Gene annotation
Transcriptome id Sobic.010G008700.1
Synonym Sb10g000990
Functional annotation expressed protein
UniProt C5Z2Q4
Pfam PF09991
Panther DB PTHR37185 PTHR37185:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26180 : -
RAP-DB (Rice) LOC_Os02g22060.1 : expressed protein
MaizeGDB (Corn) Zm00025a050279
Brachypodium -
Barley HORVU6Hr1G025780.8 , HORVU6Hr1G025780.9 , HORVU6Hr1G025780.2 , HORVU6Hr1G025780.3 , HORVU6Hr1G025780.1 , HORVU6Hr1G025780.6 , HORVU6Hr1G025780.7 , HORVU6Hr1G025780.4 , HORVU6Hr1G025780.5 , HORVU6Hr1G025780.10 , HORVU6Hr1G025780.11 , HORVU6Hr1G025780.12 , HORVU6Hr1G025780.13 , HORVU6Hr1G025780.14 , HORVU6Hr1G025780.15 , HORVU6Hr1G025780.16
Wheat TraesCS6B02G162600 , TraesCS6D02G123600 , TraesCS6A02G134400
Populus -


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cDNA sequences
Sobic.010G008700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G162900 expressed protein -
2 Sobic.002G200200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
3 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
4 Sobic.008G078400 outer envelope protein, putative, expressed -
5 Sobic.004G255500 SET domain-containing protein, putative, expressed -
6 Sobic.006G112600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
7 Sobic.007G123600 GTPase of unknown function domain containing protein, putative, expressed K03650: mnmE, trmE, tRNA modification GTPase
8 Sobic.001G337600 expressed protein -
9 Sobic.004G328400 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
10 Sobic.001G099000 expressed protein -
11 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
12 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase
13 Sobic.002G304100 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
14 Sobic.002G378000 amidase family protein, putative, expressed -
15 Sobic.001G495300 expressed protein -
16 Sobic.001G277400 expressed protein -
17 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
18 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
19 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
20 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54


