Gene annotation
Transcriptome id Sobic.002G243200.1
Synonym SbNHX5;Sodium Proton Exchanger 6, ERD8,Sodium Proton Antiporter 5, Sb02g028020, HSP81-2, SbNHE6, HSP90.2, AtHsp90.2
Functional annotation similar to Heat shock protein 81-2 (PubMedID : 29862293)
- (PubMedID : 29751546)
- (PubMedID : 29751546)
heat shock protein, putative, expressed
UniProt C5X3T6
Pfam PF02518 PF00183
Panther DB PTHR11528 PTHR11528:SF49
NCBI CDD -
KEGG Orthology K04079; HSP90A, molecular chaperone HtpG
Gene Ontology GO:0006950; response to stress GO:0006457protein folding GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G56000 : HEAT SHOCK PROTEIN 81.4
RAP-DB (Rice) LOC_Os09g30412.1 : heat shock protein, putative, expressed
MaizeGDB (Corn) Zm00025a047409 , Zm00025a014190 , Zm00025a005014 , Zm00025a033768 , Zm00025a055468
Brachypodium PNT68367 , KQJ98864 , KQJ98867 , KQJ81650 , KQJ98871
Barley HORVU7Hr1G049340.2 , HORVU5Hr1G072420.8 , HORVU5Hr1G072420.9 , HORVU5Hr1G072420.4 , HORVU5Hr1G072420.5 , HORVU5Hr1G072420.6 , HORVU5Hr1G072420.7 , HORVU5Hr1G072420.1 , HORVU5Hr1G072420.2 , HORVU5Hr1G072420.3 , HORVU7Hr1G049340.1 , HORVU5Hr1G072420.10 , HORVU5Hr1G072420.11 , HORVU7Hr1G049370.4 , HORVU7Hr1G049370.5 , HORVU7Hr1G049370.1 , HORVU7Hr1G049370.2 , HORVU7Hr1G049370.3
Wheat TraesCS5A02G260600 , TraesCS5A02G260600 , TraesCS5A02G260600 , TraesCS5A02G260600 , TraesCS2D02G033200 , TraesCS2D02G033200 , TraesCS2B02G047400 , TraesCS6D02G046900 , TraesCS6D02G046900 , TraesCS7A02G242200 , TraesCS2A02G033700 , TraesCS7B02G149200 , TraesCS5B02G258900 , TraesCS5B02G258900 , TraesCS7D02G241100 , TraesCS7B02G149200 , TraesCS5B02G258900 , TraesCS5B02G258900 , TraesCS5D02G268000 , TraesCS5D02G268000 , TraesCS5D02G268000
Populus PNT60319 , PNT60321 , PNT60320 , PNT60322 , PNS96918 , PNS96919


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cDNA sequences
Sobic.002G243200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G182700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ZOS5-11 - C2H2 zinc finger protein, expressed K13104: ZNF830, zinc finger protein 830
2 Sobic.009G234400 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
3 Sobic.009G219400 NUC189 domain containing protein, expressed K14546: UTP5, U3 small nucleolar RNA-associated protein 5
4 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
5 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
6 Sobic.001G214200 lysM domain containing protein, putative, expressed -
7 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
8 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
9 Sobic.001G050700 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
10 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
11 Sobic.003G196200 elongation factor TS family protein, expressed -
12 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
13 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
14 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
15 Sobic.009G222900 ribosomal protein, putative, expressed K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
16 Sobic.001G193500 DnaK family protein, putative, expressed K04043: dnaK, molecular chaperone DnaK
17 Sobic.002G141700 unc-50, putative, expressed -
18 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
19 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
20 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2


