Gene annotation
Transcriptome id Sobic.003G434200.1
Synonym Sb03g046530
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF630/DUF632 domains containing protein, putative, expressed
UniProt A0A1B6Q8B1
Pfam PF04783 PF04782
Panther DB PTHR21450 PTHR21450:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G21740 : Protein of unknown function (DUF630 and DUF632)
RAP-DB (Rice) LOC_Os01g72970.1 : DUF630/DUF632 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039076
Brachypodium KQK11651
Barley HORVU3Hr1G110830.8 , HORVU3Hr1G110830.9 , HORVU3Hr1G110830.6 , HORVU3Hr1G110830.7 , HORVU3Hr1G110830.4 , HORVU3Hr1G110830.5 , HORVU3Hr1G110830.2 , HORVU3Hr1G110830.3 , HORVU3Hr1G110830.1
Wheat TraesCS3A02G503100 , TraesCS3D02G509700 , TraesCS3B02G566500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G424300 Pyrroline-5-carboxylate reductase(PubMedID : 24906815)@pyrroline-5-carboxylate reductase, putative, expressed K00286: pyrroline-5-carboxylate reductase
2 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
3 Sobic.009G169400 expressed protein -
4 Sobic.001G316900 bZIP family transcription factor, putative, expressed -
5 Sobic.001G152600 RIO1 family protein, expressed -
6 Sobic.001G163300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger protein-related, putative, expressed K11968: ariadne-1
7 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
8 Sobic.008G010900 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
9 Sobic.003G374850 - K12831: SF3B4, splicing factor 3B subunit 4
10 Sobic.004G153000 expressed protein -
11 Sobic.008G058200 pectate lyase family protein, expressed K01728: pectate lyase
12 Sobic.006G215000 PAZ domain-containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
13 Sobic.003G356300 cadmium tolerance factor, putative, expressed -
14 Sobic.003G122400 expressed protein -
15 Sobic.003G374700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
16 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
17 Sobic.003G312400 dymeclin, putative, expressed -
18 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
19 Sobic.004G202300 eukaryotic translation initiation factor 4B, putative, expressed -
20 Sobic.002G418100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic003G434200 Sobic003G434200 Sobic003G424300 Sobic003G424300 Sobic003G434200--Sobic003G424300 Sobic001G061900 Sobic001G061900 Sobic003G434200--Sobic001G061900 Sobic009G169400 Sobic009G169400 Sobic003G434200--Sobic009G169400 Sobic001G316900 Sobic001G316900 Sobic003G434200--Sobic001G316900 Sobic001G152600 Sobic001G152600 Sobic003G434200--Sobic001G152600 Sobic001G163300 Sobic001G163300 Sobic003G434200--Sobic001G163300 Sobic003G348200 Sobic003G348200 Sobic003G434200--Sobic003G348200 Sobic008G010900 Sobic008G010900 Sobic003G434200--Sobic008G010900 Sobic003G374850 Sobic003G374850 Sobic003G434200--Sobic003G374850 Sobic004G331900 Sobic004G331900 Sobic003G424300--Sobic004G331900 Sobic003G424300--Sobic003G348200 Sobic003G327600 Sobic003G327600 Sobic003G424300--Sobic003G327600 Sobic003G312400 Sobic003G312400 Sobic003G424300--Sobic003G312400 Sobic003G424300--Sobic001G061900 Sobic009G194200 Sobic009G194200 Sobic003G424300--Sobic009G194200 Sobic003G353400 Sobic003G353400 Sobic003G424300--Sobic003G353400 Sobic009G182200 Sobic009G182200 Sobic003G424300--Sobic009G182200 Sobic010G186500 Sobic010G186500 Sobic003G424300--Sobic010G186500 Sobic001G061900--Sobic001G316900 Sobic010G008600 Sobic010G008600 Sobic001G061900--Sobic010G008600 Sobic001G061900--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic001G061900--Sobic001G321800 Sobic002G068800 Sobic002G068800 Sobic001G061900--Sobic002G068800 Sobic001G515800 Sobic001G515800 Sobic001G061900--Sobic001G515800 Sobic007G223200 