Gene annotation
Transcriptome id Sobic.009G219400.1,Sobic.009G219400.2
Synonym Sb09g027390
Functional annotation NUC189 domain containing protein, expressed
UniProt A0A1B6PA39 , A0A1B6P9T2
Pfam PF04003
Panther DB -
NCBI CDD -
KEGG Orthology K14546; UTP5, U3 small nucleolar RNA-associated protein 5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15420 : -
RAP-DB (Rice) LOC_Os01g46060.1 : NUC189 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044443
Brachypodium -
Barley HORVU0Hr1G036550.1 , HORVU5Hr1G001320.1 , HORVU5Hr1G001320.3 , HORVU5Hr1G001320.2 , HORVU5Hr1G001320.4
Wheat TraesCS5D02G015900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
2 Sobic.009G222900 ribosomal protein, putative, expressed K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
3 Sobic.005G003800 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
4 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
5 Sobic.009G190300 Brix domain containing protein, putative, expressed K14847: ribosome production factor 2
6 Sobic.002G243200 similar to Heat shock protein 81-2(PubMedID : 29862293)@-(PubMedID : 29751546)@-(PubMedID : 29751546)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
7 Sobic.001G050700 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
8 Sobic.008G016100 WD domain, G-beta repeat domain containing protein, expressed K14848: RRB1, ribosome assembly protein RRB1
9 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
10 Sobic.003G196200 elongation factor TS family protein, expressed -
11 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
12 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K
13 Sobic.002G413400 ribosomal protein, putative, expressed K14842: ribosome biogenesis protein NSA2
14 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
15 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
16 Sobic.002G113800 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
17 Sobic.006G135900 cell division control protein 48 homolog B, putative, expressed -
18 Sobic.010G046300 rRNA-processing protein FCF, putative, expressed K14566: UTP24, U3 small nucleolar RNA-associated protein 24
19 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
20 Sobic.008G110500 UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed K07432: beta-1,4-N-acetylglucosaminyltransferase


Gene co-expression network
sample Sobic009G219400 Sobic009G219400 Sobic002G394600 Sobic002G394600 Sobic009G219400--Sobic002G394600 Sobic009G222900 Sobic009G222900 Sobic009G219400--Sobic009G222900 Sobic005G003800 Sobic005G003800 Sobic009G219400--Sobic005G003800 Sobic004G310500 Sobic004G310500 Sobic009G219400--Sobic004G310500 Sobic009G190300 Sobic009G190300 Sobic009G219400--Sobic009G190300 Sobic002G243200 Sobic002G243200 Sobic009G219400--Sobic002G243200 Sobic001G050700 Sobic001G050700 Sobic009G219400--Sobic001G050700 Sobic008G016100 Sobic008G016100 Sobic009G219400--Sobic008G016100 Sobic002G341800 Sobic002G341800 Sobic009G219400--Sobic002G341800 Sobic002G394600--Sobic002G341800 Sobic006G044600 Sobic006G044600 Sobic002G394600--Sobic006G044600 Sobic002G014400 Sobic002G014400 Sobic002G394600--Sobic002G014400 Sobic001G251600 Sobic001G251600 Sobic002G394600--Sobic001G251600 Sobic002G394600--Sobic009G190300 Sobic004G194900 Sobic004G194900 Sobic002G394600--Sobic004G194900 Sobic001G404100 Sobic001G404100 Sobic002G394600--Sobic001G404100 Sobic007G177300 Sobic007G177300 Sobic002G394600--Sobic007G177300 Sobic002G394600--Sobic004G310500 Sobic009G222900--Sobic009G219400 Sobic001G404200 Sobic001G404200 Sobic009G222900--Sobic001G404200 Sobic001G061200 Sobic001G061200 Sobic009G222900--Sobic001G061200 Sobic006G094600 Sobic006G094600 Sobic009G222900--Sobic006G094600 Sobic003G214300 Sobic003G214300 Sobic009G222900--Sobic003G214300 Sobic001G204100 