Gene annotation
Transcriptome id Sobic.003G377600.1
Synonym
Functional annotation -
UniProt A0A1B6Q7C3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G093000.26 , HORVU1Hr1G093000.9 , HORVU1Hr1G093000.8 , HORVU1Hr1G093000.3 , HORVU1Hr1G093000.2 , HORVU1Hr1G093000.1 , HORVU1Hr1G093000.7 , HORVU1Hr1G093000.6 , HORVU1Hr1G093000.5 , HORVU1Hr1G093000.41 , HORVU1Hr1G093000.24 , HORVU1Hr1G093000.19 , HORVU1Hr1G093000.18 , HORVU1Hr1G093000.39 , HORVU1Hr1G093000.38 , HORVU1Hr1G093000.13 , HORVU1Hr1G093000.12 , HORVU1Hr1G093000.37 , HORVU1Hr1G093000.10 , HORVU1Hr1G093000.30 , HORVU1Hr1G093000.15 , HORVU1Hr1G093000.32 , HORVU1Hr1G093000.22 , HORVU1Hr1G093000.21 , HORVU1Hr1G093000.27 , HORVU1Hr1G093000.42 , HORVU1Hr1G093000.28 , HORVU1Hr1G093000.35 , HORVU1Hr1G093000.34 , HORVU1Hr1G093000.11 , HORVU1Hr1G093000.36 , HORVU1Hr1G093000.4 , HORVU1Hr1G093000.16 , HORVU1Hr1G093000.33 , HORVU1Hr1G093000.14
Wheat TraesCS1D02G435700 , TraesCS1B02G460500 , TraesCS1B02G460500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
2 Sobic.003G190400 rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed -
3 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
4 Sobic.004G038800 OsFBX188 - F-box domain containing protein, expressed -
5 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
6 Sobic.001G446850 - -
7 Sobic.002G431500 - -
8 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
9 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
10 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.008G167600 VTC2, putative, expressed -
12 Sobic.010G177400 dehydrogenase/reductase SDR family member 12, putative, expressed K11168: dehydrogenase/reductase SDR family member 12
13 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
14 Sobic.007G190000 expressed protein -
15 Sobic.006G275100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
16 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
17 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
18 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
19 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
20 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7


Gene co-expression network
sample Sobic003G377600 Sobic003G377600 Sobic004G231900 Sobic004G231900 Sobic003G377600--Sobic004G231900 Sobic003G190400 Sobic003G190400 Sobic003G377600--Sobic003G190400 Sobic002G383600 Sobic002G383600 Sobic003G377600--Sobic002G383600 Sobic004G038800 Sobic004G038800 Sobic003G377600--Sobic004G038800 Sobic006G257800 Sobic006G257800 Sobic003G377600--Sobic006G257800 Sobic001G446850 Sobic001G446850 Sobic003G377600--Sobic001G446850 Sobic002G431500 Sobic002G431500 Sobic003G377600--Sobic002G431500 Sobic003G301900 Sobic003G301900 Sobic003G377600--Sobic003G301900 Sobic007G146400 Sobic007G146400 Sobic003G377600--Sobic007G146400 Sobic006G219600 Sobic006G219600 Sobic004G231900--Sobic006G219600 Sobic006G051800 Sobic006G051800 Sobic004G231900--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic004G231900--Sobic009G074400 Sobic004G146600 Sobic004G146600 Sobic004G231900--Sobic004G146600 Sobic008G167600 Sobic008G167600 Sobic004G231900--Sobic008G167600 Sobic004G001500 Sobic004G001500 Sobic004G231900--Sobic004G001500 Sobic004G231900--Sobic001G446850 Sobic004G189200 Sobic004G189200 Sobic004G231900--Sobic004G189200 Sobic004G312600 Sobic004G312600 Sobic004G231900--Sobic004G312600 Sobic010G020800 Sobic010G020800 Sobic003G190400--Sobic010G020800 Sobic003G190400--Sobic003G301900 Sobic002G187700 Sobic002G187700 Sobic003G190400--Sobic002G187700 Sobic005G084500 Sobic005G084500 Sobic003G190400--Sobic005G084500 Sobic007G190000 Sobic007G190000 