Gene annotation
Transcriptome id Sobic.001G039500.2
Synonym Sb01g003640
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6QH74
Pfam PF14531
Panther DB PTHR23257 PTHR23257:SF531
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01850 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g60150.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008751
Brachypodium KQK12500
Barley HORVU5Hr1G111670.8 , HORVU5Hr1G111670.5 , HORVU5Hr1G111670.4 , HORVU5Hr1G111670.7 , HORVU5Hr1G111670.6 , HORVU5Hr1G111670.1 , HORVU5Hr1G111670.3 , HORVU5Hr1G111670.2
Wheat TraesCS5A02G469200 , TraesCS5B02G481700 , TraesCS5D02G482000
Populus -


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cDNA sequences
Sobic.001G039500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G015900 transcriptional corepressor SEUSS, putative, expressed -
2 Sobic.004G023900 3-isopropylmalate dehydratase large subunit 2, putative, expressed K01703: leuC, 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
3 Sobic.002G400400 choline transporter-related, putative, expressed -
4 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.006G245100 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
6 Sobic.008G115000 Fibronectin type III domain containing protein, expressed -
7 Sobic.007G041300 expressed protein -
8 Sobic.006G120800 transglutaminase, putative, expressed -
9 Sobic.001G033400 protein kinase domain containing protein, expressed -
10 Sobic.007G201800 DNA repair ATPase-related, putative, expressed -
11 Sobic.003G004500 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
13 Sobic.007G123900 WD-40 repeat family protein, putative, expressed -
14 Sobic.007G128500 expressed protein -
15 Sobic.007G217600 pentatricopeptide, putative, expressed -
16 Sobic.010G021200 GAGA-binding protein, putative, expressed -
17 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
18 Sobic.006G051900 expressed protein -
19 Sobic.002G029100 GYF domain containing protein, putative, expressed -
20 Sobic.003G436500 ubiquitin-fold modifier 1 precursor, putative, expressed K12162: ubiquitin-fold modifier 1