Gene co-expression network
sample Sobic002G243200 Sobic002G243200 Sobic009G182700 Sobic009G182700 Sobic002G243200--Sobic009G182700 Sobic009G234400 Sobic009G234400 Sobic002G243200--Sobic009G234400 Sobic009G219400 Sobic009G219400 Sobic002G243200--Sobic009G219400 Sobic001G416600 Sobic001G416600 Sobic002G243200--Sobic001G416600 Sobic004G039400 Sobic004G039400 Sobic002G243200--Sobic004G039400 Sobic001G214200 Sobic001G214200 Sobic002G243200--Sobic001G214200 Sobic002G087000 Sobic002G087000 Sobic002G243200--Sobic002G087000 Sobic001G112400 Sobic001G112400 Sobic002G243200--Sobic001G112400 Sobic001G050700 Sobic001G050700 Sobic002G243200--Sobic001G050700 Sobic009G182700--Sobic002G243200 Sobic009G077600 Sobic009G077600 Sobic009G182700--Sobic009G077600 Sobic010G185700 Sobic010G185700 Sobic009G182700--Sobic010G185700 Sobic009G182700--Sobic001G416600 Sobic009G222900 Sobic009G222900 Sobic009G182700--Sobic009G222900 Sobic004G207900 Sobic004G207900 Sobic009G182700--Sobic004G207900 Sobic010G169300 Sobic010G169300 Sobic009G182700--Sobic010G169300 Sobic001G049400 Sobic001G049400 Sobic009G182700--Sobic001G049400 Sobic001G193500 Sobic001G193500 Sobic009G182700--Sobic001G193500 Sobic009G212300 Sobic009G212300 Sobic009G234400--Sobic009G212300 Sobic006G211800 Sobic006G211800 Sobic009G234400--Sobic006G211800 Sobic002G341800 Sobic002G341800 Sobic009G234400--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic009G234400--Sobic001G404100 Sobic005G105500 Sobic005G105500 Sobic009G234400--Sobic005G105500 Sobic003G028100 Sobic003G028100 Sobic009G234400--Sobic003G028100 Sobic001G481700 Sobic001G481700 Sobic009G234400--Sobic001G481700 Sobic006G231500 Sobic006G231500 Sobic009G234400--Sobic006G231500 Sobic009G234400--Sobic002G087000 Sobic002G394600 Sobic002G394600 Sobic009G219400--Sobic002G394600 Sobic009G219400--Sobic009G222900 Sobic005G003800 Sobic005G003800 Sobic009G219400--Sobic005G003800 Sobic004G310500 Sobic004G310500 Sobic009G219400--Sobic004G310500 Sobic009G190300 Sobic009G190300 Sobic009G219400--Sobic009G190300 Sobic009G219400--Sobic002G243200 Sobic009G219400--Sobic001G050700 Sobic008G016100 Sobic008G016100 Sobic009G219400--Sobic008G016100 Sobic009G219400--Sobic002G341800 Sobic007G178200 Sobic007G178200 Sobic001G416600--Sobic007G178200 Sobic008G016900 Sobic008G016900 Sobic001G416600--Sobic008G016900 Sobic001G409900 Sobic001G409900 Sobic001G416600--Sobic001G409900 Sobic002G362900 Sobic002G362900 Sobic001G416600--Sobic002G362900 Sobic003G392200 Sobic003G392200 Sobic001G416600--Sobic003G392200 Sobic001G416600--Sobic002G243200 Sobic007G188100 Sobic007G188100 Sobic001G416600--Sobic007G188100 Sobic001G442900 Sobic001G442900 Sobic001G416600--Sobic001G442900 Sobic009G104000 Sobic009G104000 Sobic001G416600--Sobic009G104000 Sobic001G008100 Sobic001G008100 Sobic004G039400--Sobic001G008100 Sobic001G073600 Sobic001G073600 Sobic004G039400--Sobic001G073600 Sobic010G040900 Sobic010G040900 Sobic004G039400--Sobic010G040900 Sobic001G443200 Sobic001G443200 Sobic004G039400--Sobic001G443200 Sobic002G262200 Sobic002G262200 Sobic004G039400--Sobic002G262200 Sobic009G191400 Sobic009G191400 Sobic004G039400--Sobic009G191400 Sobic004G344800 Sobic004G344800 Sobic004G039400--Sobic004G344800 Sobic001G387200 Sobic001G387200 Sobic004G039400--Sobic001G387200 Sobic002G079700 Sobic002G079700 Sobic004G039400--Sobic002G079700 Sobic010G026700 Sobic010G026700 Sobic001G214200--Sobic010G026700 Sobic001G122500 Sobic001G122500 Sobic001G214200--Sobic001G122500 Sobic001G050400 Sobic001G050400 Sobic001G214200--Sobic001G050400 Sobic003G023500 Sobic003G023500 Sobic001G214200--Sobic003G023500 Sobic002G395600 Sobic002G395600 Sobic001G214200--Sobic002G395600 Sobic001G408100 Sobic001G408100 Sobic001G214200--Sobic001G408100 Sobic010G017000 Sobic010G017000 Sobic001G214200--Sobic010G017000 Sobic002G214900 Sobic002G214900 Sobic001G214200--Sobic002G214900 Sobic010G235200 Sobic010G235200 Sobic001G214200--Sobic010G235200 Sobic001G035400 Sobic001G035400 Sobic002G087000--Sobic001G035400 Sobic002G141700 Sobic002G141700 Sobic002G087000--Sobic002G141700 Sobic002G087000--Sobic001G443200 Sobic002G087000--Sobic009G234400 Sobic001G196100 Sobic001G196100 Sobic002G087000--Sobic001G196100 Sobic007G176200 Sobic007G176200 Sobic002G087000--Sobic007G176200 Sobic003G224300 Sobic003G224300 Sobic002G087000--Sobic003G224300 Sobic002G087000--Sobic006G211800 Sobic002G087000--Sobic005G105500 Sobic001G112400--Sobic002G262200 Sobic001G112400--Sobic001G443200 Sobic005G184200 Sobic005G184200 Sobic001G112400--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G112400--Sobic001G378200 Sobic004G347600 Sobic004G347600 Sobic001G112400--Sobic004G347600 Sobic001G112400--Sobic004G039400 Sobic001G112400--Sobic004G344800 Sobic002G396700 Sobic002G396700 Sobic001G112400--Sobic002G396700 Sobic001G465400 Sobic001G465400 Sobic001G112400--Sobic001G465400 Sobic002G309500 Sobic002G309500 Sobic001G050700--Sobic002G309500 Sobic001G050700--Sobic001G112400 Sobic001G050700--Sobic004G344800 Sobic001G387800 Sobic001G387800 Sobic001G050700--Sobic001G387800 Sobic001G050700--Sobic004G039400 Sobic003G116600 Sobic003G116600 Sobic001G050700--Sobic003G116600 Sobic007G114200 Sobic007G114200 Sobic001G050700--Sobic007G114200 Sobic001G050700--Sobic005G184200 Sobic001G178500 Sobic001G178500 Sobic001G050700--Sobic001G178500
Octagon: transcription factors


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