Gene annotation
Transcriptome id Sobic.004G056201.1
Synonym -
Functional annotation -
UniProt C5XW42
Pfam -
Panther DB PTHR33168 PTHR33168:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g45610.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ93545
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G419500 HAD superfamily phosphatase, putative, expressed -
2 Sobic.002G290500 armadillo/beta-catenin repeat protein-related, putative, expressed -
3 Sobic.002G338250 - -
4 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
5 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
6 Sobic.003G088400 Up-reguralion under drought(PubMedID : 24916767)@BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
7 Sobic.004G225800 GEM, putative, expressed -
8 Sobic.007G018000 expansin precursor, putative, expressed -
9 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.006G260300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@oryzain beta chain precursor, putative, expressed -
11 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
12 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
13 Sobic.004G318400 MTD1, putative, expressed -
14 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.007G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to wheat temperature-induced ipocalin (TaTIL-1)(PubMedID : 16306142)@OsTIL-2 Temperature-induced lipocalin-2, expressed K03098: apolipoprotein D and lipocalin family protein
16 Sobic.005G080900 expressed protein -
17 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
18 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
19 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
20 Sobic.001G154400 expp1 protein precursor, putative, expressed -


Gene co-expression network
sample Sobic004G056201 Sobic004G056201 Sobic002G419500 Sobic002G419500 Sobic004G056201--Sobic002G419500 Sobic002G290500 Sobic002G290500 Sobic004G056201--Sobic002G290500 Sobic002G338250 Sobic002G338250 Sobic004G056201--Sobic002G338250 Sobic007G074200 Sobic007G074200 Sobic004G056201--Sobic007G074200 Sobic004G117600 Sobic004G117600 Sobic004G056201--Sobic004G117600 Sobic003G088400 Sobic003G088400 Sobic004G056201--Sobic003G088400 Sobic004G225800 Sobic004G225800 Sobic004G056201--Sobic004G225800 Sobic007G018000 Sobic007G018000 Sobic004G056201--Sobic007G018000 Sobic002G393600 Sobic002G393600 Sobic004G056201--Sobic002G393600 Sobic002G419500--Sobic002G290500 Sobic002G419500--Sobic004G225800 Sobic002G419500--Sobic007G074200 Sobic009G170800 Sobic009G170800 Sobic002G419500--Sobic009G170800 Sobic004G102900 Sobic004G102900 Sobic002G419500--Sobic004G102900 Sobic006G066600 Sobic006G066600 Sobic002G419500--Sobic006G066600 Sobic004G067900 Sobic004G067900 Sobic002G419500--Sobic004G067900 Sobic002G419500--Sobic004G056201 Sobic002G308400 Sobic002G308400 Sobic002G419500--Sobic002G308400 Sobic002G290500--Sobic004G117600 Sobic002G290500--Sobic002G419500 Sobic008G111500 Sobic008G111500 Sobic002G290500--Sobic008G111500 Sobic008G082200 Sobic008G082200 Sobic002G290500--Sobic008G082200 Sobic002G290500--Sobic002G338250 Sobic001G365100 Sobic001G365100 Sobic002G290500--Sobic001G365100 Sobic010G259500 Sobic010G259500 Sobic002G290500--Sobic010G259500 Sobic003G191500 Sobic003G191500 Sobic002G290500--Sobic003G191500 Sobic001G447100 Sobic001G447100 Sobic002G290500--Sobic001G447100 Sobic002G338250--Sobic007G074200 Sobic002G338250--Sobic004G117600 Sobic009G154200 Sobic009G154200 Sobic002G338250--Sobic009G154200 Sobic002G338250--Sobic002G393600 Sobic002G338250--Sobic008G111500 Sobic001G389900 Sobic001G389900 Sobic002G338250--Sobic001G389900 Sobic003G349700 Sobic003G349700 Sobic002G338250--Sobic003G349700 Sobic002G338250--Sobic001G447100 Sobic006G136800 Sobic006G136800 Sobic002G338250--Sobic006G136800 Sobic007G074200--Sobic008G111500 Sobic007G074200--Sobic002G393600 Sobic007G074200--Sobic002G338250 Sobic007G074200--Sobic001G447100 Sobic007G074200--Sobic004G117600 Sobic009G131400 Sobic009G131400 Sobic007G074200--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic007G074200--Sobic003G146400 Sobic007G074200--Sobic003G349700 Sobic007G074200--Sobic009G154200 Sobic004G117600--Sobic007G074200 Sobic004G117600--Sobic002G338250 Sobic004G117600--Sobic009G154200 Sobic004G117600--Sobic008G111500 Sobic004G117600--Sobic002G393600 Sobic009G159400 Sobic009G159400 Sobic004G117600--Sobic009G159400 Sobic004G301300 Sobic004G301300 Sobic004G117600--Sobic004G301300 Sobic002G239200 Sobic002G239200 Sobic004G117600--Sobic002G239200 Sobic004G117600--Sobic006G136800 Sobic008G181100 Sobic008G181100 Sobic003G088400--Sobic008G181100 Sobic006G153100 Sobic006G153100 Sobic003G088400--Sobic006G153100 Sobic001G402050 Sobic001G402050 Sobic003G088400--Sobic001G402050 Sobic006G137800 Sobic006G137800 Sobic003G088400--Sobic006G137800 Sobic001G070800 Sobic001G070800 Sobic003G088400--Sobic001G070800 Sobic002G199650 Sobic002G199650 Sobic003G088400--Sobic002G199650 Sobic006G159600 Sobic006G159600 Sobic003G088400--Sobic006G159600 Sobic003G117600 Sobic003G117600 Sobic003G088400--Sobic003G117600 Sobic004G148200 Sobic004G148200 Sobic003G088400--Sobic004G148200 Sobic004G225800--Sobic002G419500 Sobic001G488200 Sobic001G488200 Sobic004G225800--Sobic001G488200 Sobic006G244500 Sobic006G244500 Sobic004G225800--Sobic006G244500 Sobic003G062200 Sobic003G062200 Sobic004G225800--Sobic003G062200 Sobic004G225800--Sobic004G067900 Sobic004G225800--Sobic002G393600 Sobic004G225800--Sobic002G290500 Sobic004G028800 Sobic004G028800 Sobic004G225800--Sobic004G028800 Sobic007G097700 Sobic007G097700 Sobic004G225800--Sobic007G097700 Sobic005G064200 Sobic005G064200 Sobic007G018000--Sobic005G064200 Sobic007G182500 Sobic007G182500 Sobic007G018000--Sobic007G182500 Sobic004G274500 Sobic004G274500 Sobic007G018000--Sobic004G274500 Sobic003G438300 Sobic003G438300 Sobic007G018000--Sobic003G438300 Sobic007G109400 Sobic007G109400 Sobic007G018000--Sobic007G109400 Sobic002G061200 Sobic002G061200 Sobic007G018000--Sobic002G061200 Sobic010G195600 Sobic010G195600 Sobic007G018000--Sobic010G195600 Sobic009G039500 Sobic009G039500 Sobic007G018000--Sobic009G039500 Sobic005G109800 Sobic005G109800 Sobic007G018000--Sobic005G109800 Sobic002G393600--Sobic007G074200 Sobic002G393600--Sobic002G338250 Sobic002G393600--Sobic004G117600 Sobic002G393600--Sobic008G111500 Sobic001G488000 Sobic001G488000 Sobic002G393600--Sobic001G488000 Sobic002G393600--Sobic009G131400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic002G393600--Sobic006G136800
Octagon: transcription factors


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