Gene annotation
Transcriptome id Sobic.002G264500.1
Synonym Sb02g029910
Functional annotation expressed protein
UniProt C5X5E9
Pfam PF06075
Panther DB PTHR31928 PTHR31928:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08760 : Plant protein of unknown function (DUF936)
RAP-DB (Rice) LOC_Os09g34110.1 : expressed protein
MaizeGDB (Corn) Zm00025a047685 , Zm00025a005338 , Zm00025a014349
Brachypodium KQJ91055 , KQJ91054 , KQJ99219 , KQJ99218
Barley HORVU5Hr1G079460.5 , HORVU5Hr1G079460.4 , HORVU5Hr1G079460.7 , HORVU5Hr1G079460.6 , HORVU5Hr1G079460.1 , HORVU5Hr1G079460.3 , HORVU5Hr1G079460.2 , HORVU5Hr1G079460.8
Wheat TraesCS5B02G303400 , TraesCS7D02G268500 , TraesCS7D02G268500 , TraesCS5A02G303100 , TraesCS7A02G266300 , TraesCS7A02G266300 , TraesCS5D02G309900 , TraesCS7B02G166200 , TraesCS7B02G166200
Populus -


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cDNA sequences
Sobic.002G264500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050400 - K12811: DDX46, ATP-dependent RNA helicase DDX46/PRP5
2 Sobic.010G008700 expressed protein -
3 Sobic.010G269500 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
4 Sobic.005G033300 microfibrillar-associated protein 1, putative, expressed K13110: microfibrillar-associated protein 1
5 Sobic.001G121900 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
6 Sobic.001G237700 RNA recognition motif containing protein, putative, expressed K13091: RBM39, RNA-binding protein 39
7 Sobic.004G327400 zinc finger CCCH-type with G patch domain-containing protein, putative, expressed -
8 Sobic.009G244700 dnaJ domain containing protein, expressed -
9 Sobic.002G337300 expressed protein -
10 Sobic.004G288600 STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
11 Sobic.002G054600 BHLH transcription factor, putative, expressed -
12 Sobic.005G111000 receptor protein kinase TMK1 precursor, putative, expressed -
13 Sobic.001G019400 protein kinase family protein, putative, expressed -
14 Sobic.006G239000 "FLO2(Ortholog in rice:She et al., 2010)"(PubMedID : 31659901)@tetratricopeptide repeat domain containing protein, putative, expressed K03255: TIF31, protein TIF31
15 Sobic.001G039500 protein kinase domain containing protein, expressed -
16 Sobic.010G015900 transcriptional corepressor SEUSS, putative, expressed -
17 Sobic.001G423700 - K13171: SRRM1, serine/arginine repetitive matrix protein 1
18 Sobic.001G041400 PAPA-1-like conserved region family protein, expressed -
19 Sobic.002G355000 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@WRKY87, expressed -
20 Sobic.001G352600 expressed protein -


