Gene annotation
Transcriptome id Sobic.002G302700.1
Synonym Ma2, Maturity2
Functional annotation "flowering, a SET (Suppressor of variegation, Enhancer of Zeste, Trithorax) and MYND (Myeloid-Nervy-DEAF1) (SMYD) domain protein (SMYD proteins act as lysine methyltransferases), Ma2 delayed flowering in long days by selectively enhancing the expression of SbPRR37 (Ma1) and SbCO, epistatic interanciton with Ma4" (PubMedID : 30969968)
zinc finger protein, putative, expressed
UniProt A0A1B6QE73
Pfam PF01753
Panther DB PTHR12197 PTHR12197:SF166
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70150 : zinc ion binding
RAP-DB (Rice) LOC_Os07g29770.2 : zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a048027
Brachypodium KQK16253 , PNT75114 , PNT75116 , PNT75118 , PNT75119 , KQK16247 , PNT75120
Barley -
Wheat TraesCS4A02G341900 , TraesCS5B02G532800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
2 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
3 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
4 Sobic.006G096900 expressed protein -
5 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
6 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
7 Sobic.001G536400 THO complex subunit 1, putative, expressed K12878: THO complex subunit 1
8 Sobic.004G213800 expressed protein -
9 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
10 Sobic.010G226000 expressed protein -
11 Sobic.004G351600 expressed protein K18734: protein SMG8
12 Sobic.001G449400 ariadne-1, putative, expressed K11968: ariadne-1
13 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
14 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.002G429300 importin subunit beta, putative, expressed -
16 Sobic.006G252900 ubiquitin family protein, putative, expressed -
17 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
18 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
19 Sobic.006G216100 expressed protein -
20 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic002G302700 Sobic002G302700 Sobic007G017800 Sobic007G017800 Sobic002G302700--Sobic007G017800 Sobic006G234700 Sobic006G234700 Sobic002G302700--Sobic006G234700 Sobic010G059500 Sobic010G059500 Sobic002G302700--Sobic010G059500 Sobic006G096900 Sobic006G096900 Sobic002G302700--Sobic006G096900 Sobic009G228000 Sobic009G228000 Sobic002G302700--Sobic009G228000 Sobic010G034100 Sobic010G034100 Sobic002G302700--Sobic010G034100 Sobic001G536400 Sobic001G536400 Sobic002G302700--Sobic001G536400 Sobic004G213800 Sobic004G213800 Sobic002G302700--Sobic004G213800 Sobic008G063300 Sobic008G063300 Sobic002G302700--Sobic008G063300 Sobic001G405600 Sobic001G405600 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic003G143200 Sobic003G143200 Sobic007G017800--Sobic003G143200 Sobic004G185800 Sobic004G185800 Sobic007G017800--Sobic004G185800 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic007G017800--Sobic006G234700 Sobic007G017800--Sobic008G063300 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic007G042400 Sobic007G042400 Sobic006G234700--Sobic007G042400 Sobic003G444800 Sobic003G444800 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic010G059500--Sobic004G096400 Sobic010G059500--Sobic006G234700 Sobic001G145400 Sobic001G145400 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic006G077200 Sobic006G077200 Sobic010G059500--Sobic006G077200 Sobic010G059500--Sobic001G493200 Sobic006G096900--Sobic008G063300 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic003G360400 Sobic003G360400 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800 Sobic009G107300 Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic003G043000 Sobic003G043000 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic003G241700 Sobic003G241700 Sobic009G228000--Sobic003G241700 Sobic003G363700 Sobic003G363700 Sobic009G228000--Sobic003G363700 Sobic002G063900 Sobic002G063900 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic004G209700 Sobic004G209700 Sobic009G228000--Sobic004G209700 Sobic009G228000--Sobic006G234700 Sobic010G034100--Sobic010G059500 Sobic010G034100--Sobic001G035200 Sobic010G034100--Sobic009G192300 Sobic010G034100--Sobic001G405600 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic003G093800 Sobic003G093800 Sobic001G536400--Sobic003G093800 Sobic009G165700 Sobic009G165700 Sobic001G536400--Sobic009G165700 Sobic001G441400 Sobic001G441400 Sobic001G536400--Sobic001G441400 Sobic001G451400 Sobic001G451400 Sobic001G536400--Sobic001G451400 Sobic001G536400--Sobic006G252900 Sobic001G363500 Sobic001G363500 Sobic001G536400--Sobic001G363500 Sobic003G422500 Sobic003G422500 Sobic001G536400--Sobic003G422500 Sobic004G065100 Sobic004G065100 Sobic001G536400--Sobic004G065100 Sobic001G289800 Sobic001G289800 Sobic001G536400--Sobic001G289800 Sobic004G213800--Sobic003G241700 Sobic001G151100 Sobic001G151100 Sobic004G213800--Sobic001G151100 Sobic010G244900 Sobic010G244900 Sobic004G213800--Sobic010G244900 Sobic004G213800--Sobic009G228000 Sobic003G296900 Sobic003G296900 Sobic004G213800--Sobic003G296900 Sobic004G213800--Sobic003G043000 Sobic005G167700 Sobic005G167700 Sobic004G213800--Sobic005G167700 Sobic001G275300 Sobic001G275300 Sobic004G213800--Sobic001G275300 Sobic007G000300 Sobic007G000300 Sobic004G213800--Sobic007G000300 Sobic004G140600 Sobic004G140600 Sobic008G063300--Sobic004G140600 Sobic008G063300--Sobic001G433800 Sobic008G063300--Sobic006G096900 Sobic008G063300--Sobic003G360400 Sobic008G063300--Sobic003G095900 Sobic010G123600 Sobic010G123600 Sobic008G063300--Sobic010G123600 Sobic003G188400 Sobic003G188400 Sobic008G063300--Sobic003G188400 Sobic008G063300--Sobic009G177500 Sobic008G063300--Sobic010G059500
Octagon: transcription factors


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