Gene annotation
Transcriptome id Sobic.003G074801.1
Synonym -
Functional annotation -
UniProt A0A1W0VW48
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G245400 - -
2 Sobic.008G100600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
3 Sobic.004G082800 GRAM and C2 domains containing protein, putative, expressed -
4 Sobic.010G024400 expressed protein -
5 Sobic.010G146000 CSLD5 - cellulose synthase-like family D, expressed -
6 Sobic.007G154400 emp24/gp25L/p24 family protein, putative, expressed -
7 Sobic.010G202200 - -
8 Sobic.008G036600 expressed protein -
9 Sobic.004G011900 - -
10 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
11 Sobic.001G024400 pectinesterase inhibitor domain containing protein, expressed -
12 Sobic.001G519600 - -
13 Sobic.001G457500 - -
14 Sobic.006G117700 - -
15 Sobic.003G356800 universal stress protein domain containing protein, putative, expressed -
16 Sobic.005G110424 - -
17 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
18 Sobic.007G112832 - -
19 Sobic.007G209900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
20 Sobic.003G303200 ATROPGEF7/ROPGEF7, putative, expressed -


Gene co-expression network
sample Sobic003G074801 Sobic003G074801 Sobic001G245400 Sobic001G245400 Sobic003G074801--Sobic001G245400 Sobic008G100600 Sobic008G100600 Sobic003G074801--Sobic008G100600 Sobic004G082800 Sobic004G082800 Sobic003G074801--Sobic004G082800 Sobic010G024400 Sobic010G024400 Sobic003G074801--Sobic010G024400 Sobic010G146000 Sobic010G146000 Sobic003G074801--Sobic010G146000 Sobic007G154400 Sobic007G154400 Sobic003G074801--Sobic007G154400 Sobic010G202200 Sobic010G202200 Sobic003G074801--Sobic010G202200 Sobic008G036600 Sobic008G036600 Sobic003G074801--Sobic008G036600 Sobic004G011900 Sobic004G011900 Sobic003G074801--Sobic004G011900 Sobic001G245400--Sobic010G024400 Sobic003G353700 Sobic003G353700 Sobic001G245400--Sobic003G353700 Sobic001G245400--Sobic004G082800 Sobic001G245400--Sobic008G036600 Sobic005G169500 Sobic005G169500 Sobic001G245400--Sobic005G169500 Sobic001G245400--Sobic010G202200 Sobic001G024400 Sobic001G024400 Sobic001G245400--Sobic001G024400 Sobic003G236000 Sobic003G236000 Sobic001G245400--Sobic003G236000 Sobic006G117700 Sobic006G117700 Sobic001G245400--Sobic006G117700 Sobic005G110424 Sobic005G110424 Sobic008G100600--Sobic005G110424 Sobic008G100600--Sobic010G202200 Sobic008G100600--Sobic010G146000 Sobic008G100600--Sobic001G024400 Sobic001G405100 Sobic001G405100 Sobic008G100600--Sobic001G405100 Sobic003G156900 Sobic003G156900 Sobic008G100600--Sobic003G156900 Sobic008G100600--Sobic010G024400 Sobic004G025900 Sobic004G025900 Sobic008G100600--Sobic004G025900 Sobic008G017850 Sobic008G017850 Sobic008G100600--Sobic008G017850 Sobic004G082800--Sobic006G117700 Sobic004G082800--Sobic010G024400 Sobic004G082800--Sobic010G202200 Sobic010G130601 Sobic010G130601 Sobic004G082800--Sobic010G130601 Sobic004G082800--Sobic005G110424 Sobic009G230800 Sobic009G230800 Sobic004G082800--Sobic009G230800 Sobic004G082800--Sobic001G024400 Sobic004G064200 Sobic004G064200 Sobic004G082800--Sobic004G064200 Sobic001G519600 Sobic001G519600 Sobic004G082800--Sobic001G519600 Sobic010G024400--Sobic010G202200 Sobic010G024400--Sobic009G230800 Sobic010G024400--Sobic003G236000 Sobic010G024400--Sobic004G064200 Sobic010G024400--Sobic001G519600 Sobic006G269101 Sobic006G269101 Sobic010G024400--Sobic006G269101 Sobic008G148600 Sobic008G148600 Sobic010G024400--Sobic008G148600 Sobic005G225500 Sobic005G225500 Sobic010G024400--Sobic005G225500 Sobic010G024400--Sobic001G024400 Sobic010G146000--Sobic004G011900 Sobic010G146000--Sobic008G100600 Sobic008G100300 Sobic008G100300 Sobic010G146000--Sobic008G100300 Sobic003G213000 Sobic003G213000 Sobic010G146000--Sobic003G213000 Sobic010G146000--Sobic001G405100 Sobic010G146000--Sobic005G110424 Sobic010G146000--Sobic004G082800 Sobic010G146000--Sobic010G202200 Sobic010G146000--Sobic008G036600 Sobic004G075250 Sobic004G075250 Sobic007G154400--Sobic004G075250 Sobic002G223650 Sobic002G223650 Sobic007G154400--Sobic002G223650 Sobic003G274100 Sobic003G274100 Sobic007G154400--Sobic003G274100 Sobic001G467400 Sobic001G467400 Sobic007G154400--Sobic001G467400 Sobic010G157900 Sobic010G157900 Sobic007G154400--Sobic010G157900 Sobic004G168150 Sobic004G168150 Sobic007G154400--Sobic004G168150 Sobic006G276801 Sobic006G276801 Sobic007G154400--Sobic006G276801 Sobic003G250160 Sobic003G250160 Sobic007G154400--Sobic003G250160 Sobic007G081701 Sobic007G081701 Sobic007G154400--Sobic007G081701 Sobic010G202200--Sobic009G230800 Sobic010G202200--Sobic006G269101 Sobic010G202200--Sobic008G148600 Sobic008G136601 Sobic008G136601 Sobic010G202200--Sobic008G136601 Sobic001G340800 Sobic001G340800 Sobic010G202200--Sobic001G340800 Sobic006G027601 Sobic006G027601 Sobic010G202200--Sobic006G027601 Sobic010G202200--Sobic005G110424 Sobic010G202200--Sobic003G156900 Sobic008G097966 Sobic008G097966 Sobic010G202200--Sobic008G097966 Sobic008G036600--Sobic010G202200 Sobic008G036600--Sobic003G236000 Sobic008G036600--Sobic001G024400 Sobic008G036600--Sobic010G024400 Sobic008G036600--Sobic005G225500 Sobic008G036600--Sobic005G110424 Sobic007G039200 Sobic007G039200 Sobic008G036600--Sobic007G039200 Sobic005G185500 Sobic005G185500 Sobic008G036600--Sobic005G185500 Sobic008G036600--Sobic009G230800 Sobic004G011900--Sobic010G146000 Sobic004G011900--Sobic008G100600 Sobic004G011900--Sobic008G100300 Sobic004G011900--Sobic003G213000 Sobic004G011900--Sobic004G082800 Sobic004G011900--Sobic008G036600 Sobic007G082200 Sobic007G082200 Sobic004G011900--Sobic007G082200 Sobic004G011900--Sobic005G110424 Sobic004G011900--Sobic001G405100
Octagon: transcription factors


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