Gene annotation
Transcriptome id Sobic.007G201800.2,Sobic.007G201800.1
Synonym Sb07g026920
Functional annotation DNA repair ATPase-related, putative, expressed
UniProt A0A1B6PIT4 , A0A1B6PIT8
Pfam -
Panther DB PTHR34360 PTHR34360:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31340 : myosin heavy chain-related
RAP-DB (Rice) LOC_Os08g40790.1 : DNA repair ATPase-related, putative, expressed
MaizeGDB (Corn) Zm00025a030351 , Zm00025a050440 , Zm00025a020568 , Zm00025a005165 , Zm00025a044953
Brachypodium KQJ90843 , KQJ90846 , KQJ90845 , KQJ90844 , KQJ99017 , KQJ99016 , KQJ99015 , KQJ99014 , KQJ99013
Barley HORVU5Hr1G074800.4 , HORVU5Hr1G074800.5 , HORVU5Hr1G074800.6 , HORVU5Hr1G074800.7 , HORVU5Hr1G074800.1 , HORVU5Hr1G074800.2 , HORVU5Hr1G074800.3 , HORVU5Hr1G074800.8 , HORVU5Hr1G074800.9 , HORVU5Hr1G074800.14 , HORVU5Hr1G074800.15 , HORVU5Hr1G074800.12 , HORVU5Hr1G074800.13 , HORVU5Hr1G074800.10 , HORVU5Hr1G074800.11
Wheat TraesCS5B02G275100 , TraesCS5A02G275800 , TraesCS5A02G275800 , TraesCS5B02G275100 , TraesCS5D02G283100 , TraesCS5D02G283100
Populus -


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cDNA sequences
Sobic.007G201800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G128200 Probable LRR receptor-like serine/threonine-protein kinase At5g10290(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
2 Sobic.002G029100 GYF domain containing protein, putative, expressed -
3 Sobic.003G052800 RST1, putative, expressed -
4 Sobic.007G041300 expressed protein -
5 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
6 Sobic.007G183300 expressed protein -
7 Sobic.001G178300 DNA-binding protein, putative, expressed -
8 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
9 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
10 Sobic.010G015900 transcriptional corepressor SEUSS, putative, expressed -
11 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
12 Sobic.001G275300 - K10899: ATP-dependent DNA helicase Q1
13 Sobic.009G046800 TOC159, putative, expressed -
14 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
15 Sobic.002G164200 PFT1, putative, expressed K15168: mediator of RNA polymerase II transcription subunit 25
16 Sobic.001G039500 protein kinase domain containing protein, expressed -
17 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
18 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -
19 Sobic.001G051700 expressed protein -
20 Sobic.004G067400 expressed protein -


