Gene annotation
Transcriptome id Sobic.002G324100.1,Sobic.002G324100.2
Synonym Sb02g035160, XTH8
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt A0A1B6QEN3 , A0A1B6QEM0
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF1
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G11545 : xyloglucan endotransglucosylase/hydrolase 8
RAP-DB (Rice) LOC_Os07g34580.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a032395 , Zm00025a018308 , Zm00025a034970 , Zm00025a003233 , Zm00025a048260 , Zm00025a018310 , Zm00025a056955 , Zm00025a046886 , Zm00025a032745 , Zm00025a009680 , Zm00025a009908
Brachypodium KQK17339 , KQJ84798 , PNT64517 , KQJ97550 , KQK15928 , KQK00866 , KQJ95699 , KQJ90139 , KQJ95697
Barley HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU2Hr1G045330.9 , HORVU2Hr1G045330.8 , HORVU6Hr1G081590.1 , HORVU2Hr1G045330.4 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2 , HORVU6Hr1G081590.5 , HORVU6Hr1G081590.4 , HORVU2Hr1G045330.3 , HORVU7Hr1G081740.1 , HORVU6Hr1G067470.6 , HORVU2Hr1G108420.5 , HORVU6Hr1G067470.4 , HORVU6Hr1G067470.5 , HORVU6Hr1G067470.2 , HORVU6Hr1G067470.3 , HORVU6Hr1G067470.1 , HORVU2Hr1G108420.6 , HORVU5Hr1G060340.6 , HORVU5Hr1G060340.7 , HORVU5Hr1G060340.4 , HORVU5Hr1G060340.5 , HORVU5Hr1G060340.3 , HORVU5Hr1G060340.1 , HORVU7Hr1G098370.2 , HORVU7Hr1G098370.3 , HORVU7Hr1G098370.1 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.3 , HORVU7Hr1G098390.4 , HORVU2Hr1G108420.4 , HORVU2Hr1G045330.5 , HORVU2Hr1G045330.7 , HORVU2Hr1G045330.6 , HORVU7Hr1G098370.4 , HORVU0Hr1G021280.1 , HORVU0Hr1G021280.3 , HORVU0Hr1G021280.2
Wheat TraesCSU02G018400 , TraesCS2B02G244500 , TraesCS2D02G498400 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS2B02G526500 , TraesCS7B02G327400 , TraesCS7A02G363000 , TraesCS2A02G484100 , TraesCS2A02G484100 , TraesCS2B02G454800 , TraesCS6A02G088000 , TraesCS2D02G498500 , TraesCS2D02G498600 , TraesCS2D02G431800 , TraesCS1B02G424500 , TraesCS6B02G293500 , TraesCS7B02G327500 , TraesCS6B02G368300 , TraesCS7D02G419600 , TraesCS7A02G427100 , TraesCS2D02G484000 , TraesCS2D02G224300 , TraesCS7D02G419400 , TraesCS5B02G202000 , TraesCS2D02G484000 , TraesCS7A02G427300 , TraesCS6A02G266100 , TraesCS2D02G498700 , TraesCS7A02G427200 , TraesCS5A02G203300 , TraesCS7A02G331200 , TraesCS5D02G209700 , TraesCS6B02G110400 , TraesCS2B02G510200 , TraesCS2B02G510200
Populus -


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cDNA sequences
Sobic.002G324100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G061500 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
2 Sobic.006G192400 U-box domain-containing protein, putative, expressed -
3 Sobic.003G346200 myosin heavy chain-related, putative, expressed -
4 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
5 Sobic.001G198900 expressed protein -
6 Sobic.001G004000 avr9/Cf-9 rapidly elicited protein, putative, expressed -
7 Sobic.001G531900 cyclin-like F-box, putative, expressed -
8 Sobic.001G396300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein CP12-2 (Os)(PubMedID : 27208977)@calvin cycle protein CP12, putative, expressed -