Gene co-expression network
sample Sobic010G008700 Sobic010G008700 Sobic003G162900 Sobic003G162900 Sobic010G008700--Sobic003G162900 Sobic002G200200 Sobic002G200200 Sobic010G008700--Sobic002G200200 Sobic001G448600 Sobic001G448600 Sobic010G008700--Sobic001G448600 Sobic008G078400 Sobic008G078400 Sobic010G008700--Sobic008G078400 Sobic004G255500 Sobic004G255500 Sobic010G008700--Sobic004G255500 Sobic006G112600 Sobic006G112600 Sobic010G008700--Sobic006G112600 Sobic007G123600 Sobic007G123600 Sobic010G008700--Sobic007G123600 Sobic001G337600 Sobic001G337600 Sobic010G008700--Sobic001G337600 Sobic004G328400 Sobic004G328400 Sobic010G008700--Sobic004G328400 Sobic003G085000 Sobic003G085000 Sobic003G162900--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic003G162900--Sobic001G291900 Sobic006G256600 Sobic006G256600 Sobic003G162900--Sobic006G256600 Sobic001G368500 Sobic001G368500 Sobic003G162900--Sobic001G368500 Sobic006G106400 Sobic006G106400 Sobic003G162900--Sobic006G106400 Sobic001G122400 Sobic001G122400 Sobic003G162900--Sobic001G122400 Sobic004G065300 Sobic004G065300 Sobic003G162900--Sobic004G065300 Sobic003G271900 Sobic003G271900 Sobic003G162900--Sobic003G271900 Sobic003G432500 Sobic003G432500 Sobic003G162900--Sobic003G432500 Sobic010G095200 Sobic010G095200 Sobic002G200200--Sobic010G095200 Sobic004G298100 Sobic004G298100 Sobic002G200200--Sobic004G298100 Sobic002G200200--Sobic001G122400 Sobic001G240000 Sobic001G240000 Sobic002G200200--Sobic001G240000 Sobic003G256200 Sobic003G256200 Sobic002G200200--Sobic003G256200 Sobic002G158800 Sobic002G158800 Sobic002G200200--Sobic002G158800 Sobic008G039600 Sobic008G039600 Sobic002G200200--Sobic008G039600 Sobic001G333000 Sobic001G333000 Sobic002G200200--Sobic001G333000 Sobic002G200200--Sobic006G106400 Sobic001G375000 Sobic001G375000 Sobic001G448600--Sobic001G375000 Sobic001G448600--Sobic004G255500 Sobic002G140000 Sobic002G140000 Sobic001G448600--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic001G448600--Sobic001G281500 Sobic002G013700 Sobic002G013700 Sobic001G448600--Sobic002G013700 Sobic009G104700 Sobic009G104700 Sobic001G448600--Sobic009G104700 Sobic007G015300 Sobic007G015300 Sobic001G448600--Sobic007G015300 Sobic003G128400 Sobic003G128400 Sobic001G448600--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic001G448600--Sobic010G027200 Sobic008G078400--Sobic010G095200 Sobic001G475600 Sobic001G475600 Sobic008G078400--Sobic001G475600 Sobic006G054300 Sobic006G054300 Sobic008G078400--Sobic006G054300 Sobic003G386300 Sobic003G386300 Sobic008G078400--Sobic003G386300 Sobic008G078400--Sobic002G013700 Sobic009G130800 Sobic009G130800 Sobic008G078400--Sobic009G130800 Sobic007G143700 Sobic007G143700 Sobic008G078400--Sobic007G143700 Sobic003G202300 Sobic003G202300 Sobic008G078400--Sobic003G202300 Sobic007G013400 Sobic007G013400 Sobic008G078400--Sobic007G013400 Sobic001G099000 Sobic001G099000 Sobic004G255500--Sobic001G099000 Sobic004G255500--Sobic001G448600 Sobic005G022800 Sobic005G022800 Sobic004G255500--Sobic005G022800 Sobic004G255500--Sobic001G281500 Sobic004G255500--Sobic002G013700 Sobic004G255500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic004G255500--Sobic005G184300 Sobic004G255500--Sobic002G140000 Sobic004G255500--Sobic007G015300 Sobic005G143500 Sobic005G143500 Sobic006G112600--Sobic005G143500 Sobic001G495200 Sobic001G495200 Sobic006G112600--Sobic001G495200 Sobic008G050400 Sobic008G050400 Sobic006G112600--Sobic008G050400 Sobic002G274200 Sobic002G274200 Sobic006G112600--Sobic002G274200 Sobic003G232700 Sobic003G232700 Sobic006G112600--Sobic003G232700 Sobic006G112600--Sobic008G039600 Sobic001G054100 Sobic001G054100 Sobic006G112600--Sobic001G054100 Sobic002G181000 Sobic002G181000 Sobic006G112600--Sobic002G181000 Sobic002G347600 Sobic002G347600 Sobic006G112600--Sobic002G347600 Sobic003G151500 Sobic003G151500 Sobic007G123600--Sobic003G151500 Sobic006G055800 Sobic006G055800 Sobic007G123600--Sobic006G055800 Sobic002G043600 Sobic002G043600 Sobic007G123600--Sobic002G043600 Sobic004G119500 Sobic004G119500 Sobic007G123600--Sobic004G119500 Sobic007G123600--Sobic002G181000 Sobic007G123600--Sobic002G200200 Sobic007G123600--Sobic003G432500 Sobic001G461700 Sobic001G461700 Sobic007G123600--Sobic001G461700 Sobic004G338300 Sobic004G338300 Sobic007G123600--Sobic004G338300 Sobic001G337600--Sobic001G099000 Sobic001G337600--Sobic004G255500 Sobic009G055800 Sobic009G055800 Sobic001G337600--Sobic009G055800 Sobic005G036100 Sobic005G036100 Sobic001G337600--Sobic005G036100 Sobic001G337600--Sobic001G122400 Sobic006G107600 Sobic006G107600 Sobic001G337600--Sobic006G107600 Sobic001G337600--Sobic003G386300 Sobic001G337600--Sobic003G162900 Sobic003G077400 Sobic003G077400 Sobic001G337600--Sobic003G077400 Sobic003G141100 Sobic003G141100 Sobic004G328400--Sobic003G141100 Sobic004G328400--Sobic003G232700 Sobic003G372900 Sobic003G372900 Sobic004G328400--Sobic003G372900 Sobic001G500600 Sobic001G500600 Sobic004G328400--Sobic001G500600 Sobic004G336200 Sobic004G336200 Sobic004G328400--Sobic004G336200 Sobic004G328400--Sobic001G054100 Sobic003G301300 Sobic003G301300 Sobic004G328400--Sobic003G301300 Sobic003G150800 Sobic003G150800 Sobic004G328400--Sobic003G150800 Sobic003G160800 Sobic003G160800 Sobic004G328400--Sobic003G160800
Octagon: transcription factors


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