Gene co-expression network
sample Sobic002G264500 Sobic002G264500 Sobic007G050400 Sobic007G050400 Sobic002G264500--Sobic007G050400 Sobic010G008700 Sobic010G008700 Sobic002G264500--Sobic010G008700 Sobic010G269500 Sobic010G269500 Sobic002G264500--Sobic010G269500 Sobic005G033300 Sobic005G033300 Sobic002G264500--Sobic005G033300 Sobic001G121900 Sobic001G121900 Sobic002G264500--Sobic001G121900 Sobic001G237700 Sobic001G237700 Sobic002G264500--Sobic001G237700 Sobic004G327400 Sobic004G327400 Sobic002G264500--Sobic004G327400 Sobic009G244700 Sobic009G244700 Sobic002G264500--Sobic009G244700 Sobic002G337300 Sobic002G337300 Sobic002G264500--Sobic002G337300 Sobic007G050400--Sobic001G237700 Sobic007G050400--Sobic010G269500 Sobic007G050400--Sobic002G337300 Sobic001G423700 Sobic001G423700 Sobic007G050400--Sobic001G423700 Sobic003G037900 Sobic003G037900 Sobic007G050400--Sobic003G037900 Sobic004G134500 Sobic004G134500 Sobic007G050400--Sobic004G134500 Sobic007G050400--Sobic004G327400 Sobic007G013500 Sobic007G013500 Sobic007G050400--Sobic007G013500 Sobic009G255300 Sobic009G255300 Sobic007G050400--Sobic009G255300 Sobic003G162900 Sobic003G162900 Sobic010G008700--Sobic003G162900 Sobic002G200200 Sobic002G200200 Sobic010G008700--Sobic002G200200 Sobic001G448600 Sobic001G448600 Sobic010G008700--Sobic001G448600 Sobic008G078400 Sobic008G078400 Sobic010G008700--Sobic008G078400 Sobic004G255500 Sobic004G255500 Sobic010G008700--Sobic004G255500 Sobic006G112600 Sobic006G112600 Sobic010G008700--Sobic006G112600 Sobic007G123600 Sobic007G123600 Sobic010G008700--Sobic007G123600 Sobic001G337600 Sobic001G337600 Sobic010G008700--Sobic001G337600 Sobic004G328400 Sobic004G328400 Sobic010G008700--Sobic004G328400 Sobic010G269500--Sobic007G050400 Sobic003G189800 Sobic003G189800 Sobic010G269500--Sobic003G189800 Sobic004G300500 Sobic004G300500 Sobic010G269500--Sobic004G300500 Sobic010G269500--Sobic003G037900 Sobic001G362800 Sobic001G362800 Sobic010G269500--Sobic001G362800 Sobic006G157300 Sobic006G157300 Sobic010G269500--Sobic006G157300 Sobic004G242300 Sobic004G242300 Sobic010G269500--Sobic004G242300 Sobic001G316700 Sobic001G316700 Sobic010G269500--Sobic001G316700 Sobic003G365400 Sobic003G365400 Sobic010G269500--Sobic003G365400 Sobic001G053800 Sobic001G053800 Sobic005G033300--Sobic001G053800 Sobic005G196900 Sobic005G196900 Sobic005G033300--Sobic005G196900 Sobic007G222800 Sobic007G222800 Sobic005G033300--Sobic007G222800 Sobic007G216900 Sobic007G216900 Sobic005G033300--Sobic007G216900 Sobic002G180000 Sobic002G180000 Sobic005G033300--Sobic002G180000 Sobic002G224700 Sobic002G224700 Sobic005G033300--Sobic002G224700 Sobic004G153200 Sobic004G153200 Sobic005G033300--Sobic004G153200 Sobic004G264300 Sobic004G264300 Sobic005G033300--Sobic004G264300 Sobic009G162200 Sobic009G162200 Sobic005G033300--Sobic009G162200 Sobic002G233900 Sobic002G233900 Sobic001G121900--Sobic002G233900 Sobic006G262100 Sobic006G262100 Sobic001G121900--Sobic006G262100 Sobic001G494100 Sobic001G494100 Sobic001G121900--Sobic001G494100 Sobic003G023400 Sobic003G023400 Sobic001G121900--Sobic003G023400 Sobic005G111000 Sobic005G111000 Sobic001G121900--Sobic005G111000 Sobic001G121900--Sobic009G244700 Sobic010G135300 Sobic010G135300 Sobic001G121900--Sobic010G135300 Sobic002G374400 Sobic002G374400 Sobic001G121900--Sobic002G374400 Sobic002G098500 Sobic002G098500 Sobic001G121900--Sobic002G098500 Sobic001G237700--Sobic001G423700 Sobic007G017400 Sobic007G017400 Sobic001G237700--Sobic007G017400 Sobic005G195800 Sobic005G195800 Sobic001G237700--Sobic005G195800 Sobic001G237700--Sobic007G050400 Sobic002G425800 Sobic002G425800 Sobic001G237700--Sobic002G425800 Sobic001G237700--Sobic004G327400 Sobic001G237700--Sobic002G337300 Sobic004G354700 Sobic004G354700 Sobic001G237700--Sobic004G354700 Sobic002G166500 Sobic002G166500 Sobic001G237700--Sobic002G166500 Sobic004G327400--Sobic001G237700 Sobic009G209300 Sobic009G209300 Sobic004G327400--Sobic009G209300 Sobic004G327400--Sobic001G423700 Sobic009G191100 Sobic009G191100 Sobic004G327400--Sobic009G191100 Sobic010G255300 Sobic010G255300 Sobic004G327400--Sobic010G255300 Sobic001G161800 Sobic001G161800 Sobic004G327400--Sobic001G161800 Sobic004G327400--Sobic007G050400 Sobic004G182900 Sobic004G182900 Sobic004G327400--Sobic004G182900 Sobic005G063000 Sobic005G063000 Sobic004G327400--Sobic005G063000 Sobic001G492300 Sobic001G492300 Sobic009G244700--Sobic001G492300 Sobic004G154700 Sobic004G154700 Sobic009G244700--Sobic004G154700 Sobic010G009800 Sobic010G009800 Sobic009G244700--Sobic010G009800 Sobic005G143900 Sobic005G143900 Sobic009G244700--Sobic005G143900 Sobic005G132000 Sobic005G132000 Sobic009G244700--Sobic005G132000 Sobic004G355700 Sobic004G355700 Sobic009G244700--Sobic004G355700 Sobic010G014100 Sobic010G014100 Sobic009G244700--Sobic010G014100 Sobic002G188600 Sobic002G188600 Sobic009G244700--Sobic002G188600 Sobic005G038500 Sobic005G038500 Sobic009G244700--Sobic005G038500 Sobic002G337300--Sobic001G423700 Sobic002G337300--Sobic007G017400 Sobic002G337300--Sobic007G050400 Sobic002G337300--Sobic001G237700 Sobic003G408800 Sobic003G408800 Sobic002G337300--Sobic003G408800 Sobic002G297800 Sobic002G297800 Sobic002G337300--Sobic002G297800 Sobic007G156101 Sobic007G156101 Sobic002G337300--Sobic007G156101 Sobic003G176900 Sobic003G176900 Sobic002G337300--Sobic003G176900 Sobic006G204200 Sobic006G204200 Sobic002G337300--Sobic006G204200
Octagon: transcription factors


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