Gene annotation
Transcriptome id Sobic.002G402366.1
Synonym -
Functional annotation -
UniProt C5X437
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
2 Sobic.009G002700 serpin domain containing protein, putative, expressed K13963: serpin B
3 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
4 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.001G532000 OsFBX76 - F-box domain containing protein, expressed -
6 Sobic.004G082500 OsFBA1 - F-box and FBA domain containing protein, expressed -
7 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
8 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
9 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.002G115801 - -
11 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
12 Sobic.007G037100 MYB family transcription factor, putative, expressed -
13 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
14 Sobic.001G333200 RING zinc finger protein-like, putative, expressed -
15 Sobic.007G094801 - -
16 Sobic.008G161401 - -
17 Sobic.005G028400 "Ca ATPase, IIB type"(PubMedID : 22196357)@Autoihibited Ca2+ - ATPase 11(PubMedID : 26320239)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
18 Sobic.010G124001 - -
19 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
20 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -


Gene co-expression network
sample Sobic002G402366 Sobic002G402366 Sobic001G222300 Sobic001G222300 Sobic002G402366--Sobic001G222300 Sobic009G002700 Sobic009G002700 Sobic002G402366--Sobic009G002700 Sobic009G156000 Sobic009G156000 Sobic002G402366--Sobic009G156000 Sobic007G211000 Sobic007G211000 Sobic002G402366--Sobic007G211000 Sobic001G532000 Sobic001G532000 Sobic002G402366--Sobic001G532000 Sobic004G082500 Sobic004G082500 Sobic002G402366--Sobic004G082500 Sobic002G165300 Sobic002G165300 Sobic002G402366--Sobic002G165300 Sobic003G044900 Sobic003G044900 Sobic002G402366--Sobic003G044900 Sobic002G285200 Sobic002G285200 Sobic002G402366--Sobic002G285200 Sobic007G037100 Sobic007G037100 Sobic001G222300--Sobic007G037100 Sobic005G162600 Sobic005G162600 Sobic001G222300--Sobic005G162600 Sobic008G101800 Sobic008G101800 Sobic001G222300--Sobic008G101800 Sobic001G222300--Sobic007G211000 Sobic004G188300 Sobic004G188300 Sobic001G222300--Sobic004G188300 Sobic002G001600 Sobic002G001600 Sobic001G222300--Sobic002G001600 Sobic001G451000 Sobic001G451000 Sobic001G222300--Sobic001G451000 Sobic008G116500 Sobic008G116500 Sobic001G222300--Sobic008G116500 Sobic002G284200 Sobic002G284200 Sobic001G222300--Sobic002G284200 Sobic009G002700--Sobic009G156000 Sobic005G028400 Sobic005G028400 Sobic009G002700--Sobic005G028400 Sobic003G324000 Sobic003G324000 Sobic009G002700--Sobic003G324000 Sobic008G161401 Sobic008G161401 Sobic009G002700--Sobic008G161401 Sobic005G187200 Sobic005G187200 Sobic009G002700--Sobic005G187200 Sobic003G093600 Sobic003G093600 Sobic009G002700--Sobic003G093600 Sobic001G479500 Sobic001G479500 Sobic009G002700--Sobic001G479500 Sobic003G258400 Sobic003G258400 Sobic009G002700--Sobic003G258400 Sobic005G130200 Sobic005G130200 Sobic009G002700--Sobic005G130200 Sobic002G283300 Sobic002G283300 Sobic009G156000--Sobic002G283300 Sobic009G156000--Sobic005G028400 Sobic009G156000--Sobic003G093600 Sobic009G156000--Sobic008G161401 Sobic009G156000--Sobic005G130200 Sobic009G156000--Sobic002G165300 Sobic009G156000--Sobic001G479500 Sobic010G248200 Sobic010G248200 Sobic009G156000--Sobic010G248200 Sobic004G143700 Sobic004G143700 Sobic009G156000--Sobic004G143700 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic001G532000--Sobic007G211000 Sobic006G082600 Sobic006G082600 Sobic001G532000--Sobic006G082600 Sobic006G173000 Sobic006G173000 Sobic001G532000--Sobic006G173000 Sobic001G532000--Sobic010G124001 Sobic001G532000--Sobic007G037100 Sobic007G145200 Sobic007G145200 Sobic001G532000--Sobic007G145200 Sobic001G532000--Sobic001G222300 Sobic004G208400 Sobic004G208400 Sobic001G532000--Sobic004G208400 Sobic001G532000--Sobic001G024200 Sobic002G313300 Sobic002G313300 Sobic004G082500--Sobic002G313300 Sobic006G124900 Sobic006G124900 Sobic004G082500--Sobic006G124900 Sobic005G177800 Sobic005G177800 Sobic004G082500--Sobic005G177800 Sobic001G192900 Sobic001G192900 Sobic004G082500--Sobic001G192900 Sobic004G082500--Sobic002G001600 Sobic004G082500--Sobic005G130200 Sobic001G543900 Sobic001G543900 Sobic004G082500--Sobic001G543900 Sobic004G196700 Sobic004G196700 Sobic004G082500--Sobic004G196700 Sobic007G078000 Sobic007G078000 Sobic004G082500--Sobic007G078000 Sobic002G165300--Sobic009G156000 Sobic002G165300--Sobic004G196700 Sobic005G149500 Sobic005G149500 Sobic002G165300--Sobic005G149500 Sobic002G165300--Sobic007G211000 Sobic010G199600 Sobic010G199600 Sobic002G165300--Sobic010G199600 Sobic002G165300--Sobic007G078000 Sobic002G165300--Sobic002G284200 Sobic010G026400 Sobic010G026400 Sobic002G165300--Sobic010G026400 Sobic002G165300--Sobic007G037100 Sobic002G221900 Sobic002G221900 Sobic003G044900--Sobic002G221900 Sobic003G044900--Sobic004G212800 Sobic003G044900--Sobic004G143700 Sobic003G044900--Sobic001G024200 Sobic007G073400 Sobic007G073400 Sobic003G044900--Sobic007G073400 Sobic002G221700 Sobic002G221700 Sobic003G044900--Sobic002G221700 Sobic003G015000 Sobic003G015000 Sobic003G044900--Sobic003G015000 Sobic002G039500 Sobic002G039500 Sobic003G044900--Sobic002G039500 Sobic009G214600 Sobic009G214600 Sobic003G044900--Sobic009G214600 Sobic004G076732 Sobic004G076732 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic002G285200--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic002G285200--Sobic003G424100
Octagon: transcription factors


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