Gene annotation
Transcriptome id Sobic.002G358100.1
Synonym Sb02g037920
Functional annotation expressed protein
UniProt A0A1B6QF93
Pfam PF03000
Panther DB PTHR32370 PTHR32370:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G49900 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os07g39850.1 : expressed protein
MaizeGDB (Corn) Zm00025a048579
Brachypodium PNT74853 , KQK15469
Barley -
Wheat TraesCS2B02G213700 , TraesCS2D02G194600 , TraesCS2A02G192800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G270900 Expressed in several layers of cells in the chalaza adjacent to the nucellar epidermis(PubMedID : 25081518)@homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
2 Sobic.007G144000 RING-H2 finger protein, putative, expressed -
3 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
4 Sobic.009G070500 uncharacterized protein At4g06744 precursor, putative, expressed -
5 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
6 Sobic.009G185900 expressed protein -
7 Sobic.003G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
9 Sobic.001G540200 PAIR1, putative, expressed -
10 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.006G116000 Glycerophosphoryl diester phosphodiesterase family protein (Os)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
12 Sobic.001G220250 - -
13 Sobic.003G325400 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
14 Sobic.005G034500 receptor kinase, putative, expressed -
15 Sobic.008G072050 - -
16 Sobic.003G100400 TOO MANY MOUTHS precursor, putative, expressed -
17 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
19 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.003G152300 expressed protein -


Gene co-expression network
sample Sobic002G358100 Sobic002G358100 Sobic002G270900 Sobic002G270900 Sobic002G358100--Sobic002G270900 Sobic007G144000 Sobic007G144000 Sobic002G358100--Sobic007G144000 Sobic004G102200 Sobic004G102200 Sobic002G358100--Sobic004G102200 Sobic009G070500 Sobic009G070500 Sobic002G358100--Sobic009G070500 Sobic007G165800 Sobic007G165800 Sobic002G358100--Sobic007G165800 Sobic009G185900 Sobic009G185900 Sobic002G358100--Sobic009G185900 Sobic003G298700 Sobic003G298700 Sobic002G358100--Sobic003G298700 Sobic001G434100 Sobic001G434100 Sobic002G358100--Sobic001G434100 Sobic001G540200 Sobic001G540200 Sobic002G358100--Sobic001G540200 Sobic003G100400 Sobic003G100400 Sobic002G270900--Sobic003G100400 Sobic002G270900--Sobic002G358100 Sobic001G135600 Sobic001G135600 Sobic002G270900--Sobic001G135600 Sobic005G055400 Sobic005G055400 Sobic002G270900--Sobic005G055400 Sobic002G270900--Sobic001G434100 Sobic007G107200 Sobic007G107200 Sobic002G270900--Sobic007G107200 Sobic004G041700 Sobic004G041700 Sobic002G270900--Sobic004G041700 Sobic010G078700 Sobic010G078700 Sobic002G270900--Sobic010G078700 Sobic001G511800 Sobic001G511800 Sobic002G270900--Sobic001G511800 Sobic007G144000--Sobic004G102200 Sobic002G186800 Sobic002G186800 Sobic007G144000--Sobic002G186800 Sobic001G247700 Sobic001G247700 Sobic007G144000--Sobic001G247700 Sobic007G049600 Sobic007G049600 Sobic007G144000--Sobic007G049600 Sobic007G144000--Sobic002G358100 Sobic002G360801 Sobic002G360801 Sobic007G144000--Sobic002G360801 Sobic007G144000--Sobic003G298700 Sobic004G357000 Sobic004G357000 Sobic007G144000--Sobic004G357000 Sobic002G194500 Sobic002G194500 Sobic007G144000--Sobic002G194500 Sobic004G102200--Sobic003G298700 Sobic004G274600 Sobic004G274600 Sobic004G102200--Sobic004G274600 Sobic006G270500 Sobic006G270500 Sobic004G102200--Sobic006G270500 Sobic004G102200--Sobic007G165800 Sobic001G199400 Sobic001G199400 Sobic004G102200--Sobic001G199400 Sobic008G008100 Sobic008G008100 Sobic004G102200--Sobic008G008100 Sobic004G102200--Sobic002G186800 Sobic009G175100 Sobic009G175100 Sobic004G102200--Sobic009G175100 Sobic003G070600 Sobic003G070600 Sobic004G102200--Sobic003G070600 Sobic010G246500 Sobic010G246500 Sobic009G070500--Sobic010G246500 Sobic010G077000 Sobic010G077000 Sobic009G070500--Sobic010G077000 Sobic003G338700 Sobic003G338700 Sobic009G070500--Sobic003G338700 Sobic003G325400 Sobic003G325400 Sobic009G070500--Sobic003G325400 Sobic009G146700 Sobic009G146700 Sobic009G070500--Sobic009G146700 Sobic003G373900 Sobic003G373900 Sobic009G070500--Sobic003G373900 Sobic010G070900 Sobic010G070900 Sobic009G070500--Sobic010G070900 Sobic003G239600 Sobic003G239600 Sobic009G070500--Sobic003G239600 Sobic005G199700 Sobic005G199700 Sobic009G070500--Sobic005G199700 Sobic007G165800--Sobic004G274600 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic007G165800--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700 Sobic002G360500 Sobic002G360500 Sobic009G185900--Sobic002G360500 Sobic009G185900--Sobic007G180200 Sobic008G093600 Sobic008G093600 Sobic009G185900--Sobic008G093600 Sobic004G003700 Sobic004G003700 Sobic009G185900--Sobic004G003700 Sobic001G493900 Sobic001G493900 Sobic009G185900--Sobic001G493900 Sobic003G307200 Sobic003G307200 Sobic009G185900--Sobic003G307200 Sobic001G143400 Sobic001G143400 Sobic009G185900--Sobic001G143400 Sobic008G114900 Sobic008G114900 Sobic009G185900--Sobic008G114900 Sobic010G014500 Sobic010G014500 Sobic009G185900--Sobic010G014500 Sobic003G298700--Sobic004G102200 Sobic003G298700--Sobic004G274600 Sobic004G211700 Sobic004G211700 Sobic003G298700--Sobic004G211700 Sobic010G014700 Sobic010G014700 Sobic003G298700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G298700--Sobic002G363300 Sobic002G312300 Sobic002G312300 Sobic003G298700--Sobic002G312300 Sobic003G298700--Sobic006G270500 Sobic003G298700--Sobic003G027100 Sobic003G298700--Sobic008G008100 Sobic001G434100--Sobic007G165800 Sobic001G434100--Sobic004G274600 Sobic001G434100--Sobic001G286700 Sobic001G434100--Sobic003G027100 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic001G434100--Sobic010G235300 Sobic001G434100--Sobic004G357000 Sobic005G164900 Sobic005G164900 Sobic001G540200--Sobic005G164900 Sobic001G540200--Sobic009G185900 Sobic001G540200--Sobic008G114900 Sobic001G320500 Sobic001G320500 Sobic001G540200--Sobic001G320500 Sobic003G084100 Sobic003G084100 Sobic001G540200--Sobic003G084100 Sobic005G034500 Sobic005G034500 Sobic001G540200--Sobic005G034500 Sobic001G091500 Sobic001G091500 Sobic001G540200--Sobic001G091500 Sobic001G540200--Sobic007G180200 Sobic001G540200--Sobic009G146700
Octagon: transcription factors


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