Gene annotation
Transcriptome id Sobic.004G052100.1
Synonym
Functional annotation -
UniProt A0A194YMW4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G039900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glycine dehydrogenase, putative, expressed K00281: GLDC, glycine dehydrogenase
2 Sobic.008G037800 ACT domain containing protein, expressed -
3 Sobic.002G137000 protein kinase, putative, expressed -
4 Sobic.010G049000 expressed protein -
5 Sobic.005G110532 - -
6 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
7 Sobic.007G107700 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
8 Sobic.003G327000 bZIP transcription factor domain containing protein, expressed -
9 Sobic.001G500700 expressed protein -
10 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
11 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
12 Sobic.002G138100 ACT domain containing protein, expressed -
13 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
14 Sobic.001G203400 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
15 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
16 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
17 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
18 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
19 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
20 Sobic.007G124500 methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic004G052100 Sobic004G052100 Sobic008G039900 Sobic008G039900 Sobic004G052100--Sobic008G039900 Sobic008G037800 Sobic008G037800 Sobic004G052100--Sobic008G037800 Sobic002G137000 Sobic002G137000 Sobic004G052100--Sobic002G137000 Sobic010G049000 Sobic010G049000 Sobic004G052100--Sobic010G049000 Sobic005G110532 Sobic005G110532 Sobic004G052100--Sobic005G110532 Sobic010G231500 Sobic010G231500 Sobic004G052100--Sobic010G231500 Sobic007G107700 Sobic007G107700 Sobic004G052100--Sobic007G107700 Sobic003G327000 Sobic003G327000 Sobic004G052100--Sobic003G327000 Sobic001G500700 Sobic001G500700 Sobic004G052100--Sobic001G500700 Sobic009G038701 Sobic009G038701 Sobic008G039900--Sobic009G038701 Sobic010G125833 Sobic010G125833 Sobic008G039900--Sobic010G125833 Sobic001G393300 Sobic001G393300 Sobic008G039900--Sobic001G393300 Sobic001G504400 Sobic001G504400 Sobic008G039900--Sobic001G504400 Sobic002G198300 Sobic002G198300 Sobic008G039900--Sobic002G198300 Sobic008G039900--Sobic003G327000 Sobic010G231200 Sobic010G231200 Sobic008G039900--Sobic010G231200 Sobic002G298800 Sobic002G298800 Sobic008G039900--Sobic002G298800 Sobic001G180200 Sobic001G180200 Sobic008G039900--Sobic001G180200 Sobic002G072400 Sobic002G072400 Sobic008G037800--Sobic002G072400 Sobic004G252500 Sobic004G252500 Sobic008G037800--Sobic004G252500 Sobic004G165900 Sobic004G165900 Sobic008G037800--Sobic004G165900 Sobic006G155500 Sobic006G155500 Sobic008G037800--Sobic006G155500 Sobic010G062500 Sobic010G062500 Sobic008G037800--Sobic010G062500 Sobic004G300100 Sobic004G300100 Sobic008G037800--Sobic004G300100 Sobic004G324100 Sobic004G324100 Sobic008G037800--Sobic004G324100 Sobic003G108900 Sobic003G108900 Sobic008G037800--Sobic003G108900 Sobic004G307100 Sobic004G307100 Sobic008G037800--Sobic004G307100 Sobic010G094900 Sobic010G094900 Sobic002G137000--Sobic010G094900 Sobic002G276100 Sobic002G276100 Sobic002G137000--Sobic002G276100 Sobic008G146900 Sobic008G146900 Sobic002G137000--Sobic008G146900 Sobic008G130100 Sobic008G130100 Sobic002G137000--Sobic008G130100 Sobic002G168500 Sobic002G168500 Sobic002G137000--Sobic002G168500 Sobic004G026500 Sobic004G026500 Sobic002G137000--Sobic004G026500 Sobic002G345700 Sobic002G345700 Sobic002G137000--Sobic002G345700 Sobic004G181600 Sobic004G181600 Sobic002G137000--Sobic004G181600 Sobic003G381200 Sobic003G381200 Sobic002G137000--Sobic003G381200 Sobic008G172300 Sobic008G172300 Sobic010G049000--Sobic008G172300 Sobic009G014100 Sobic009G014100 Sobic010G049000--Sobic009G014100 Sobic007G150100 Sobic007G150100 Sobic010G049000--Sobic007G150100 Sobic010G049000--Sobic005G110532 Sobic001G465700 Sobic001G465700 Sobic010G049000--Sobic001G465700 Sobic010G049000--Sobic008G039900 Sobic001G003200 Sobic001G003200 Sobic010G049000--Sobic001G003200 Sobic010G049000--Sobic003G108900 Sobic006G219150 Sobic006G219150 Sobic010G049000--Sobic006G219150 Sobic004G300000 Sobic004G300000 Sobic005G110532--Sobic004G300000 Sobic006G030400 Sobic006G030400 Sobic005G110532--Sobic006G030400 Sobic010G197000 Sobic010G197000 Sobic005G110532--Sobic010G197000 Sobic002G173100 Sobic002G173100 Sobic005G110532--Sobic002G173100 Sobic005G110532--Sobic010G049000 Sobic005G110532--Sobic001G003200 Sobic005G110532--Sobic003G108900 Sobic005G110532--Sobic009G014100 Sobic003G014300 Sobic003G014300 Sobic005G110532--Sobic003G014300 Sobic009G004100 Sobic009G004100 Sobic010G231500--Sobic009G004100 Sobic006G097500 Sobic006G097500 Sobic010G231500--Sobic006G097500 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic005G028800 Sobic005G028800 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic001G368600 Sobic001G368600 Sobic010G231500--Sobic001G368600 Sobic002G356900 Sobic002G356900 Sobic010G231500--Sobic002G356900 Sobic003G328100 Sobic003G328100 Sobic007G107700--Sobic003G328100 Sobic003G070900 Sobic003G070900 Sobic007G107700--Sobic003G070900 Sobic003G203000 Sobic003G203000 Sobic007G107700--Sobic003G203000 Sobic009G170200 Sobic009G170200 Sobic007G107700--Sobic009G170200 Sobic007G107700--Sobic005G028800 Sobic001G118400 Sobic001G118400 Sobic007G107700--Sobic001G118400 Sobic007G135800 Sobic007G135800 Sobic007G107700--Sobic007G135800 Sobic007G107700--Sobic010G231500 Sobic007G107700--Sobic001G368600 Sobic009G207900 Sobic009G207900 Sobic003G327000--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic003G327000--Sobic003G094100 Sobic003G327000--Sobic001G504400 Sobic003G327000--Sobic001G393300 Sobic003G327000--Sobic002G298800 Sobic003G327000--Sobic009G038701 Sobic003G327000--Sobic007G135800 Sobic003G327000--Sobic002G198300 Sobic003G327000--Sobic010G125833 Sobic006G265900 Sobic006G265900 Sobic001G500700--Sobic006G265900 Sobic007G053800 Sobic007G053800 Sobic001G500700--Sobic007G053800 Sobic001G500700--Sobic006G097500 Sobic010G245200 Sobic010G245200 Sobic001G500700--Sobic010G245200 Sobic001G500700--Sobic002G298800 Sobic006G102000 Sobic006G102000 Sobic001G500700--Sobic006G102000 Sobic001G122300 Sobic001G122300 Sobic001G500700--Sobic001G122300 Sobic010G181300 Sobic010G181300 Sobic001G500700--Sobic010G181300 Sobic007G108900 Sobic007G108900 Sobic001G500700--Sobic007G108900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.