Gene co-expression network
sample Sobic007G201800 Sobic007G201800 Sobic004G128200 Sobic004G128200 Sobic007G201800--Sobic004G128200 Sobic002G029100 Sobic002G029100 Sobic007G201800--Sobic002G029100 Sobic003G052800 Sobic003G052800 Sobic007G201800--Sobic003G052800 Sobic007G041300 Sobic007G041300 Sobic007G201800--Sobic007G041300 Sobic005G046900 Sobic005G046900 Sobic007G201800--Sobic005G046900 Sobic007G183300 Sobic007G183300 Sobic007G201800--Sobic007G183300 Sobic001G178300 Sobic001G178300 Sobic007G201800--Sobic001G178300 Sobic005G191700 Sobic005G191700 Sobic007G201800--Sobic005G191700 Sobic009G255600 Sobic009G255600 Sobic007G201800--Sobic009G255600 Sobic005G199200 Sobic005G199200 Sobic004G128200--Sobic005G199200 Sobic001G367100 Sobic001G367100 Sobic004G128200--Sobic001G367100 Sobic010G279900 Sobic010G279900 Sobic004G128200--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic004G128200--Sobic001G315400 Sobic003G409200 Sobic003G409200 Sobic004G128200--Sobic003G409200 Sobic001G090300 Sobic001G090300 Sobic004G128200--Sobic001G090300 Sobic002G145800 Sobic002G145800 Sobic004G128200--Sobic002G145800 Sobic004G128200--Sobic007G183300 Sobic008G017100 Sobic008G017100 Sobic004G128200--Sobic008G017100 Sobic004G311400 Sobic004G311400 Sobic002G029100--Sobic004G311400 Sobic003G214600 Sobic003G214600 Sobic002G029100--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic002G029100--Sobic005G200800 Sobic002G029100--Sobic009G255600 Sobic002G029100--Sobic007G183300 Sobic002G245000 Sobic002G245000 Sobic002G029100--Sobic002G245000 Sobic010G186600 Sobic010G186600 Sobic002G029100--Sobic010G186600 Sobic002G164200 Sobic002G164200 Sobic002G029100--Sobic002G164200 Sobic008G002300 Sobic008G002300 Sobic002G029100--Sobic008G002300 Sobic006G269800 Sobic006G269800 Sobic003G052800--Sobic006G269800 Sobic003G052800--Sobic002G145800 Sobic002G430300 Sobic002G430300 Sobic003G052800--Sobic002G430300 Sobic002G371600 Sobic002G371600 Sobic003G052800--Sobic002G371600 Sobic002G372500 Sobic002G372500 Sobic003G052800--Sobic002G372500 Sobic001G051700 Sobic001G051700 Sobic003G052800--Sobic001G051700 Sobic002G043100 Sobic002G043100 Sobic003G052800--Sobic002G043100 Sobic010G174700 Sobic010G174700 Sobic003G052800--Sobic010G174700 Sobic003G217200 Sobic003G217200 Sobic003G052800--Sobic003G217200 Sobic007G102700 Sobic007G102700 Sobic007G041300--Sobic007G102700 Sobic001G473600 Sobic001G473600 Sobic007G041300--Sobic001G473600 Sobic007G191700 Sobic007G191700 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic003G438900 Sobic003G438900 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic007G041300--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic007G041300--Sobic003G427100 Sobic006G276000 Sobic006G276000 Sobic005G046900--Sobic006G276000 Sobic005G046900--Sobic007G041300 Sobic005G046900--Sobic005G079800 Sobic005G046900--Sobic003G427100 Sobic001G013300 Sobic001G013300 Sobic005G046900--Sobic001G013300 Sobic006G120800 Sobic006G120800 Sobic005G046900--Sobic006G120800 Sobic008G057000 Sobic008G057000 Sobic005G046900--Sobic008G057000 Sobic005G046900--Sobic005G191700 Sobic005G046900--Sobic003G409200 Sobic007G183300--Sobic005G200800 Sobic007G183300--Sobic002G145800 Sobic003G416700 Sobic003G416700 Sobic007G183300--Sobic003G416700 Sobic007G183300--Sobic003G214600 Sobic007G183300--Sobic010G279900 Sobic002G154000 Sobic002G154000 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G168300 Sobic007G168300 Sobic007G183300--Sobic007G168300 Sobic007G183300--Sobic001G051700 Sobic002G256700 Sobic002G256700 Sobic001G178300--Sobic002G256700 Sobic001G178300--Sobic008G002300 Sobic006G250300 Sobic006G250300 Sobic001G178300--Sobic006G250300 Sobic004G131800 Sobic004G131800 Sobic001G178300--Sobic004G131800 Sobic001G493700 Sobic001G493700 Sobic001G178300--Sobic001G493700 Sobic006G088200 Sobic006G088200 Sobic001G178300--Sobic006G088200 Sobic001G275300 Sobic001G275300 Sobic001G178300--Sobic001G275300 Sobic006G056700 Sobic006G056700 Sobic001G178300--Sobic006G056700 Sobic001G537500 Sobic001G537500 Sobic001G178300--Sobic001G537500 Sobic005G191700--Sobic006G269800 Sobic005G191700--Sobic005G046900 Sobic005G191700--Sobic002G145800 Sobic005G191700--Sobic001G013300 Sobic005G191700--Sobic003G409200 Sobic005G191700--Sobic008G057000 Sobic003G062300 Sobic003G062300 Sobic005G191700--Sobic003G062300 Sobic001G373400 Sobic001G373400 Sobic005G191700--Sobic001G373400 Sobic005G191700--Sobic002G029100 Sobic009G255600--Sobic010G186600 Sobic009G255600--Sobic003G416700 Sobic009G255600--Sobic003G214600 Sobic009G255600--Sobic005G200800 Sobic009G119000 Sobic009G119000 Sobic009G255600--Sobic009G119000 Sobic009G255600--Sobic002G029100 Sobic003G042400 Sobic003G042400 Sobic009G255600--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic009G255600--Sobic001G291800 Sobic003G360400 Sobic003G360400 Sobic009G255600--Sobic003G360400
Octagon: transcription factors


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