Gene annotation
Transcriptome id Sobic.002G216200.1
Synonym TT7, D501, Sb02g025830, CYP75B1
Functional annotation cytochrome P450, putative, expressed
UniProt C5XDQ3
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF51
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G07990 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os09g26960.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a047152 , Zm00025a014011 , Zm00025a002571
Brachypodium KQJ90411
Barley HORVU7Hr1G042260.6 , HORVU7Hr1G042260.5 , HORVU7Hr1G042260.4 , HORVU7Hr1G042260.3 , HORVU7Hr1G042260.2 , HORVU7Hr1G042260.1 , HORVU7Hr1G042260.8 , HORVU1Hr1G087130.1 , HORVU5Hr1G061340.4 , HORVU5Hr1G061340.1 , HORVU5Hr1G061340.2 , HORVU7Hr1G042260.7
Wheat TraesCS6D02G063100 , TraesCS6D02G063100 , TraesCS5A02G207700 , TraesCS1B02G067500 , TraesCS2D02G581700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
2 Sobic.010G132800 - -
3 Sobic.002G117900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
4 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
5 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
6 Sobic.004G114300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
7 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
8 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.003G204501 - -
10 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
11 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.004G163300 protein kinase domain containing protein, expressed K14510: serine/threonine-protein kinase CTR1
13 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
14 Sobic.005G152200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
15 Sobic.007G128600 CC-NBS-LRR protein, putative, expressed -
16 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
18 Sobic.002G017600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
20 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase


Gene co-expression network
sample Sobic002G216200 Sobic002G216200 Sobic003G080900 Sobic003G080900 Sobic002G216200--Sobic003G080900 Sobic010G132800 Sobic010G132800 Sobic002G216200--Sobic010G132800 Sobic002G117900 Sobic002G117900 Sobic002G216200--Sobic002G117900 Sobic005G024900 Sobic005G024900 Sobic002G216200--Sobic005G024900 Sobic009G177400 Sobic009G177400 Sobic002G216200--Sobic009G177400 Sobic004G114300 Sobic004G114300 Sobic002G216200--Sobic004G114300 Sobic006G157700 Sobic006G157700 Sobic002G216200--Sobic006G157700 Sobic002G114800 Sobic002G114800 Sobic002G216200--Sobic002G114800 Sobic003G204501 Sobic003G204501 Sobic002G216200--Sobic003G204501 Sobic003G080900--Sobic002G117900 Sobic009G084300 Sobic009G084300 Sobic003G080900--Sobic009G084300 Sobic003G229200 Sobic003G229200 Sobic003G080900--Sobic003G229200 Sobic007G120000 Sobic007G120000 Sobic003G080900--Sobic007G120000 Sobic009G161401 Sobic009G161401 Sobic003G080900--Sobic009G161401 Sobic002G155400 Sobic002G155400 Sobic003G080900--Sobic002G155400 Sobic003G273700 Sobic003G273700 Sobic003G080900--Sobic003G273700 Sobic004G106900 Sobic004G106900 Sobic003G080900--Sobic004G106900 Sobic007G196300 Sobic007G196300 Sobic003G080900--Sobic007G196300 Sobic006G239800 Sobic006G239800 Sobic010G132800--Sobic006G239800 Sobic010G132800--Sobic002G216200 Sobic010G239700 Sobic010G239700 Sobic010G132800--Sobic010G239700 Sobic001G120300 Sobic001G120300 Sobic010G132800--Sobic001G120300 Sobic006G222100 Sobic006G222100 Sobic010G132800--Sobic006G222100 Sobic002G009600 Sobic002G009600 Sobic010G132800--Sobic002G009600 Sobic010G132800--Sobic002G117900 Sobic010G132800--Sobic006G157700 Sobic003G354400 Sobic003G354400 Sobic010G132800--Sobic003G354400 Sobic003G440900 Sobic003G440900 Sobic002G117900--Sobic003G440900 Sobic002G117900--Sobic007G120000 Sobic002G117900--Sobic003G080900 Sobic002G117900--Sobic005G024900 Sobic002G117900--Sobic009G084300 Sobic007G021200 Sobic007G021200 Sobic002G117900--Sobic007G021200 Sobic002G117900--Sobic007G196300 Sobic003G106300 Sobic003G106300 Sobic002G117900--Sobic003G106300 Sobic002G117900--Sobic002G155400 Sobic002G087800 Sobic002G087800 Sobic005G024900--Sobic002G087800 Sobic001G132000 Sobic001G132000 Sobic005G024900--Sobic001G132000 Sobic003G061400 Sobic003G061400 Sobic005G024900--Sobic003G061400 Sobic005G024900--Sobic003G440900 Sobic003G241500 Sobic003G241500 Sobic005G024900--Sobic003G241500 Sobic004G333200 Sobic004G333200 Sobic005G024900--Sobic004G333200 Sobic006G244400 Sobic006G244400 Sobic005G024900--Sobic006G244400 Sobic005G152200 Sobic005G152200 Sobic005G024900--Sobic005G152200 Sobic006G127100 Sobic006G127100 Sobic005G024900--Sobic006G127100 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic009G177400--Sobic003G354400 Sobic010G274500 Sobic010G274500 Sobic009G177400--Sobic010G274500 Sobic002G175500 Sobic002G175500 Sobic009G177400--Sobic002G175500 Sobic004G163300 Sobic004G163300 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic006G091800 Sobic006G091800 Sobic004G114300--Sobic006G091800 Sobic005G178400 Sobic005G178400 Sobic004G114300--Sobic005G178400 Sobic007G110366 Sobic007G110366 Sobic004G114300--Sobic007G110366 Sobic006G104700 Sobic006G104700 Sobic004G114300--Sobic006G104700 Sobic002G238600 Sobic002G238600 Sobic004G114300--Sobic002G238600 Sobic001G065900 Sobic001G065900 Sobic004G114300--Sobic001G065900 Sobic004G172800 Sobic004G172800 Sobic004G114300--Sobic004G172800 Sobic003G303400 Sobic003G303400 Sobic004G114300--Sobic003G303400 Sobic007G094300 Sobic007G094300 Sobic004G114300--Sobic007G094300 Sobic006G157700--Sobic006G239800 Sobic006G157700--Sobic006G127100 Sobic006G157700--Sobic005G024900 Sobic003G241000 Sobic003G241000 Sobic006G157700--Sobic003G241000 Sobic006G157700--Sobic003G241500 Sobic003G061800 Sobic003G061800 Sobic006G157700--Sobic003G061800 Sobic006G157700--Sobic002G175500 Sobic006G157700--Sobic003G354400 Sobic004G345800 Sobic004G345800 Sobic006G157700--Sobic004G345800 Sobic001G049200 Sobic001G049200 Sobic002G114800--Sobic001G049200 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G306700 Sobic002G306700 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic001G540100 Sobic001G540100 Sobic002G114800--Sobic001G540100 Sobic004G008800 Sobic004G008800 Sobic003G204501--Sobic004G008800 Sobic002G013000 Sobic002G013000 Sobic003G204501--Sobic002G013000 Sobic002G088900 Sobic002G088900 Sobic003G204501--Sobic002G088900 Sobic002G089100 Sobic002G089100 Sobic003G204501--Sobic002G089100 Sobic006G246600 Sobic006G246600 Sobic003G204501--Sobic006G246600 Sobic007G109900 Sobic007G109900 Sobic003G204501--Sobic007G109900 Sobic001G316400 Sobic001G316400 Sobic003G204501--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic003G204501--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G204501--Sobic009G114000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.