Gene annotation
Transcriptome id Sobic.003G159200.1
Synonym PARP1, PP, ATPARP1, Sb03g013880, APP
Functional annotation poly synthetase 2-A, putative, expressed
UniProt C5XJX0
Pfam PF05406 PF02877 PF00644
Panther DB PTHR10459 PTHR10459:SF64
NCBI CDD KOG1037; NAD+ ADP-ribosyltransferase Parp, required for poly-ADP ribosylation of nuclear proteins
KEGG Orthology K10798; poly [ADP-ribose] polymerase 2/3/4
Gene Ontology GO:0006471; protein ADP-ribosylation GO:0003950NAD+ ADP-ribosyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G02390 : poly(ADP-ribose) polymerase
RAP-DB (Rice) LOC_Os01g24940.1 : poly synthetase 2-A, putative, expressed
MaizeGDB (Corn) Zm00025a036236 , Zm00025a036226
Brachypodium KQK04265
Barley HORVU6Hr1G087810.1 , HORVU7Hr1G096270.15 , HORVU7Hr1G096270.14 , HORVU7Hr1G096270.17 , HORVU7Hr1G096270.16 , HORVU7Hr1G096270.11 , HORVU7Hr1G096270.10 , HORVU7Hr1G096270.13 , HORVU7Hr1G096270.12 , HORVU7Hr1G096270.1 , HORVU7Hr1G096270.3 , HORVU7Hr1G096270.2 , HORVU7Hr1G096270.5 , HORVU7Hr1G096270.4 , HORVU7Hr1G096270.7 , HORVU7Hr1G096270.6 , HORVU7Hr1G096270.9 , HORVU7Hr1G096270.8
Wheat TraesCS6B02G410300 , TraesCS7D02G407800 , TraesCS7D02G407800 , TraesCS7D02G407800 , TraesCS7B02G314600 , TraesCS7B02G314600 , TraesCS7A02G414700 , TraesCS7A02G414700 , TraesCS7A02G414700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G055700 tetratricopeptide repeat domain containing protein, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
2 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
3 Sobic.002G171300 - -
4 Sobic.004G089000 sterol glucosyltransferase, putative, expressed -
5 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
6 Sobic.002G235200 PPR repeat domain containing protein, putative, expressed -
7 Sobic.009G098300 - -
8 Sobic.008G088872 - -
9 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
10 Sobic.009G201700 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
11 Sobic.009G080100 - -
12 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9
13 Sobic.003G036400 - K03254: translation initiation factor 3 subunit A
14 Sobic.003G436000 expressed protein -
15 Sobic.006G043400 - -
16 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
17 Sobic.010G102600 pentatricopeptide, putative, expressed -
18 Sobic.001G066500 zinc ion binding protein, putative, expressed -
19 Sobic.003G146600 pumilio-family RNA binding repeat containing protein, expressed K14790: nucleolar protein 9
20 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14


Gene co-expression network
sample Sobic003G159200 Sobic003G159200 Sobic010G055700 Sobic010G055700 Sobic003G159200--Sobic010G055700 Sobic005G062200 Sobic005G062200 Sobic003G159200--Sobic005G062200 Sobic002G171300 Sobic002G171300 Sobic003G159200--Sobic002G171300 Sobic004G089000 Sobic004G089000 Sobic003G159200--Sobic004G089000 Sobic010G059500 Sobic010G059500 Sobic003G159200--Sobic010G059500 Sobic002G235200 Sobic002G235200 Sobic003G159200--Sobic002G235200 Sobic009G098300 Sobic009G098300 Sobic003G159200--Sobic009G098300 Sobic008G088872 Sobic008G088872 Sobic003G159200--Sobic008G088872 Sobic003G114400 Sobic003G114400 Sobic003G159200--Sobic003G114400 Sobic010G003400 Sobic010G003400 Sobic010G055700--Sobic010G003400 Sobic006G086600 Sobic006G086600 Sobic010G055700--Sobic006G086600 Sobic003G146600 Sobic003G146600 Sobic010G055700--Sobic003G146600 Sobic010G055700--Sobic010G059500 Sobic010G055700--Sobic002G235200 Sobic001G401500 Sobic001G401500 