11 Sobic.004G271200 OsWAK17 - OsWAK short gene, expressed K14649: transcription initiation factor TFIID subunit 8
12 Sobic.006G268600 SAR DNA-binding protein-like, putative, expressed -
13 Sobic.002G181700 metallo-beta-lactamase family protein, putative, expressed -
14 Sobic.003G019600 - -
15 Sobic.002G252600 pob, putative, expressed -
16 Sobic.003G203400 serine/threonine-protein kinase AFC3, putative, expressed K08287: dual-specificity kinase
17 Sobic.003G252000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
18 Sobic.008G088806 - K16280: E3 ubiquitin-protein ligase RGLG
19 Sobic.001G422600 expressed protein -
20 Sobic.004G123400 MYB family transcription factor, putative, expressed K09420: MYB, transcriptional activator Myb


Gene co-expression network
sample Sobic002G206800 Sobic002G206800 Sobic009G132100 Sobic009G132100 Sobic002G206800--Sobic009G132100 Sobic007G011800 Sobic007G011800 Sobic002G206800--Sobic007G011800 Sobic004G193200 Sobic004G193200 Sobic002G206800--Sobic004G193200 Sobic003G182600 Sobic003G182600 Sobic002G206800--Sobic003G182600 Sobic006G062200 Sobic006G062200 Sobic002G206800--Sobic006G062200 Sobic001G517100 Sobic001G517100 Sobic002G206800--Sobic001G517100 Sobic010G089800 Sobic010G089800 Sobic002G206800--Sobic010G089800 Sobic007G112200 Sobic007G112200 Sobic002G206800--Sobic007G112200 Sobic003G024200 Sobic003G024200 Sobic002G206800--Sobic003G024200 Sobic009G132100--Sobic003G182600 Sobic001G422600 Sobic001G422600 Sobic009G132100--Sobic001G422600 Sobic010G220700 Sobic010G220700 Sobic009G132100--Sobic010G220700 Sobic003G019600 Sobic003G019600 Sobic009G132100--Sobic003G019600 Sobic008G173800 Sobic008G173800 Sobic009G132100--Sobic008G173800 Sobic009G197901 Sobic009G197901 Sobic009G132100--Sobic009G197901 Sobic005G186600 Sobic005G186600 Sobic009G132100--Sobic005G186600 Sobic009G237300 Sobic009G237300 Sobic009G132100--Sobic009G237300 Sobic004G046500 Sobic004G046500 Sobic009G132100--Sobic004G046500 Sobic006G207300 Sobic006G207300 Sobic007G011800--Sobic006G207300 Sobic003G062300 Sobic003G062300 Sobic007G011800--Sobic003G062300 Sobic003G416700 Sobic003G416700 Sobic007G011800--Sobic003G416700 Sobic003G212900 Sobic003G212900 Sobic007G011800--Sobic003G212900 Sobic002G145800 Sobic002G145800 Sobic007G011800--Sobic002G145800 Sobic006G224800 Sobic006G224800 Sobic007G011800--Sobic006G224800 Sobic001G542450 Sobic001G542450 Sobic007G011800--Sobic001G542450 Sobic002G154000 Sobic002G154000 Sobic007G011800--Sobic002G154000 Sobic001G461400 Sobic001G461400 Sobic007G011800--Sobic001G461400 Sobic002G128750 Sobic002G128750 Sobic004G193200--Sobic002G128750 Sobic002G192700 Sobic002G192700 Sobic004G193200--Sobic002G192700 Sobic001G370100 Sobic001G370100 Sobic004G193200--Sobic001G370100 Sobic001G177500 Sobic001G177500 Sobic004G193200--Sobic001G177500 Sobic004G193200--Sobic009G237300 Sobic010G266000 Sobic010G266000 Sobic004G193200--Sobic010G266000 Sobic003G064150 Sobic003G064150 Sobic004G193200--Sobic003G064150 Sobic002G289701 Sobic002G289701 Sobic004G193200--Sobic002G289701 Sobic001G489225 Sobic001G489225 Sobic004G193200--Sobic001G489225 Sobic003G182600--Sobic009G132100 Sobic008G001200 Sobic008G001200 Sobic003G182600--Sobic008G001200 Sobic007G116200 Sobic007G116200 