Sobic001G204100 Sobic009G222900--Sobic001G204100 Sobic004G025300 Sobic004G025300 Sobic009G222900--Sobic004G025300 Sobic009G004400 Sobic009G004400 Sobic009G222900--Sobic009G004400 Sobic010G205300 Sobic010G205300 Sobic009G222900--Sobic010G205300 Sobic008G004000 Sobic008G004000 Sobic005G003800--Sobic008G004000 Sobic005G003800--Sobic009G190300 Sobic001G018800 Sobic001G018800 Sobic005G003800--Sobic001G018800 Sobic010G100000 Sobic010G100000 Sobic005G003800--Sobic010G100000 Sobic001G481700 Sobic001G481700 Sobic005G003800--Sobic001G481700 Sobic009G232000 Sobic009G232000 Sobic005G003800--Sobic009G232000 Sobic009G065400 Sobic009G065400 Sobic005G003800--Sobic009G065400 Sobic002G364100 Sobic002G364100 Sobic005G003800--Sobic002G364100 Sobic010G046300 Sobic010G046300 Sobic005G003800--Sobic010G046300 Sobic004G310500--Sobic004G194900 Sobic009G075800 Sobic009G075800 Sobic004G310500--Sobic009G075800 Sobic004G310500--Sobic006G044600 Sobic001G283200 Sobic001G283200 Sobic004G310500--Sobic001G283200 Sobic009G257600 Sobic009G257600 Sobic004G310500--Sobic009G257600 Sobic008G156700 Sobic008G156700 Sobic004G310500--Sobic008G156700 Sobic001G512300 Sobic001G512300 Sobic004G310500--Sobic001G512300 Sobic004G310500--Sobic002G394600 Sobic009G222500 Sobic009G222500 Sobic004G310500--Sobic009G222500 Sobic009G190300--Sobic005G003800 Sobic009G190300--Sobic008G004000 Sobic009G190300--Sobic001G481700 Sobic009G190300--Sobic002G341800 Sobic003G338100 Sobic003G338100 Sobic009G190300--Sobic003G338100 Sobic009G190300--Sobic002G394600 Sobic001G091900 Sobic001G091900 Sobic009G190300--Sobic001G091900 Sobic009G190300--Sobic001G404100 Sobic004G216400 Sobic004G216400 Sobic009G190300--Sobic004G216400 Sobic009G182700 Sobic009G182700 Sobic002G243200--Sobic009G182700 Sobic009G234400 Sobic009G234400 Sobic002G243200--Sobic009G234400 Sobic002G243200--Sobic009G219400 Sobic001G416600 Sobic001G416600 Sobic002G243200--Sobic001G416600 Sobic004G039400 Sobic004G039400 Sobic002G243200--Sobic004G039400 Sobic001G214200 Sobic001G214200 Sobic002G243200--Sobic001G214200 Sobic002G087000 Sobic002G087000 Sobic002G243200--Sobic002G087000 Sobic001G112400 Sobic001G112400 Sobic002G243200--Sobic001G112400 Sobic002G243200--Sobic001G050700 Sobic002G309500 Sobic002G309500 Sobic001G050700--Sobic002G309500 Sobic001G050700--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G050700--Sobic004G344800 Sobic001G387800 Sobic001G387800 Sobic001G050700--Sobic001G387800 Sobic001G050700--Sobic004G039400 Sobic003G116600 Sobic003G116600 Sobic001G050700--Sobic003G116600 Sobic007G114200 Sobic007G114200 Sobic001G050700--Sobic007G114200 Sobic005G184200 Sobic005G184200 Sobic001G050700--Sobic005G184200 Sobic001G178500 Sobic001G178500 Sobic001G050700--Sobic001G178500 Sobic003G408300 Sobic003G408300 Sobic008G016100--Sobic003G408300 Sobic002G116500 Sobic002G116500 Sobic008G016100--Sobic002G116500 Sobic001G382200 Sobic001G382200 Sobic008G016100--Sobic001G382200 Sobic006G135900 Sobic006G135900 Sobic008G016100--Sobic006G135900 Sobic009G258500 Sobic009G258500 Sobic008G016100--Sobic009G258500 Sobic001G193500 Sobic001G193500 Sobic008G016100--Sobic001G193500 Sobic001G471000 Sobic001G471000 Sobic008G016100--Sobic001G471000 Sobic008G016100--Sobic009G219400 Sobic001G007800 Sobic001G007800 Sobic008G016100--Sobic001G007800 Sobic001G458700 Sobic001G458700 Sobic002G341800--Sobic001G458700 Sobic002G341800--Sobic001G404100 Sobic002G341800--Sobic001G481700 Sobic007G176200 Sobic007G176200 Sobic002G341800--Sobic007G176200 Sobic002G341800--Sobic006G044600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic008G137600 Sobic008G137600 Sobic002G341800--Sobic008G137600 Sobic004G081800 Sobic004G081800 Sobic002G341800--Sobic004G081800
Octagon: transcription factors


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