Gene annotation
Transcriptome id Sobic.009G080100.2,Sobic.009G080100.13,Sobic.009G080100.14,Sobic.009G080100.11,Sobic.009G080100.6,Sobic.009G080100.8,Sobic.009G080100.9,Sobic.009G080100.12,Sobic.009G080100.7,Sobic.009G080100.4,Sobic.009G080100.10,Sobic.009G080100.5
Synonym
Functional annotation -
UniProt A0A1B6P768 , A0A1B6P782 , A0A1B6P769
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
2 Sobic.008G098600 DNA-directed RNA polymerase III subunit RPC9, putative, expressed -
3 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
4 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
5 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
6 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
7 Sobic.010G128101 - -
8 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
9 Sobic.010G055700 tetratricopeptide repeat domain containing protein, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
10 Sobic.010G166400 initiator tRNA phosphoribosyl transferase family protein, putative, expressed K15463: tRNA A64-2'-O-ribosylphosphate transferase
11 Sobic.007G140400 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease
12 Sobic.010G151900 ribonuclease P family protein, putative, expressed K03538: POP4, ribonuclease P protein subunit POP4
13 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
14 Sobic.001G127100 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
15 Sobic.007G207200 phenylalanyl-tRNA synthetase beta chain, putative, expressed K01890: FARSB, phenylalanyl-tRNA synthetase beta chain
16 Sobic.006G142400 suppressor of stem-loop protein 1, putative, expressed K03142: TFIIH2, GTF2H2, transcription initiation factor TFIIH subunit 2
17 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.001G289700 actin-related protein 2/3 complex subunit 2, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
19 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
20 Sobic.004G297000 expressed protein -


Gene co-expression network
sample Sobic009G080100 Sobic009G080100 Sobic010G007100 Sobic010G007100 Sobic009G080100--Sobic010G007100 Sobic008G098600 Sobic008G098600 Sobic009G080100--Sobic008G098600 Sobic010G264000 Sobic010G264000 Sobic009G080100--Sobic010G264000 Sobic007G105900 Sobic007G105900 Sobic009G080100--Sobic007G105900 Sobic003G006400 Sobic003G006400 Sobic009G080100--Sobic003G006400 Sobic001G099900 Sobic001G099900 Sobic009G080100--Sobic001G099900 Sobic010G128101 Sobic010G128101 Sobic009G080100--Sobic010G128101 Sobic001G145400 Sobic001G145400 Sobic009G080100--Sobic001G145400 Sobic010G055700 Sobic010G055700 Sobic009G080100--Sobic010G055700 Sobic010G007100--Sobic001G145400 Sobic008G147200 Sobic008G147200 Sobic010G007100--Sobic008G147200 Sobic004G340400 Sobic004G340400 Sobic010G007100--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic010G007100--Sobic006G086600 Sobic005G137700 Sobic005G137700 Sobic010G007100--Sobic005G137700 Sobic006G077200 Sobic006G077200 Sobic010G007100--Sobic006G077200 Sobic002G235200 Sobic002G235200 Sobic010G007100--Sobic002G235200 Sobic006G002800 Sobic006G002800 Sobic010G007100--Sobic006G002800 Sobic003G042400 Sobic003G042400 Sobic010G007100--Sobic003G042400 Sobic008G098600--Sobic010G007100 Sobic003G214300 Sobic003G214300 Sobic008G098600--Sobic003G214300 Sobic003G382500 Sobic003G382500 Sobic008G098600--Sobic003G382500 Sobic009G046700 Sobic009G046700 Sobic008G098600--Sobic009G046700 Sobic008G098600--Sobic003G006400 Sobic006G142400 