Gene annotation
Transcriptome id Sobic.003G014600.1
Synonym Sb03g001450
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
L-ascorbate oxidase precursor, putative, expressed
UniProt C5XKD8
Pfam PF07732 PF00394 PF07731
Panther DB PTHR11709 PTHR11709:SF91
NCBI CDD KOG1263; Multicopper oxidases
KEGG Orthology -
Gene Ontology GO:0005507; copper ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G39830 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os09g32952.1 : L-ascorbate oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046704 , Zm00025a046705
Brachypodium KQJ90009 , KQJ90932 , KQK17923 , KQK17921
Barley HORVU7Hr1G087240.2 , HORVU7Hr1G087240.3 , HORVU5Hr1G076510.4 , HORVU5Hr1G076510.1 , HORVU5Hr1G076510.2 , HORVU5Hr1G076510.3 , HORVU5Hr1G076500.2 , HORVU5Hr1G076500.1 , HORVU7Hr1G087240.1 , HORVU7Hr1G087260.1 , HORVU7Hr1G087260.2 , HORVU5Hr1G076430.3 , HORVU5Hr1G076430.2 , HORVU5Hr1G076430.1
Wheat TraesCS5A02G191200 , TraesCS7D02G361300 , TraesCS5B02G286200 , TraesCS5B02G286300 , TraesCS7A02G361600 , TraesCS5A02G286900 , TraesCS5A02G287000 , TraesCS5D02G294600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351300 expressed protein -
2 Sobic.010G221300 expressed protein -
3 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
4 Sobic.004G316350 - -
5 Sobic.002G176100 membrane protein, putative, expressed -
6 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
7 Sobic.008G009400 - -
8 Sobic.010G082600 EF hand family protein, putative, expressed -
9 Sobic.003G299300 expressed protein -
10 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
11 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
12 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
13 Sobic.006G234466 - -
14 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.003G319500 receptor protein kinase, putative, expressed -
16 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
18 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
19 Sobic.009G171500 expressed protein -
20 Sobic.002G387900 expressed protein -


Gene co-expression network
sample Sobic003G014600 Sobic003G014600 Sobic002G351300 Sobic002G351300 Sobic003G014600--Sobic002G351300 Sobic010G221300 Sobic010G221300 Sobic003G014600--Sobic010G221300 Sobic004G141100 Sobic004G141100 Sobic003G014600--Sobic004G141100 Sobic004G316350 Sobic004G316350 Sobic003G014600--Sobic004G316350 Sobic002G176100 Sobic002G176100 Sobic003G014600--Sobic002G176100 Sobic001G031700 Sobic001G031700 Sobic003G014600--Sobic001G031700 Sobic008G009400 Sobic008G009400 Sobic003G014600--Sobic008G009400 Sobic010G082600 Sobic010G082600 Sobic003G014600--Sobic010G082600 Sobic003G299300 Sobic003G299300 Sobic003G014600--Sobic003G299300 Sobic002G351300--Sobic004G141100 Sobic002G351300--Sobic008G009400 Sobic007G017500 Sobic007G017500 Sobic002G351300--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic002G351300--Sobic006G075400 Sobic002G351300--Sobic003G299300 Sobic009G205500 Sobic009G205500 Sobic002G351300--Sobic009G205500 Sobic006G235100 Sobic006G235100 Sobic002G351300--Sobic006G235100 Sobic004G041900 Sobic004G041900 Sobic002G351300--Sobic004G041900 Sobic004G294400 Sobic004G294400 Sobic002G351300--Sobic004G294400 Sobic006G191800 Sobic006G191800 Sobic010G221300--Sobic006G191800 Sobic010G221300--Sobic004G041900 Sobic010G221300--Sobic001G031700 Sobic010G047100 Sobic010G047100 Sobic010G221300--Sobic010G047100 