9 Sobic.003G267900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.005G232000 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
11 Sobic.009G155500 cytochrome P450, putative, expressed -
12 Sobic.010G095500 NHL repeat-containing protein, putative, expressed -
13 Sobic.006G169400 expressed protein -
14 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
15 Sobic.003G230300 expressed protein -
16 Sobic.008G061000 expressed protein -
17 Sobic.002G370100 proline-rich protein, putative, expressed -
18 Sobic.004G236500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
19 Sobic.001G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.007G156101 - -


Gene co-expression network
sample Sobic002G324100 Sobic002G324100 Sobic001G061500 Sobic001G061500 Sobic002G324100--Sobic001G061500 Sobic006G192400 Sobic006G192400 Sobic002G324100--Sobic006G192400 Sobic003G346200 Sobic003G346200 Sobic002G324100--Sobic003G346200 Sobic004G230900 Sobic004G230900 Sobic002G324100--Sobic004G230900 Sobic001G198900 Sobic001G198900 Sobic002G324100--Sobic001G198900 Sobic001G004000 Sobic001G004000 Sobic002G324100--Sobic001G004000 Sobic001G531900 Sobic001G531900 Sobic002G324100--Sobic001G531900 Sobic001G396300 Sobic001G396300 Sobic002G324100--Sobic001G396300 Sobic003G267900 Sobic003G267900 Sobic002G324100--Sobic003G267900 Sobic001G061500--Sobic006G192400 Sobic001G061500--Sobic001G531900 Sobic003G438200 Sobic003G438200 Sobic001G061500--Sobic003G438200 Sobic001G061500--Sobic002G324100 Sobic006G169400 Sobic006G169400 Sobic001G061500--Sobic006G169400 Sobic007G156101 Sobic007G156101 Sobic001G061500--Sobic007G156101 Sobic001G061500--Sobic004G230900 Sobic006G157300 Sobic006G157300 Sobic001G061500--Sobic006G157300 Sobic001G061500--Sobic003G267900 Sobic001G017900 Sobic001G017900 Sobic006G192400--Sobic001G017900 Sobic002G285300 Sobic002G285300 Sobic006G192400--Sobic002G285300 Sobic006G192400--Sobic003G267900 Sobic004G284400 Sobic004G284400 Sobic006G192400--Sobic004G284400 Sobic003G397000 Sobic003G397000 Sobic006G192400--Sobic003G397000 Sobic003G126500 Sobic003G126500 Sobic006G192400--Sobic003G126500 Sobic006G192400--Sobic006G157300 Sobic006G192400--Sobic001G061500 Sobic006G192400--Sobic007G156101 Sobic004G300500 Sobic004G300500 Sobic003G346200--Sobic004G300500 Sobic004G227000 Sobic004G227000 Sobic003G346200--Sobic004G227000 Sobic010G161300 Sobic010G161300 Sobic003G346200--Sobic010G161300 Sobic002G056300 Sobic002G056300 Sobic003G346200--Sobic002G056300 Sobic006G280300 Sobic006G280300 Sobic003G346200--Sobic006G280300 Sobic006G278400 Sobic006G278400 Sobic003G346200--Sobic006G278400 Sobic004G236500 Sobic004G236500 Sobic003G346200--Sobic004G236500 Sobic008G031600 Sobic008G031600 Sobic003G346200--Sobic008G031600 Sobic008G163800 Sobic008G163800 Sobic003G346200--Sobic008G163800 Sobic003G350100 Sobic003G350100 Sobic004G230900--Sobic003G350100 Sobic002G403400 Sobic002G403400 Sobic004G230900--Sobic002G403400 Sobic003G067300 Sobic003G067300 Sobic004G230900--Sobic003G067300 Sobic001G193400 Sobic001G193400 