Sobic010G055700--Sobic001G401500 Sobic008G160000 Sobic008G160000 Sobic010G055700--Sobic008G160000 Sobic008G051200 Sobic008G051200 Sobic010G055700--Sobic008G051200 Sobic001G145400 Sobic001G145400 Sobic010G055700--Sobic001G145400 Sobic005G062200--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic005G062200--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic002G042600 Sobic002G042600 Sobic005G062200--Sobic002G042600 Sobic003G209200 Sobic003G209200 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic005G108000 Sobic005G108000 Sobic002G171300--Sobic005G108000 Sobic002G171300--Sobic003G146600 Sobic004G224600 Sobic004G224600 Sobic002G171300--Sobic004G224600 Sobic006G002800 Sobic006G002800 Sobic002G171300--Sobic006G002800 Sobic009G211200 Sobic009G211200 Sobic002G171300--Sobic009G211200 Sobic005G026400 Sobic005G026400 Sobic002G171300--Sobic005G026400 Sobic001G431400 Sobic001G431400 Sobic002G171300--Sobic001G431400 Sobic002G171300--Sobic002G235200 Sobic010G102600 Sobic010G102600 Sobic002G171300--Sobic010G102600 Sobic008G063300 Sobic008G063300 Sobic004G089000--Sobic008G063300 Sobic006G216100 Sobic006G216100 Sobic004G089000--Sobic006G216100 Sobic003G032700 Sobic003G032700 Sobic004G089000--Sobic003G032700 Sobic001G455600 Sobic001G455600 Sobic004G089000--Sobic001G455600 Sobic004G089000--Sobic010G059500 Sobic001G111850 Sobic001G111850 Sobic004G089000--Sobic001G111850 Sobic006G093300 Sobic006G093300 Sobic004G089000--Sobic006G093300 Sobic003G171500 Sobic003G171500 Sobic004G089000--Sobic003G171500 Sobic007G017800 Sobic007G017800 Sobic004G089000--Sobic007G017800 Sobic009G084900 Sobic009G084900 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic006G077200 Sobic006G077200 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic002G235200--Sobic006G086600 Sobic001G089600 Sobic001G089600 Sobic002G235200--Sobic001G089600 Sobic002G235200--Sobic001G145400 Sobic002G235200--Sobic010G059500 Sobic002G235200--Sobic003G146600 Sobic006G166200 Sobic006G166200 Sobic002G235200--Sobic006G166200 Sobic003G036400 Sobic003G036400 Sobic002G235200--Sobic003G036400 Sobic004G320500 Sobic004G320500 Sobic002G235200--Sobic004G320500 Sobic002G235200--Sobic004G224600 Sobic010G080550 Sobic010G080550 Sobic009G098300--Sobic010G080550 Sobic001G245000 Sobic001G245000 Sobic009G098300--Sobic001G245000 Sobic009G098300--Sobic003G146600 Sobic009G098300--Sobic003G159200 Sobic006G216200 Sobic006G216200 Sobic009G098300--Sobic006G216200 Sobic001G532400 Sobic001G532400 Sobic009G098300--Sobic001G532400 Sobic009G090500 Sobic009G090500 Sobic009G098300--Sobic009G090500 Sobic001G332700 Sobic001G332700 Sobic009G098300--Sobic001G332700 Sobic009G098300--Sobic008G088872 Sobic005G162500 Sobic005G162500 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic008G088872--Sobic009G131300 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic002G429300 Sobic002G429300 Sobic008G088872--Sobic002G429300 Sobic008G088872--Sobic002G335600 Sobic006G260500 Sobic006G260500 Sobic003G114400--Sobic006G260500 Sobic003G114400--Sobic005G062200 Sobic003G114400--Sobic008G088872 Sobic006G077300 Sobic006G077300 Sobic003G114400--Sobic006G077300 Sobic005G090300 Sobic005G090300 Sobic003G114400--Sobic005G090300 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G316200 Sobic003G316200 Sobic003G114400--Sobic003G316200 Sobic004G241900 Sobic004G241900 Sobic003G114400--Sobic004G241900
Octagon: transcription factors


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