Gene annotation
Transcriptome id Sobic.003G414500.1
Synonym Sb03g044850
Functional annotation acyltransferase, putative, expressed
UniProt A0A1B6Q809
Pfam PF01553
Panther DB PTHR12497 PTHR12497:SF0
NCBI CDD KOG2847; Phosphate acyltransferase
KEGG Orthology K13511; monolysocardiolipin acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process GO:0006644phospholipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G05510 : Phospholipid/glycerol acyltransferase family protein
RAP-DB (Rice) LOC_Os01g70570.1 : acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a039207
Brachypodium KQK11365
Barley HORVU3Hr1G097070.4 , HORVU3Hr1G097070.5 , HORVU3Hr1G097070.6 , HORVU3Hr1G097070.7 , HORVU3Hr1G097070.2 , HORVU3Hr1G097070.3
Wheat TraesCS3A02G449100 , TraesCS3A02G449100 , TraesCS3D02G441800 , TraesCS3B02G485800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G414500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G050200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.001G242800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.001G456100 integral membrane protein, putative, expressed -
4 Sobic.003G376400 expressed protein -
5 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
6 Sobic.001G426200 OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
7 Sobic.008G017200 WD domain, G-beta repeat domain containing protein, expressed K14320: aladin
8 Sobic.004G293000 MSP domain containing protein, expressed -
9 Sobic.007G188600 tRNA synthetase class II core domain containing protein, expressed K01880: GARS, glycyl-tRNA synthetase
10 Sobic.002G238300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLE6 - cellulose synthase-like family E, expressed -
11 Sobic.006G179700 Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
12 Sobic.004G190700 zinc finger, C3HC4 type, putative, expressed -
13 Sobic.003G445000 pectinacetylesterase domain containing protein, expressed -
14 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
15 Sobic.002G392800 thymidylate kinase, putative, expressed K00943: tmk, dTMP kinase
16 Sobic.006G239800 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
17 Sobic.005G105500 expressed protein -
18 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
19 Sobic.006G126200 alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed K15627: ASPSCR1, tether containing UBX domain for GLUT4
20 Sobic.003G182400 DNA-damage-repair/toleration protein DRT102, putative, expressed -


Gene co-expression network
sample Sobic003G414500 Sobic003G414500 Sobic010G050200 Sobic010G050200 Sobic003G414500--Sobic010G050200 Sobic001G242800 Sobic001G242800 Sobic003G414500--Sobic001G242800 Sobic001G456100 Sobic001G456100 Sobic003G414500--Sobic001G456100 Sobic003G376400 Sobic003G376400 Sobic003G414500--Sobic003G376400 Sobic003G004700 Sobic003G004700 Sobic003G414500--Sobic003G004700 Sobic001G426200 Sobic001G426200 Sobic003G414500--Sobic001G426200 Sobic008G017200 Sobic008G017200 Sobic003G414500--Sobic008G017200 Sobic004G293000 Sobic004G293000 Sobic003G414500--Sobic004G293000 Sobic007G188600 Sobic007G188600 Sobic003G414500--Sobic007G188600 Sobic006G179700 Sobic006G179700 Sobic010G050200--Sobic006G179700 Sobic008G156300 Sobic008G156300 Sobic010G050200--Sobic008G156300 Sobic006G177300 Sobic006G177300 Sobic010G050200--Sobic006G177300 Sobic006G203100 Sobic006G203100 Sobic010G050200--Sobic006G203100 Sobic002G143000 Sobic002G143000 Sobic010G050200--Sobic002G143000 Sobic005G105500 Sobic005G105500 Sobic010G050200--Sobic005G105500 Sobic004G081800 Sobic004G081800 Sobic010G050200--Sobic004G081800 Sobic006G126200 Sobic006G126200 Sobic010G050200--Sobic006G126200 Sobic010G050200--Sobic001G242800 Sobic002G392800 Sobic002G392800 Sobic001G242800--Sobic002G392800 Sobic002G319200 Sobic002G319200 Sobic001G242800--Sobic002G319200 Sobic004G152200 Sobic004G152200 Sobic001G242800--Sobic004G152200 Sobic008G004100 Sobic008G004100 Sobic001G242800--Sobic008G004100 Sobic001G112700 Sobic001G112700 Sobic001G242800--Sobic001G112700 Sobic009G126500 Sobic009G126500 Sobic001G242800--Sobic009G126500 