Sobic004G230900--Sobic001G193400 Sobic003G067500 Sobic003G067500 Sobic004G230900--Sobic003G067500 Sobic008G133100 Sobic008G133100 Sobic004G230900--Sobic008G133100 Sobic004G265400 Sobic004G265400 Sobic004G230900--Sobic004G265400 Sobic001G200500 Sobic001G200500 Sobic004G230900--Sobic001G200500 Sobic004G230900--Sobic002G056300 Sobic004G344301 Sobic004G344301 Sobic001G198900--Sobic004G344301 Sobic001G220200 Sobic001G220200 Sobic001G198900--Sobic001G220200 Sobic010G158100 Sobic010G158100 Sobic001G198900--Sobic010G158100 Sobic010G096801 Sobic010G096801 Sobic001G198900--Sobic010G096801 Sobic004G357066 Sobic004G357066 Sobic001G198900--Sobic004G357066 Sobic004G357033 Sobic004G357033 Sobic001G198900--Sobic004G357033 Sobic001G197500 Sobic001G197500 Sobic001G198900--Sobic001G197500 Sobic005G027032 Sobic005G027032 Sobic001G198900--Sobic005G027032 Sobic002G326050 Sobic002G326050 Sobic001G198900--Sobic002G326050 Sobic004G275500 Sobic004G275500 Sobic001G004000--Sobic004G275500 Sobic007G224600 Sobic007G224600 Sobic001G004000--Sobic007G224600 Sobic006G065700 Sobic006G065700 Sobic001G004000--Sobic006G065700 Sobic001G519300 Sobic001G519300 Sobic001G004000--Sobic001G519300 Sobic002G284901 Sobic002G284901 Sobic001G004000--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic001G004000--Sobic002G320900 Sobic001G115800 Sobic001G115800 Sobic001G004000--Sobic001G115800 Sobic003G120400 Sobic003G120400 Sobic001G004000--Sobic003G120400 Sobic009G198400 Sobic009G198400 Sobic001G004000--Sobic009G198400 Sobic010G045300 Sobic010G045300 Sobic001G531900--Sobic010G045300 Sobic006G133650 Sobic006G133650 Sobic001G531900--Sobic006G133650 Sobic005G022600 Sobic005G022600 Sobic001G531900--Sobic005G022600 Sobic002G188100 Sobic002G188100 Sobic001G531900--Sobic002G188100 Sobic009G039400 Sobic009G039400 Sobic001G531900--Sobic009G039400 Sobic003G081400 Sobic003G081400 Sobic001G531900--Sobic003G081400 Sobic006G167200 Sobic006G167200 Sobic001G531900--Sobic006G167200 Sobic004G069600 Sobic004G069600 Sobic001G531900--Sobic004G069600 Sobic010G029200 Sobic010G029200 Sobic001G531900--Sobic010G029200 Sobic004G320300 Sobic004G320300 Sobic001G396300--Sobic004G320300 Sobic001G186925 Sobic001G186925 Sobic001G396300--Sobic001G186925 Sobic001G396300--Sobic006G065700 Sobic001G441800 Sobic001G441800 Sobic001G396300--Sobic001G441800 Sobic002G387100 Sobic002G387100 Sobic001G396300--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G396300--Sobic002G430200 Sobic001G396300--Sobic001G004000 Sobic001G525000 Sobic001G525000 Sobic001G396300--Sobic001G525000 Sobic001G396300--Sobic009G198400 Sobic003G267900--Sobic007G156101 Sobic003G267900--Sobic002G285300 Sobic003G267900--Sobic001G017900 Sobic003G267900--Sobic006G192400 Sobic003G267900--Sobic004G284400 Sobic007G017400 Sobic007G017400 Sobic003G267900--Sobic007G017400 Sobic010G036000 Sobic010G036000 Sobic003G267900--Sobic010G036000 Sobic008G163700 Sobic008G163700 Sobic003G267900--Sobic008G163700 Sobic003G267900--Sobic003G397000
Octagon: transcription factors


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