Gene co-expression network
sample Sobic001G039500 Sobic001G039500 Sobic010G015900 Sobic010G015900 Sobic001G039500--Sobic010G015900 Sobic004G023900 Sobic004G023900 Sobic001G039500--Sobic004G023900 Sobic002G400400 Sobic002G400400 Sobic001G039500--Sobic002G400400 Sobic003G159500 Sobic003G159500 Sobic001G039500--Sobic003G159500 Sobic006G245100 Sobic006G245100 Sobic001G039500--Sobic006G245100 Sobic008G115000 Sobic008G115000 Sobic001G039500--Sobic008G115000 Sobic007G041300 Sobic007G041300 Sobic001G039500--Sobic007G041300 Sobic006G120800 Sobic006G120800 Sobic001G039500--Sobic006G120800 Sobic001G033400 Sobic001G033400 Sobic001G039500--Sobic001G033400 Sobic007G042300 Sobic007G042300 Sobic010G015900--Sobic007G042300 Sobic001G480550 Sobic001G480550 Sobic010G015900--Sobic001G480550 Sobic010G015900--Sobic001G039500 Sobic010G021200 Sobic010G021200 Sobic010G015900--Sobic010G021200 Sobic002G029100 Sobic002G029100 Sobic010G015900--Sobic002G029100 Sobic001G501800 Sobic001G501800 Sobic010G015900--Sobic001G501800 Sobic010G154000 Sobic010G154000 Sobic010G015900--Sobic010G154000 Sobic010G015900--Sobic003G159500 Sobic002G272250 Sobic002G272250 Sobic010G015900--Sobic002G272250 Sobic003G190500 Sobic003G190500 Sobic004G023900--Sobic003G190500 Sobic004G023900--Sobic001G039500 Sobic009G127300 Sobic009G127300 Sobic004G023900--Sobic009G127300 Sobic004G023900--Sobic006G245100 Sobic004G018000 Sobic004G018000 Sobic004G023900--Sobic004G018000 Sobic004G023900--Sobic003G159500 Sobic002G390300 Sobic002G390300 Sobic004G023900--Sobic002G390300 Sobic001G008700 Sobic001G008700 Sobic004G023900--Sobic001G008700 Sobic002G119400 Sobic002G119400 Sobic004G023900--Sobic002G119400 Sobic002G400400--Sobic001G033400 Sobic002G103700 Sobic002G103700 Sobic002G400400--Sobic002G103700 Sobic003G436500 Sobic003G436500 Sobic002G400400--Sobic003G436500 Sobic008G160500 Sobic008G160500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic002G400400--Sobic003G159500 Sobic007G050300 Sobic007G050300 Sobic002G400400--Sobic007G050300 Sobic010G207400 Sobic010G207400 Sobic002G400400--Sobic010G207400 Sobic002G400400--Sobic001G039500 Sobic006G179600 Sobic006G179600 Sobic003G159500--Sobic006G179600 Sobic006G061100 Sobic006G061100 Sobic003G159500--Sobic006G061100 Sobic003G159500--Sobic010G207400 Sobic009G132600 Sobic009G132600 Sobic003G159500--Sobic009G132600 Sobic010G071600 Sobic010G071600 Sobic003G159500--Sobic010G071600 Sobic010G273800 Sobic010G273800 Sobic003G159500--Sobic010G273800 Sobic003G159500--Sobic007G042300 Sobic002G403200 Sobic002G403200 Sobic003G159500--Sobic002G403200 Sobic003G159500--Sobic008G160500 Sobic001G534600 Sobic001G534600 Sobic006G245100--Sobic001G534600 Sobic006G245100--Sobic002G119400 Sobic004G154300 Sobic004G154300 Sobic006G245100--Sobic004G154300 Sobic002G105200 Sobic002G105200 Sobic006G245100--Sobic002G105200 Sobic010G186600 Sobic010G186600 Sobic006G245100--Sobic010G186600 Sobic006G087100 Sobic006G087100 Sobic006G245100--Sobic006G087100 Sobic004G091200 Sobic004G091200 Sobic006G245100--Sobic004G091200 Sobic006G245100--Sobic001G039500 Sobic006G245100--Sobic002G029100 Sobic002G165800 Sobic002G165800 Sobic008G115000--Sobic002G165800 Sobic007G046200 Sobic007G046200 Sobic008G115000--Sobic007G046200 Sobic007G018200 Sobic007G018200 Sobic008G115000--Sobic007G018200 Sobic007G026000 Sobic007G026000 Sobic008G115000--Sobic007G026000 Sobic005G207500 Sobic005G207500 Sobic008G115000--Sobic005G207500 Sobic002G353600 Sobic002G353600 Sobic008G115000--Sobic002G353600 Sobic003G212900 Sobic003G212900 Sobic008G115000--Sobic003G212900 Sobic004G180900 Sobic004G180900 Sobic008G115000--Sobic004G180900 Sobic002G067800 Sobic002G067800 Sobic008G115000--Sobic002G067800 Sobic007G102700 Sobic007G102700 Sobic007G041300--Sobic007G102700 Sobic001G473600 Sobic001G473600 Sobic007G041300--Sobic001G473600 Sobic007G191700 Sobic007G191700 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic003G438900 Sobic003G438900 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic007G041300--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic007G041300--Sobic003G427100 Sobic001G038100 Sobic001G038100 Sobic006G120800--Sobic001G038100 Sobic007G117100 Sobic007G117100 Sobic006G120800--Sobic007G117100 Sobic009G258400 Sobic009G258400 Sobic006G120800--Sobic009G258400 Sobic001G507400 Sobic001G507400 Sobic006G120800--Sobic001G507400 Sobic006G120800--Sobic007G050300 Sobic006G261100 Sobic006G261100 Sobic006G120800--Sobic006G261100 Sobic006G120800--Sobic010G154000 Sobic010G253100 Sobic010G253100 Sobic006G120800--Sobic010G253100 Sobic001G335500 Sobic001G335500 Sobic006G120800--Sobic001G335500 Sobic003G035500 Sobic003G035500 Sobic001G033400--Sobic003G035500 Sobic002G341100 Sobic002G341100 Sobic001G033400--Sobic002G341100 Sobic001G033400--Sobic010G207400 Sobic001G041400 Sobic001G041400 Sobic001G033400--Sobic001G041400 Sobic007G078300 Sobic007G078300 Sobic001G033400--Sobic007G078300 Sobic003G004500 Sobic003G004500 Sobic001G033400--Sobic003G004500 Sobic010G189100 Sobic010G189100 Sobic001G033400--Sobic010G189100 Sobic005G050600 Sobic005G050600 Sobic001G033400--Sobic005G050600 Sobic001G033400--Sobic002G403200
Octagon: transcription factors


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