Sobic003G190400--Sobic007G190000 Sobic004G356700 Sobic004G356700 Sobic003G190400--Sobic004G356700 Sobic002G146300 Sobic002G146300 Sobic003G190400--Sobic002G146300 Sobic004G169000 Sobic004G169000 Sobic003G190400--Sobic004G169000 Sobic006G002300 Sobic006G002300 Sobic003G190400--Sobic006G002300 Sobic002G383600--Sobic006G257800 Sobic010G227100 Sobic010G227100 Sobic002G383600--Sobic010G227100 Sobic002G383600--Sobic006G051800 Sobic002G383600--Sobic009G074400 Sobic002G383600--Sobic004G001500 Sobic003G107500 Sobic003G107500 Sobic002G383600--Sobic003G107500 Sobic002G383600--Sobic004G189200 Sobic006G275100 Sobic006G275100 Sobic002G383600--Sobic006G275100 Sobic002G383600--Sobic007G190000 Sobic006G072601 Sobic006G072601 Sobic004G038800--Sobic006G072601 Sobic002G115050 Sobic002G115050 Sobic004G038800--Sobic002G115050 Sobic001G303100 Sobic001G303100 Sobic004G038800--Sobic001G303100 Sobic010G131700 Sobic010G131700 Sobic004G038800--Sobic010G131700 Sobic002G115075 Sobic002G115075 Sobic004G038800--Sobic002G115075 Sobic001G381600 Sobic001G381600 Sobic004G038800--Sobic001G381600 Sobic010G033100 Sobic010G033100 Sobic004G038800--Sobic010G033100 Sobic007G198400 Sobic007G198400 Sobic004G038800--Sobic007G198400 Sobic007G106800 Sobic007G106800 Sobic004G038800--Sobic007G106800 Sobic006G257800--Sobic008G167600 Sobic006G257800--Sobic004G189200 Sobic003G198800 Sobic003G198800 Sobic006G257800--Sobic003G198800 Sobic006G257800--Sobic002G383600 Sobic001G062300 Sobic001G062300 Sobic006G257800--Sobic001G062300 Sobic010G177400 Sobic010G177400 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G257800--Sobic006G051800 Sobic002G341000 Sobic002G341000 Sobic006G257800--Sobic002G341000 Sobic001G446850--Sobic004G231900 Sobic003G316500 Sobic003G316500 Sobic001G446850--Sobic003G316500 Sobic001G446850--Sobic004G001500 Sobic001G446850--Sobic002G146300 Sobic001G446850--Sobic010G020800 Sobic001G446850--Sobic007G190000 Sobic002G311100 Sobic002G311100 Sobic001G446850--Sobic002G311100 Sobic009G201300 Sobic009G201300 Sobic001G446850--Sobic009G201300 Sobic001G446850--Sobic009G074400 Sobic008G166550 Sobic008G166550 Sobic002G431500--Sobic008G166550 Sobic002G129400 Sobic002G129400 Sobic002G431500--Sobic002G129400 Sobic010G223200 Sobic010G223200 Sobic002G431500--Sobic010G223200 Sobic003G301500 Sobic003G301500 Sobic002G431500--Sobic003G301500 Sobic007G166200 Sobic007G166200 Sobic002G431500--Sobic007G166200 Sobic001G243200 Sobic001G243200 Sobic002G431500--Sobic001G243200 Sobic004G338000 Sobic004G338000 Sobic002G431500--Sobic004G338000 Sobic006G235300 Sobic006G235300 Sobic002G431500--Sobic006G235300 Sobic004G127800 Sobic004G127800 Sobic002G431500--Sobic004G127800 Sobic003G301900--Sobic002G146300 Sobic001G517800 Sobic001G517800 Sobic003G301900--Sobic001G517800 Sobic010G139600 Sobic010G139600 Sobic003G301900--Sobic010G139600 Sobic003G301900--Sobic003G190400 Sobic005G149200 Sobic005G149200 Sobic003G301900--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic003G301900--Sobic003G320700 Sobic003G301900--Sobic006G219600 Sobic006G087700 Sobic006G087700 Sobic003G301900--Sobic006G087700 Sobic003G301900--Sobic007G190000 Sobic001G057700 Sobic001G057700 Sobic007G146400--Sobic001G057700 Sobic005G132000 Sobic005G132000 Sobic007G146400--Sobic005G132000 Sobic007G146400--Sobic006G257800 Sobic007G146400--Sobic002G383600 Sobic007G146400--Sobic006G051800 Sobic007G146400--Sobic009G074400 Sobic007G146400--Sobic004G231900 Sobic003G339700 Sobic003G339700 Sobic007G146400--Sobic003G339700 Sobic002G417300 Sobic002G417300 Sobic007G146400--Sobic002G417300
Octagon: transcription factors


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