Sobic001G432300 Sobic001G432300 Sobic001G242800--Sobic001G432300 Sobic009G151700 Sobic009G151700 Sobic001G242800--Sobic009G151700 Sobic001G242800--Sobic006G177300 Sobic006G230300 Sobic006G230300 Sobic001G456100--Sobic006G230300 Sobic010G194100 Sobic010G194100 Sobic001G456100--Sobic010G194100 Sobic001G049200 Sobic001G049200 Sobic001G456100--Sobic001G049200 Sobic003G273700 Sobic003G273700 Sobic001G456100--Sobic003G273700 Sobic007G221100 Sobic007G221100 Sobic001G456100--Sobic007G221100 Sobic007G157900 Sobic007G157900 Sobic001G456100--Sobic007G157900 Sobic010G193900 Sobic010G193900 Sobic001G456100--Sobic010G193900 Sobic009G238900 Sobic009G238900 Sobic001G456100--Sobic009G238900 Sobic002G242500 Sobic002G242500 Sobic001G456100--Sobic002G242500 Sobic005G044800 Sobic005G044800 Sobic003G376400--Sobic005G044800 Sobic002G166300 Sobic002G166300 Sobic003G376400--Sobic002G166300 Sobic004G301700 Sobic004G301700 Sobic003G376400--Sobic004G301700 Sobic001G057200 Sobic001G057200 Sobic003G376400--Sobic001G057200 Sobic010G123400 Sobic010G123400 Sobic003G376400--Sobic010G123400 Sobic003G376400--Sobic006G177300 Sobic003G376400--Sobic004G081800 Sobic006G244700 Sobic006G244700 Sobic003G376400--Sobic006G244700 Sobic003G372000 Sobic003G372000 Sobic003G376400--Sobic003G372000 Sobic001G218800 Sobic001G218800 Sobic003G004700--Sobic001G218800 Sobic010G108900 Sobic010G108900 Sobic003G004700--Sobic010G108900 Sobic010G176500 Sobic010G176500 Sobic003G004700--Sobic010G176500 Sobic001G380500 Sobic001G380500 Sobic003G004700--Sobic001G380500 Sobic009G108500 Sobic009G108500 Sobic003G004700--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic003G004700--Sobic006G109700 Sobic002G039000 Sobic002G039000 Sobic003G004700--Sobic002G039000 Sobic001G263000 Sobic001G263000 Sobic003G004700--Sobic001G263000 Sobic006G087100 Sobic006G087100 Sobic003G004700--Sobic006G087100 Sobic006G052400 Sobic006G052400 Sobic001G426200--Sobic006G052400 Sobic001G315500 Sobic001G315500 Sobic001G426200--Sobic001G315500 Sobic010G080500 Sobic010G080500 Sobic001G426200--Sobic010G080500 Sobic006G216600 Sobic006G216600 Sobic001G426200--Sobic006G216600 Sobic001G426200--Sobic009G238900 Sobic001G426200--Sobic002G392800 Sobic009G050200 Sobic009G050200 Sobic001G426200--Sobic009G050200 Sobic003G330500 Sobic003G330500 Sobic001G426200--Sobic003G330500 Sobic001G098500 Sobic001G098500 Sobic001G426200--Sobic001G098500 Sobic006G157000 Sobic006G157000 Sobic008G017200--Sobic006G157000 Sobic001G008500 Sobic001G008500 Sobic008G017200--Sobic001G008500 Sobic009G071700 Sobic009G071700 Sobic008G017200--Sobic009G071700 Sobic010G188000 Sobic010G188000 Sobic008G017200--Sobic010G188000 Sobic006G010000 Sobic006G010000 Sobic008G017200--Sobic006G010000 Sobic004G047200 Sobic004G047200 Sobic008G017200--Sobic004G047200 Sobic009G045900 Sobic009G045900 Sobic008G017200--Sobic009G045900 Sobic002G365900 Sobic002G365900 Sobic008G017200--Sobic002G365900 Sobic006G251600 Sobic006G251600 Sobic008G017200--Sobic006G251600 Sobic001G427200 Sobic001G427200 Sobic004G293000--Sobic001G427200 Sobic004G293000--Sobic005G044800 Sobic004G174100 Sobic004G174100 Sobic004G293000--Sobic004G174100 Sobic006G239800 Sobic006G239800 Sobic004G293000--Sobic006G239800 Sobic005G064800 Sobic005G064800 Sobic004G293000--Sobic005G064800 Sobic004G293000--Sobic003G376400 Sobic006G222100 Sobic006G222100 Sobic004G293000--Sobic006G222100 Sobic009G099500 Sobic009G099500 Sobic004G293000--Sobic009G099500 Sobic002G187300 Sobic002G187300 Sobic004G293000--Sobic002G187300 Sobic006G198600 Sobic006G198600 Sobic007G188600--Sobic006G198600 Sobic006G281500 Sobic006G281500 Sobic007G188600--Sobic006G281500 Sobic002G402500 Sobic002G402500 Sobic007G188600--Sobic002G402500 Sobic002G423500 Sobic002G423500 Sobic007G188600--Sobic002G423500 Sobic010G161525 Sobic010G161525 Sobic007G188600--Sobic010G161525 Sobic007G188600--Sobic006G251600 Sobic007G188600--Sobic006G157000 Sobic009G081500 Sobic009G081500 Sobic007G188600--Sobic009G081500 Sobic008G083400 Sobic008G083400 Sobic007G188600--Sobic008G083400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.