Sobic003G160700 Sobic003G160700 Sobic010G221300--Sobic003G160700 Sobic003G125650 Sobic003G125650 Sobic010G221300--Sobic003G125650 Sobic004G203700 Sobic004G203700 Sobic010G221300--Sobic004G203700 Sobic009G184000 Sobic009G184000 Sobic010G221300--Sobic009G184000 Sobic002G387900 Sobic002G387900 Sobic010G221300--Sobic002G387900 Sobic004G141100--Sobic002G351300 Sobic004G141100--Sobic006G235100 Sobic004G141100--Sobic010G082600 Sobic004G141100--Sobic007G017500 Sobic004G141100--Sobic006G075400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic006G008000 Sobic006G008000 Sobic004G141100--Sobic006G008000 Sobic008G066401 Sobic008G066401 Sobic004G141100--Sobic008G066401 Sobic004G316350--Sobic004G141100 Sobic004G316350--Sobic002G176100 Sobic004G316350--Sobic002G351300 Sobic004G316350--Sobic006G054800 Sobic001G242000 Sobic001G242000 Sobic004G316350--Sobic001G242000 Sobic003G043500 Sobic003G043500 Sobic004G316350--Sobic003G043500 Sobic004G316350--Sobic008G009400 Sobic010G270700 Sobic010G270700 Sobic004G316350--Sobic010G270700 Sobic009G145600 Sobic009G145600 Sobic004G316350--Sobic009G145600 Sobic003G319500 Sobic003G319500 Sobic002G176100--Sobic003G319500 Sobic009G111000 Sobic009G111000 Sobic002G176100--Sobic009G111000 Sobic002G176100--Sobic004G141100 Sobic010G008400 Sobic010G008400 Sobic002G176100--Sobic010G008400 Sobic003G417200 Sobic003G417200 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic002G176100--Sobic008G009400 Sobic001G304100 Sobic001G304100 Sobic002G176100--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G176100--Sobic009G188000 Sobic001G031700--Sobic004G041900 Sobic001G031700--Sobic007G017500 Sobic001G031700--Sobic006G075400 Sobic001G295200 Sobic001G295200 Sobic001G031700--Sobic001G295200 Sobic007G058400 Sobic007G058400 Sobic001G031700--Sobic007G058400 Sobic003G432700 Sobic003G432700 Sobic001G031700--Sobic003G432700 Sobic001G031700--Sobic010G221300 Sobic001G031700--Sobic004G294400 Sobic001G313600 Sobic001G313600 Sobic001G031700--Sobic001G313600 Sobic004G297900 Sobic004G297900 Sobic008G009400--Sobic004G297900 Sobic004G295100 Sobic004G295100 Sobic008G009400--Sobic004G295100 Sobic008G009400--Sobic002G351300 Sobic008G009400--Sobic003G299300 Sobic008G009400--Sobic010G270700 Sobic008G009400--Sobic004G141100 Sobic008G009400--Sobic009G188000 Sobic006G235200 Sobic006G235200 Sobic008G009400--Sobic006G235200 Sobic001G330300 Sobic001G330300 Sobic008G009400--Sobic001G330300 Sobic010G082600--Sobic004G141100 Sobic010G082600--Sobic006G008000 Sobic010G082600--Sobic006G235100 Sobic010G082600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic010G082600--Sobic009G145700 Sobic003G426600 Sobic003G426600 Sobic010G082600--Sobic003G426600 Sobic002G189100 Sobic002G189100 Sobic010G082600--Sobic002G189100 Sobic002G012500 Sobic002G012500 Sobic010G082600--Sobic002G012500 Sobic003G043600 Sobic003G043600 Sobic010G082600--Sobic003G043600 Sobic003G007600 Sobic003G007600 Sobic003G299300--Sobic003G007600 Sobic003G299300--Sobic008G009400 Sobic003G299300--Sobic001G330300 Sobic010G270500 Sobic010G270500 Sobic003G299300--Sobic010G270500 Sobic003G299300--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic003G299300--Sobic001G238400 Sobic003G299300--Sobic001G304100 Sobic003G299300--Sobic004G295100 Sobic006G103000 Sobic006G103000 Sobic003G299300--Sobic006G103000
Octagon: transcription factors


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