Gene annotation
Transcriptome id Sobic.002G428400.1
Synonym Sb02g043850
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
membrane associated DUF588 domain containing protein, putative, expressed
UniProt A0A1B6QGH9
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38480 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os07g49200.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049249
Brachypodium -
Barley HORVU2Hr1G014740.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
2 Sobic.002G348500 expressed protein -
3 Sobic.001G108800 expressed protein -
4 Sobic.009G179950 - -
5 Sobic.001G009500 - -
6 Sobic.001G328800 expressed protein -
7 Sobic.003G343900 expressed protein -
8 Sobic.001G420600 - -
9 Sobic.004G241100 NHL repeat-containing protein, putative, expressed -
10 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.002G424800 tyrosine protein kinase domain containing protein, putative, expressed -
12 Sobic.009G153100 zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
13 Sobic.003G414800 DUF567 domain containing protein, putative, expressed -
14 Sobic.001G006101 - -
15 Sobic.002G354100 transporter family protein, putative, expressed -
16 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.003G402300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@P21-Rho-binding domain containing protein, putative, expressed -
18 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
20 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -


Gene co-expression network
sample Sobic002G428400 Sobic002G428400 Sobic006G097000 Sobic006G097000 Sobic002G428400--Sobic006G097000 Sobic002G348500 Sobic002G348500 Sobic002G428400--Sobic002G348500 Sobic001G108800 Sobic001G108800 Sobic002G428400--Sobic001G108800 Sobic009G179950 Sobic009G179950 Sobic002G428400--Sobic009G179950 Sobic001G009500 Sobic001G009500 Sobic002G428400--Sobic001G009500 Sobic001G328800 Sobic001G328800 Sobic002G428400--Sobic001G328800 Sobic003G343900 Sobic003G343900 Sobic002G428400--Sobic003G343900 Sobic001G420600 Sobic001G420600 Sobic002G428400--Sobic001G420600 Sobic004G241100 Sobic004G241100 Sobic002G428400--Sobic004G241100 Sobic006G097000--Sobic002G348500 Sobic006G096600 Sobic006G096600 Sobic006G097000--Sobic006G096600 Sobic006G097000--Sobic001G108800 Sobic001G428600 Sobic001G428600 Sobic006G097000--Sobic001G428600 Sobic004G310200 Sobic004G310200 Sobic006G097000--Sobic004G310200 Sobic003G084400 Sobic003G084400 Sobic006G097000--Sobic003G084400 Sobic006G199800 Sobic006G199800 Sobic006G097000--Sobic006G199800 Sobic001G128500 Sobic001G128500 Sobic006G097000--Sobic001G128500 Sobic001G304100 Sobic001G304100 Sobic006G097000--Sobic001G304100 Sobic002G348500--Sobic006G097000 Sobic009G065500 Sobic009G065500 Sobic002G348500--Sobic009G065500 Sobic001G100600 Sobic001G100600 Sobic002G348500--Sobic001G100600 Sobic002G354100 Sobic002G354100 Sobic002G348500--Sobic002G354100 Sobic004G229800 Sobic004G229800 Sobic002G348500--Sobic004G229800 Sobic003G322900 Sobic003G322900 Sobic002G348500--Sobic003G322900 Sobic006G132900 Sobic006G132900 Sobic002G348500--Sobic006G132900 Sobic001G435000 Sobic001G435000 Sobic002G348500--Sobic001G435000 Sobic010G259500 Sobic010G259500 Sobic002G348500--Sobic010G259500 Sobic001G500000 Sobic001G500000 Sobic001G108800--Sobic001G500000 Sobic001G108800--Sobic004G310200 Sobic003G192100 Sobic003G192100 Sobic001G108800--Sobic003G192100 Sobic009G074100 Sobic009G074100 Sobic001G108800--Sobic009G074100 