Gene annotation
Transcriptome id Sobic.002G400101.2,Sobic.002G400101.1
Synonym -
Functional annotation -
UniProt A0A1W0W7K3 , A0A1W0W7K9
Pfam PF00646
Panther DB PTHR35545 PTHR35545:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G49030 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os07g45010.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G165600 aminopeptidase, putative, expressed K01256: aminopeptidase N
2 Sobic.001G146800 expressed protein -
3 Sobic.001G120500 toc64, putative, expressed -
4 Sobic.002G380200 calmodulin-binding transcription activator, putative, expressed -
5 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
6 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
7 Sobic.009G056200 arginyl-tRNA synthetase, putative, expressed K01887: RARS, arginyl-tRNA synthetase
8 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
9 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
10 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
11 Sobic.004G005100 peptidase family C78 domain containing protein, expressed -
12 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
13 Sobic.006G083300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K18995: ATP-dependent RNA helicase DHX29
14 Sobic.004G033600 expressed protein -
15 Sobic.001G105700 GTPase of unknown function domain containing protein, putative, expressed -
16 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
17 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
18 Sobic.003G110000 TBC domain containing protein, expressed -
19 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
20 Sobic.003G310900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7


Gene co-expression network
sample Sobic002G400101 Sobic002G400101 Sobic007G165600 Sobic007G165600 Sobic002G400101--Sobic007G165600 Sobic001G146800 Sobic001G146800 Sobic002G400101--Sobic001G146800 Sobic001G120500 Sobic001G120500 Sobic002G400101--Sobic001G120500 Sobic002G380200 Sobic002G380200 Sobic002G400101--Sobic002G380200 Sobic006G153900 Sobic006G153900 Sobic002G400101--Sobic006G153900 Sobic009G101200 Sobic009G101200 Sobic002G400101--Sobic009G101200 Sobic009G056200 Sobic009G056200 Sobic002G400101--Sobic009G056200 Sobic002G425700 Sobic002G425700 Sobic002G400101--Sobic002G425700 Sobic002G260900 Sobic002G260900 Sobic002G400101--Sobic002G260900 Sobic007G103100 Sobic007G103100 Sobic007G165600--Sobic007G103100 Sobic006G055200 Sobic006G055200 Sobic007G165600--Sobic006G055200 Sobic001G004400 Sobic001G004400 Sobic007G165600--Sobic001G004400 Sobic005G122700 Sobic005G122700 Sobic007G165600--Sobic005G122700 Sobic002G133300 Sobic002G133300 Sobic007G165600--Sobic002G133300 Sobic007G165600--Sobic009G056200 Sobic001G194200 Sobic001G194200 Sobic007G165600--Sobic001G194200 Sobic002G316600 Sobic002G316600 Sobic007G165600--Sobic002G316600 Sobic003G186000 Sobic003G186000 Sobic007G165600--Sobic003G186000 Sobic001G058700 Sobic001G058700 Sobic001G146800--Sobic001G058700 Sobic004G200200 Sobic004G200200 Sobic001G146800--Sobic004G200200 Sobic001G498600 Sobic001G498600 Sobic001G146800--Sobic001G498600 Sobic004G347400 Sobic004G347400 Sobic001G146800--Sobic004G347400 Sobic010G112000 Sobic010G112000 Sobic001G146800--Sobic010G112000 Sobic001G178700 Sobic001G178700 Sobic001G146800--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic001G146800--Sobic004G113400 Sobic006G131500 Sobic006G131500 Sobic001G146800--Sobic006G131500 Sobic007G172400 Sobic007G172400 Sobic001G146800--Sobic007G172400 Sobic010G265300 Sobic010G265300 