Sobic006G142400 Sobic008G098600--Sobic006G142400 Sobic009G251200 Sobic009G251200 Sobic008G098600--Sobic009G251200 Sobic008G098600--Sobic010G264000 Sobic001G322600 Sobic001G322600 Sobic008G098600--Sobic001G322600 Sobic006G270600 Sobic006G270600 Sobic010G264000--Sobic006G270600 Sobic008G129600 Sobic008G129600 Sobic010G264000--Sobic008G129600 Sobic008G103300 Sobic008G103300 Sobic010G264000--Sobic008G103300 Sobic001G042200 Sobic001G042200 Sobic010G264000--Sobic001G042200 Sobic010G235200 Sobic010G235200 Sobic010G264000--Sobic010G235200 Sobic003G363700 Sobic003G363700 Sobic010G264000--Sobic003G363700 Sobic003G182300 Sobic003G182300 Sobic010G264000--Sobic003G182300 Sobic001G492200 Sobic001G492200 Sobic010G264000--Sobic001G492200 Sobic010G264000--Sobic006G142400 Sobic001G405600 Sobic001G405600 Sobic007G105900--Sobic001G405600 Sobic001G035200 Sobic001G035200 Sobic007G105900--Sobic001G035200 Sobic007G017800 Sobic007G017800 Sobic007G105900--Sobic007G017800 Sobic002G136400 Sobic002G136400 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic010G059500 Sobic010G059500 Sobic007G105900--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G189000 Sobic007G189000 Sobic007G105900--Sobic007G189000 Sobic006G208500 Sobic006G208500 Sobic003G006400--Sobic006G208500 Sobic006G200700 Sobic006G200700 Sobic003G006400--Sobic006G200700 Sobic002G275600 Sobic002G275600 Sobic003G006400--Sobic002G275600 Sobic001G369000 Sobic001G369000 Sobic003G006400--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic003G006400--Sobic006G138000 Sobic010G151900 Sobic010G151900 Sobic003G006400--Sobic010G151900 Sobic003G006400--Sobic001G145400 Sobic003G006400--Sobic006G077200 Sobic003G006400--Sobic010G007100 Sobic004G208500 Sobic004G208500 Sobic001G099900--Sobic004G208500 Sobic001G015400 Sobic001G015400 Sobic001G099900--Sobic001G015400 Sobic001G467100 Sobic001G467100 Sobic001G099900--Sobic001G467100 Sobic002G150700 Sobic002G150700 Sobic001G099900--Sobic002G150700 Sobic003G146600 Sobic003G146600 Sobic001G099900--Sobic003G146600 Sobic001G474400 Sobic001G474400 Sobic001G099900--Sobic001G474400 Sobic001G428800 Sobic001G428800 Sobic001G099900--Sobic001G428800 Sobic001G099900--Sobic006G142400 Sobic001G156900 Sobic001G156900 Sobic001G099900--Sobic001G156900 Sobic010G128101--Sobic008G098600 Sobic010G128101--Sobic009G080100 Sobic007G006900 Sobic007G006900 Sobic010G128101--Sobic007G006900 Sobic010G128101--Sobic003G382500 Sobic006G043300 Sobic006G043300 Sobic010G128101--Sobic006G043300 Sobic010G128101--Sobic010G007100 Sobic010G128101--Sobic010G151900 Sobic005G001400 Sobic005G001400 Sobic010G128101--Sobic005G001400 Sobic001G262900 Sobic001G262900 Sobic010G128101--Sobic001G262900 Sobic001G145400--Sobic006G086600 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic001G145400--Sobic010G007100 Sobic001G145400--Sobic004G340400 Sobic009G084900 Sobic009G084900 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic010G003400 Sobic010G003400 Sobic010G055700--Sobic010G003400 Sobic010G055700--Sobic006G086600 Sobic010G055700--Sobic003G146600 Sobic010G055700--Sobic010G059500 Sobic010G055700--Sobic002G235200 Sobic001G401500 Sobic001G401500 Sobic010G055700--Sobic001G401500 Sobic008G160000 Sobic008G160000 Sobic010G055700--Sobic008G160000 Sobic008G051200 Sobic008G051200 Sobic010G055700--Sobic008G051200 Sobic010G055700--Sobic001G145400
Octagon: transcription factors


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