Sobic007G223200 Sobic001G061900--Sobic007G223200 Sobic001G061900--Sobic003G424300 Sobic001G217300 Sobic001G217300 Sobic001G061900--Sobic001G217300 Sobic006G207900 Sobic006G207900 Sobic009G169400--Sobic006G207900 Sobic007G169200 Sobic007G169200 Sobic009G169400--Sobic007G169200 Sobic004G162200 Sobic004G162200 Sobic009G169400--Sobic004G162200 Sobic004G278000 Sobic004G278000 Sobic009G169400--Sobic004G278000 Sobic002G197600 Sobic002G197600 Sobic009G169400--Sobic002G197600 Sobic001G122500 Sobic001G122500 Sobic009G169400--Sobic001G122500 Sobic008G059000 Sobic008G059000 Sobic009G169400--Sobic008G059000 Sobic004G176900 Sobic004G176900 Sobic009G169400--Sobic004G176900 Sobic004G244100 Sobic004G244100 Sobic009G169400--Sobic004G244100 Sobic003G144200 Sobic003G144200 Sobic001G316900--Sobic003G144200 Sobic001G316900--Sobic001G061900 Sobic003G017200 Sobic003G017200 Sobic001G316900--Sobic003G017200 Sobic009G170100 Sobic009G170100 Sobic001G316900--Sobic009G170100 Sobic006G110000 Sobic006G110000 Sobic001G316900--Sobic006G110000 Sobic001G316900--Sobic002G068800 Sobic001G157400 Sobic001G157400 Sobic001G316900--Sobic001G157400 Sobic009G159900 Sobic009G159900 Sobic001G316900--Sobic009G159900 Sobic009G037800 Sobic009G037800 Sobic001G316900--Sobic009G037800 Sobic008G161100 Sobic008G161100 Sobic001G152600--Sobic008G161100 Sobic001G152600--Sobic001G163300 Sobic001G137400 Sobic001G137400 Sobic001G152600--Sobic001G137400 Sobic005G202000 Sobic005G202000 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G152600--Sobic001G217300 Sobic005G166100 Sobic005G166100 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic001G163300--Sobic001G152600 Sobic001G163300--Sobic001G217300 Sobic001G163300--Sobic003G017200 Sobic001G163300--Sobic001G316900 Sobic001G163300--Sobic008G010900 Sobic006G200200 Sobic006G200200 Sobic001G163300--Sobic006G200200 Sobic008G094800 Sobic008G094800 Sobic001G163300--Sobic008G094800 Sobic001G163300--Sobic003G144200 Sobic006G017600 Sobic006G017600 Sobic001G163300--Sobic006G017600 Sobic003G348200--Sobic004G331900 Sobic004G184000 Sobic004G184000 Sobic003G348200--Sobic004G184000 Sobic001G196100 Sobic001G196100 Sobic003G348200--Sobic001G196100 Sobic010G277000 Sobic010G277000 Sobic003G348200--Sobic010G277000 Sobic001G542900 Sobic001G542900 Sobic003G348200--Sobic001G542900 Sobic001G116000 Sobic001G116000 Sobic003G348200--Sobic001G116000 Sobic009G187600 Sobic009G187600 Sobic003G348200--Sobic009G187600 Sobic003G348200--Sobic003G424300 Sobic004G358900 Sobic004G358900 Sobic003G348200--Sobic004G358900 Sobic006G223800 Sobic006G223800 Sobic008G010900--Sobic006G223800 Sobic008G010900--Sobic006G017600 Sobic001G112000 Sobic001G112000 Sobic008G010900--Sobic001G112000 Sobic006G199700 Sobic006G199700 Sobic008G010900--Sobic006G199700 Sobic004G101500 Sobic004G101500 Sobic008G010900--Sobic004G101500 Sobic002G342100 Sobic002G342100 Sobic008G010900--Sobic002G342100 Sobic003G409800 Sobic003G409800 Sobic008G010900--Sobic003G409800 Sobic005G110421 Sobic005G110421 Sobic008G010900--Sobic005G110421 Sobic010G090700 Sobic010G090700 Sobic008G010900--Sobic010G090700 Sobic003G031200 Sobic003G031200 Sobic003G374850--Sobic003G031200 Sobic005G044100 Sobic005G044100 Sobic003G374850--Sobic005G044100 Sobic002G280900 Sobic002G280900 Sobic003G374850--Sobic002G280900 Sobic006G094500 Sobic006G094500 Sobic003G374850--Sobic006G094500 Sobic003G410400 Sobic003G410400 Sobic003G374850--Sobic003G410400 Sobic010G088300 Sobic010G088300 Sobic003G374850--Sobic010G088300 Sobic001G434400 Sobic001G434400 Sobic003G374850--Sobic001G434400 Sobic003G374850--Sobic003G312400 Sobic001G294600 Sobic001G294600 Sobic003G374850--Sobic001G294600
Octagon: transcription factors


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