Sobic001G120500--Sobic010G265300 Sobic005G172500 Sobic005G172500 Sobic001G120500--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic001G120500--Sobic001G244300 Sobic001G493200 Sobic001G493200 Sobic001G120500--Sobic001G493200 Sobic006G217000 Sobic006G217000 Sobic001G120500--Sobic006G217000 Sobic001G120500--Sobic007G103100 Sobic008G051200 Sobic008G051200 Sobic001G120500--Sobic008G051200 Sobic001G120500--Sobic009G056200 Sobic009G193500 Sobic009G193500 Sobic001G120500--Sobic009G193500 Sobic001G261501 Sobic001G261501 Sobic002G380200--Sobic001G261501 Sobic003G408600 Sobic003G408600 Sobic002G380200--Sobic003G408600 Sobic009G109200 Sobic009G109200 Sobic002G380200--Sobic009G109200 Sobic005G008800 Sobic005G008800 Sobic002G380200--Sobic005G008800 Sobic003G214600 Sobic003G214600 Sobic002G380200--Sobic003G214600 Sobic002G380200--Sobic001G498600 Sobic002G380200--Sobic001G146800 Sobic007G163100 Sobic007G163100 Sobic002G380200--Sobic007G163100 Sobic010G112100 Sobic010G112100 Sobic002G380200--Sobic010G112100 Sobic006G153900--Sobic001G498600 Sobic007G065100 Sobic007G065100 Sobic006G153900--Sobic007G065100 Sobic006G153900--Sobic002G425700 Sobic006G153900--Sobic001G178700 Sobic006G153900--Sobic010G112000 Sobic006G153900--Sobic006G131500 Sobic001G291000 Sobic001G291000 Sobic006G153900--Sobic001G291000 Sobic010G000600 Sobic010G000600 Sobic006G153900--Sobic010G000600 Sobic001G384900 Sobic001G384900 Sobic006G153900--Sobic001G384900 Sobic006G086600 Sobic006G086600 Sobic009G101200--Sobic006G086600 Sobic010G003400 Sobic010G003400 Sobic009G101200--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic009G101200--Sobic001G145400 Sobic001G259000 Sobic001G259000 Sobic009G101200--Sobic001G259000 Sobic004G085000 Sobic004G085000 Sobic009G101200--Sobic004G085000 Sobic001G052400 Sobic001G052400 Sobic009G101200--Sobic001G052400 Sobic009G246500 Sobic009G246500 Sobic009G101200--Sobic009G246500 Sobic001G429600 Sobic001G429600 Sobic009G101200--Sobic001G429600 Sobic006G049600 Sobic006G049600 Sobic009G101200--Sobic006G049600 Sobic009G056200--Sobic005G172500 Sobic009G056200--Sobic001G194200 Sobic001G227400 Sobic001G227400 Sobic009G056200--Sobic001G227400 Sobic009G056200--Sobic006G055200 Sobic003G195000 Sobic003G195000 Sobic009G056200--Sobic003G195000 Sobic007G207200 Sobic007G207200 Sobic009G056200--Sobic007G207200 Sobic008G063300 Sobic008G063300 Sobic009G056200--Sobic008G063300 Sobic002G142900 Sobic002G142900 Sobic009G056200--Sobic002G142900 Sobic006G055300 Sobic006G055300 Sobic009G056200--Sobic006G055300 Sobic002G425700--Sobic007G065100 Sobic002G425700--Sobic006G153900 Sobic002G276100 Sobic002G276100 Sobic002G425700--Sobic002G276100 Sobic002G425700--Sobic007G165600 Sobic010G143800 Sobic010G143800 Sobic002G425700--Sobic010G143800 Sobic002G425700--Sobic001G261501 Sobic002G425700--Sobic001G498600 Sobic002G425700--Sobic005G122700 Sobic001G090500 Sobic001G090500 Sobic002G425700--Sobic001G090500 Sobic008G083000 Sobic008G083000 Sobic002G260900--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic002G260900--Sobic003G266001 Sobic002G260900--Sobic001G493200 Sobic002G260900--Sobic004G113400 Sobic004G021200 Sobic004G021200 Sobic002G260900--Sobic004G021200 Sobic008G103200 Sobic008G103200 Sobic002G260900--Sobic008G103200 Sobic010G004100 Sobic010G004100 Sobic002G260900--Sobic010G004100 Sobic003G394300 Sobic003G394300 Sobic002G260900--Sobic003G394300 Sobic006G237400 Sobic006G237400 Sobic002G260900--Sobic006G237400
Octagon: transcription factors


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