Sobic003G182600--Sobic007G116200 Sobic003G155100 Sobic003G155100 Sobic003G182600--Sobic003G155100 Sobic001G375100 Sobic001G375100 Sobic003G182600--Sobic001G375100 Sobic001G527800 Sobic001G527800 Sobic003G182600--Sobic001G527800 Sobic002G345700 Sobic002G345700 Sobic003G182600--Sobic002G345700 Sobic001G194200 Sobic001G194200 Sobic003G182600--Sobic001G194200 Sobic003G205200 Sobic003G205200 Sobic003G182600--Sobic003G205200 Sobic001G521900 Sobic001G521900 Sobic006G062200--Sobic001G521900 Sobic002G252600 Sobic002G252600 Sobic006G062200--Sobic002G252600 Sobic004G159600 Sobic004G159600 Sobic006G062200--Sobic004G159600 Sobic006G062200--Sobic002G128750 Sobic009G063450 Sobic009G063450 Sobic006G062200--Sobic009G063450 Sobic001G535300 Sobic001G535300 Sobic006G062200--Sobic001G535300 Sobic006G045200 Sobic006G045200 Sobic006G062200--Sobic006G045200 Sobic006G062200--Sobic004G193200 Sobic001G444100 Sobic001G444100 Sobic006G062200--Sobic001G444100 Sobic001G517100--Sobic003G182600 Sobic003G138500 Sobic003G138500 Sobic001G517100--Sobic003G138500 Sobic001G517100--Sobic010G220700 Sobic004G193700 Sobic004G193700 Sobic001G517100--Sobic004G193700 Sobic010G013800 Sobic010G013800 Sobic001G517100--Sobic010G013800 Sobic001G096833 Sobic001G096833 Sobic001G517100--Sobic001G096833 Sobic001G318432 Sobic001G318432 Sobic001G517100--Sobic001G318432 Sobic001G517100--Sobic007G116200 Sobic006G092000 Sobic006G092000 Sobic001G517100--Sobic006G092000 Sobic006G080400 Sobic006G080400 Sobic010G089800--Sobic006G080400 Sobic010G205600 Sobic010G205600 Sobic010G089800--Sobic010G205600 Sobic006G036100 Sobic006G036100 Sobic010G089800--Sobic006G036100 Sobic001G453000 Sobic001G453000 Sobic010G089800--Sobic001G453000 Sobic001G451300 Sobic001G451300 Sobic010G089800--Sobic001G451300 Sobic001G004400 Sobic001G004400 Sobic010G089800--Sobic001G004400 Sobic010G188000 Sobic010G188000 Sobic010G089800--Sobic010G188000 Sobic001G248100 Sobic001G248100 Sobic010G089800--Sobic001G248100 Sobic006G169500 Sobic006G169500 Sobic010G089800--Sobic006G169500 Sobic003G379200 Sobic003G379200 Sobic007G112200--Sobic003G379200 Sobic007G177300 Sobic007G177300 Sobic007G112200--Sobic007G177300 Sobic004G088501 Sobic004G088501 Sobic007G112200--Sobic004G088501 Sobic004G223300 Sobic004G223300 Sobic007G112200--Sobic004G223300 Sobic006G200700 Sobic006G200700 Sobic007G112200--Sobic006G200700 Sobic001G382600 Sobic001G382600 Sobic007G112200--Sobic001G382600 Sobic001G090100 Sobic001G090100 Sobic007G112200--Sobic001G090100 Sobic003G337300 Sobic003G337300 Sobic007G112200--Sobic003G337300 Sobic003G163200 Sobic003G163200 Sobic007G112200--Sobic003G163200 Sobic006G205100 Sobic006G205100 Sobic003G024200--Sobic006G205100 Sobic002G130800 Sobic002G130800 Sobic003G024200--Sobic002G130800 Sobic010G251000 Sobic010G251000 Sobic003G024200--Sobic010G251000 Sobic001G382000 Sobic001G382000 Sobic003G024200--Sobic001G382000 Sobic004G122600 Sobic004G122600 Sobic003G024200--Sobic004G122600 Sobic003G024200--Sobic010G013800 Sobic008G124700 Sobic008G124700 Sobic003G024200--Sobic008G124700 Sobic003G229300 Sobic003G229300 Sobic003G024200--Sobic003G229300 Sobic004G118200 Sobic004G118200 Sobic003G024200--Sobic004G118200
Octagon: transcription factors


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