Gene annotation
Transcriptome id Sobic.010G132800.2
Synonym
Functional annotation -
UniProt A0A194YIV4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G239800 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
2 Sobic.002G216200 cytochrome P450, putative, expressed -
3 Sobic.010G239700 cysteine-rich RLK (RECEPTOR-like protein kinase) 10(PubMedID : 28640841)@TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
5 Sobic.006G222100 dehydrogenase, putative, expressed -
6 Sobic.002G009600 AMP-binding domain containing protein, expressed -
7 Sobic.002G117900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
8 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
9 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
10 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
12 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
13 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
14 Sobic.005G086100 glutathione S-transferase, N-terminal domain containing protein, expressed K01800: maiA, maleylacetoacetate isomerase
15 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.002G325800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.007G021500 carrier, putative, expressed -
18 Sobic.008G144401 - -
19 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -


Gene co-expression network
sample Sobic010G132800 Sobic010G132800 Sobic006G239800 Sobic006G239800 Sobic010G132800--Sobic006G239800 Sobic002G216200 Sobic002G216200 Sobic010G132800--Sobic002G216200 Sobic010G239700 Sobic010G239700 Sobic010G132800--Sobic010G239700 Sobic001G120300 Sobic001G120300 Sobic010G132800--Sobic001G120300 Sobic006G222100 Sobic006G222100 Sobic010G132800--Sobic006G222100 Sobic002G009600 Sobic002G009600 Sobic010G132800--Sobic002G009600 Sobic002G117900 Sobic002G117900 Sobic010G132800--Sobic002G117900 Sobic006G157700 Sobic006G157700 Sobic010G132800--Sobic006G157700 Sobic003G354400 Sobic003G354400 Sobic010G132800--Sobic003G354400 Sobic006G239800--Sobic006G157700 Sobic005G044800 Sobic005G044800 Sobic006G239800--Sobic005G044800 Sobic001G057200 Sobic001G057200 Sobic006G239800--Sobic001G057200 Sobic006G239800--Sobic006G222100 Sobic009G177400 Sobic009G177400 Sobic006G239800--Sobic009G177400 Sobic010G274500 Sobic010G274500 Sobic006G239800--Sobic010G274500 Sobic006G176600 Sobic006G176600 Sobic006G239800--Sobic006G176600 Sobic006G239800--Sobic003G354400 Sobic006G239800--Sobic001G120300 Sobic003G080900 Sobic003G080900 Sobic002G216200--Sobic003G080900 Sobic002G216200--Sobic010G132800 Sobic002G216200--Sobic002G117900 Sobic005G024900 Sobic005G024900 Sobic002G216200--Sobic005G024900 Sobic002G216200--Sobic009G177400 Sobic004G114300 Sobic004G114300 Sobic002G216200--Sobic004G114300 Sobic002G216200--Sobic006G157700 Sobic002G114800 Sobic002G114800 Sobic002G216200--Sobic002G114800 Sobic003G204501 Sobic003G204501 Sobic002G216200--Sobic003G204501 Sobic006G049300 Sobic006G049300 Sobic010G239700--Sobic006G049300 Sobic007G007000 Sobic007G007000 Sobic010G239700--Sobic007G007000 Sobic004G006200 Sobic004G006200 Sobic010G239700--Sobic004G006200 Sobic003G344900 Sobic003G344900 Sobic010G239700--Sobic003G344900 Sobic009G217100 Sobic009G217100 Sobic010G239700--Sobic009G217100 Sobic001G137300 Sobic001G137300 Sobic010G239700--Sobic001G137300 Sobic001G123000 Sobic001G123000 Sobic010G239700--Sobic001G123000 Sobic002G113100 Sobic002G113100 Sobic010G239700--Sobic002G113100 Sobic004G348300 Sobic004G348300 Sobic010G239700--Sobic004G348300 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic004G127700 Sobic004G127700 Sobic001G120300--Sobic004G127700 Sobic010G084000 Sobic010G084000 Sobic001G120300--Sobic010G084000 Sobic001G120300--Sobic001G123000 Sobic010G205800 Sobic010G205800 Sobic001G120300--Sobic010G205800 Sobic001G000200 Sobic001G000200 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic002G092300 Sobic002G092300 Sobic001G120300--Sobic002G092300 Sobic006G222100--Sobic006G176600 Sobic006G222100--Sobic005G044800 Sobic010G193900 Sobic010G193900 Sobic006G222100--Sobic010G193900 Sobic003G273600 Sobic003G273600 Sobic006G222100--Sobic003G273600 Sobic010G123400 Sobic010G123400 Sobic006G222100--Sobic010G123400 Sobic006G222100--Sobic006G239800 Sobic006G244700 Sobic006G244700 Sobic006G222100--Sobic006G244700 Sobic002G361300 Sobic002G361300 Sobic006G222100--Sobic002G361300 Sobic003G299000 Sobic003G299000 Sobic006G222100--Sobic003G299000 Sobic001G359400 Sobic001G359400 Sobic002G009600--Sobic001G359400 Sobic009G183200 Sobic009G183200 Sobic002G009600--Sobic009G183200 Sobic010G264100 Sobic010G264100 Sobic002G009600--Sobic010G264100 Sobic002G009600--Sobic001G120300 Sobic005G007800 Sobic005G007800 Sobic002G009600--Sobic005G007800 Sobic009G235900 Sobic009G235900 Sobic002G009600--Sobic009G235900 Sobic001G168400 Sobic001G168400 Sobic002G009600--Sobic001G168400 Sobic002G009600--Sobic001G394600 Sobic002G303000 Sobic002G303000 Sobic002G009600--Sobic002G303000 Sobic003G440900 Sobic003G440900 Sobic002G117900--Sobic003G440900 Sobic007G120000 Sobic007G120000 Sobic002G117900--Sobic007G120000 Sobic002G117900--Sobic003G080900 Sobic002G117900--Sobic005G024900 Sobic009G084300 Sobic009G084300 Sobic002G117900--Sobic009G084300 Sobic007G021200 Sobic007G021200 Sobic002G117900--Sobic007G021200 Sobic007G196300 Sobic007G196300 Sobic002G117900--Sobic007G196300 Sobic003G106300 Sobic003G106300 Sobic002G117900--Sobic003G106300 Sobic002G155400 Sobic002G155400 Sobic002G117900--Sobic002G155400 Sobic006G157700--Sobic006G239800 Sobic006G127100 Sobic006G127100 Sobic006G157700--Sobic006G127100 Sobic006G157700--Sobic005G024900 Sobic003G241000 Sobic003G241000 Sobic006G157700--Sobic003G241000 Sobic003G241500 Sobic003G241500 Sobic006G157700--Sobic003G241500 Sobic003G061800 Sobic003G061800 Sobic006G157700--Sobic003G061800 Sobic002G175500 Sobic002G175500 Sobic006G157700--Sobic002G175500 Sobic006G157700--Sobic003G354400 Sobic004G345800 Sobic004G345800 Sobic006G157700--Sobic004G345800 Sobic003G354400--Sobic003G061800 Sobic003G329400 Sobic003G329400 Sobic003G354400--Sobic003G329400 Sobic009G057300 Sobic009G057300 Sobic003G354400--Sobic009G057300 Sobic010G130200 Sobic010G130200 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic003G354400--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.