Sobic001G231700 Sobic001G231700 Sobic001G108800--Sobic001G231700 Sobic001G108800--Sobic003G084400 Sobic005G093000 Sobic005G093000 Sobic001G108800--Sobic005G093000 Sobic001G192600 Sobic001G192600 Sobic001G108800--Sobic001G192600 Sobic004G340900 Sobic004G340900 Sobic001G108800--Sobic004G340900 Sobic009G179950--Sobic001G009500 Sobic001G389000 Sobic001G389000 Sobic009G179950--Sobic001G389000 Sobic009G179900 Sobic009G179900 Sobic009G179950--Sobic009G179900 Sobic009G179950--Sobic003G343900 Sobic008G106700 Sobic008G106700 Sobic009G179950--Sobic008G106700 Sobic009G183400 Sobic009G183400 Sobic009G179950--Sobic009G183400 Sobic004G061200 Sobic004G061200 Sobic009G179950--Sobic004G061200 Sobic001G097600 Sobic001G097600 Sobic009G179950--Sobic001G097600 Sobic009G179950--Sobic005G093000 Sobic001G247600 Sobic001G247600 Sobic001G009500--Sobic001G247600 Sobic001G009500--Sobic008G106700 Sobic001G009500--Sobic003G343900 Sobic001G009500--Sobic001G389000 Sobic001G009500--Sobic009G074100 Sobic001G119400 Sobic001G119400 Sobic001G009500--Sobic001G119400 Sobic004G100700 Sobic004G100700 Sobic001G009500--Sobic004G100700 Sobic004G075000 Sobic004G075000 Sobic001G009500--Sobic004G075000 Sobic008G186100 Sobic008G186100 Sobic001G009500--Sobic008G186100 Sobic006G157900 Sobic006G157900 Sobic001G328800--Sobic006G157900 Sobic010G270500 Sobic010G270500 Sobic001G328800--Sobic010G270500 Sobic006G260200 Sobic006G260200 Sobic001G328800--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic001G328800--Sobic003G311800 Sobic004G262200 Sobic004G262200 Sobic001G328800--Sobic004G262200 Sobic003G007600 Sobic003G007600 Sobic001G328800--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic001G328800--Sobic003G299300 Sobic006G235200 Sobic006G235200 Sobic001G328800--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic001G328800--Sobic010G270700 Sobic001G494000 Sobic001G494000 Sobic003G343900--Sobic001G494000 Sobic003G343900--Sobic001G009500 Sobic010G252500 Sobic010G252500 Sobic003G343900--Sobic010G252500 Sobic003G343900--Sobic001G389000 Sobic003G343900--Sobic008G106700 Sobic003G343900--Sobic009G179900 Sobic003G343900--Sobic005G093000 Sobic003G429000 Sobic003G429000 Sobic003G343900--Sobic003G429000 Sobic003G417350 Sobic003G417350 Sobic003G343900--Sobic003G417350 Sobic010G102100 Sobic010G102100 Sobic001G420600--Sobic010G102100 Sobic001G037600 Sobic001G037600 Sobic001G420600--Sobic001G037600 Sobic001G420600--Sobic002G348500 Sobic002G230201 Sobic002G230201 Sobic001G420600--Sobic002G230201 Sobic004G156000 Sobic004G156000 Sobic001G420600--Sobic004G156000 Sobic004G105001 Sobic004G105001 Sobic001G420600--Sobic004G105001 Sobic004G280000 Sobic004G280000 Sobic001G420600--Sobic004G280000 Sobic005G033900 Sobic005G033900 Sobic001G420600--Sobic005G033900 Sobic001G420600--Sobic004G241100 Sobic004G169200 Sobic004G169200 Sobic004G241100--Sobic004G169200 Sobic003G428700 Sobic003G428700 Sobic004G241100--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G241100--Sobic006G263600 Sobic009G036000 Sobic009G036000 Sobic004G241100--Sobic009G036000 Sobic001G035100 Sobic001G035100 Sobic004G241100--Sobic001G035100 Sobic001G259600 Sobic001G259600 Sobic004G241100--Sobic001G259600 Sobic003G364600 Sobic003G364600 Sobic004G241100--Sobic003G364600 Sobic003G339500 Sobic003G339500 Sobic004G241100--Sobic003G339500 Sobic010G209200 Sobic010G209200 Sobic004G241100--Sobic010G209200
Octagon: transcription factors


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