Gene annotation
Transcriptome id Sobic.004G060832.1
Synonym -
Functional annotation -
UniProt A0A1Z5RM72
Pfam -
Panther DB PTHR31717
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21150 : B-box 32
RAP-DB (Rice) LOC_Os02g07930.1 : B-box zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041988 , Zm00025a019145 , Zm00025a051656
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
2 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
3 Sobic.001G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
4 Sobic.001G482100 expressed protein -
5 Sobic.006G099700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed -
6 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
7 Sobic.001G034100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
8 Sobic.004G220700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lyase(PubMedID : 30367619)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
9 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
10 Sobic.003G279500 serine acetyltransferase 1(PubMedID : 26465154)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
11 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
12 Sobic.001G398700 expressed protein -
13 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
14 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
15 Sobic.003G279300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K06124: phosphoethanolamine/phosphocholine phosphatase
16 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
17 Sobic.003G136000 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
18 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
19 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4


Gene co-expression network
sample Sobic004G060832 Sobic004G060832 Sobic003G130800 Sobic003G130800 Sobic004G060832--Sobic003G130800 Sobic008G025500 Sobic008G025500 Sobic004G060832--Sobic008G025500 Sobic001G064500 Sobic001G064500 Sobic004G060832--Sobic001G064500 Sobic001G482100 Sobic001G482100 Sobic004G060832--Sobic001G482100 Sobic006G099700 Sobic006G099700 Sobic004G060832--Sobic006G099700 Sobic008G059200 Sobic008G059200 Sobic004G060832--Sobic008G059200 Sobic001G034100 Sobic001G034100 Sobic004G060832--Sobic001G034100 Sobic004G220700 Sobic004G220700 Sobic004G060832--Sobic004G220700 Sobic010G232100 Sobic010G232100 Sobic004G060832--Sobic010G232100 Sobic009G185800 Sobic009G185800 Sobic003G130800--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic003G130800--Sobic003G253000 Sobic001G459200 Sobic001G459200 Sobic003G130800--Sobic001G459200 Sobic006G180200 Sobic006G180200 Sobic003G130800--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic003G130800--Sobic002G345300 Sobic004G049900 Sobic004G049900 Sobic003G130800--Sobic004G049900 Sobic004G055200 Sobic004G055200 Sobic003G130800--Sobic004G055200 Sobic010G135000 Sobic010G135000 Sobic003G130800--Sobic010G135000 Sobic003G181500 Sobic003G181500 Sobic003G130800--Sobic003G181500 Sobic008G025500--Sobic006G099700 Sobic008G025500--Sobic010G232100 Sobic007G088000 Sobic007G088000 Sobic008G025500--Sobic007G088000 Sobic003G279500 Sobic003G279500 Sobic008G025500--Sobic003G279500 Sobic004G187900 Sobic004G187900 Sobic008G025500--Sobic004G187900 Sobic003G377900 Sobic003G377900 Sobic008G025500--Sobic003G377900 Sobic003G279300 Sobic003G279300 Sobic008G025500--Sobic003G279300 Sobic003G288600 Sobic003G288600 Sobic008G025500--Sobic003G288600 Sobic002G261100 Sobic002G261100 Sobic008G025500--Sobic002G261100 Sobic001G064500--Sobic001G482100 Sobic007G216300 Sobic007G216300 Sobic001G064500--Sobic007G216300 Sobic004G249900 Sobic004G249900 Sobic001G064500--Sobic004G249900 Sobic001G420100 Sobic001G420100 Sobic001G064500--Sobic001G420100 Sobic010G052800 Sobic010G052800 Sobic001G064500--Sobic010G052800 Sobic004G020000 Sobic004G020000 Sobic001G064500--Sobic004G020000 Sobic001G064500--Sobic003G130800 Sobic003G136000 Sobic003G136000 Sobic001G064500--Sobic003G136000 Sobic003G310700 Sobic003G310700 Sobic001G064500--Sobic003G310700 Sobic002G294700 Sobic002G294700 Sobic001G482100--Sobic002G294700 Sobic001G482100--Sobic001G064500 Sobic010G246000 Sobic010G246000 Sobic001G482100--Sobic010G246000 Sobic001G482100--Sobic010G052800 Sobic001G482100--Sobic003G288600 Sobic009G129000 Sobic009G129000 Sobic001G482100--Sobic009G129000 Sobic010G234600 Sobic010G234600 Sobic001G482100--Sobic010G234600 Sobic010G220200 Sobic010G220200 Sobic001G482100--Sobic010G220200 Sobic001G486100 Sobic001G486100 Sobic001G482100--Sobic001G486100 Sobic006G099700--Sobic008G025500 Sobic006G099700--Sobic007G088000 Sobic006G099700--Sobic010G232100 Sobic010G165500 Sobic010G165500 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic004G330700 Sobic004G330700 Sobic006G099700--Sobic004G330700 Sobic006G099700--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic006G099700--Sobic001G499300 Sobic006G099700--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic008G059200--Sobic001G281400 Sobic009G177800 Sobic009G177800 Sobic008G059200--Sobic009G177800 Sobic010G149300 Sobic010G149300 Sobic008G059200--Sobic010G149300 Sobic001G399100 Sobic001G399100 Sobic008G059200--Sobic001G399100 Sobic006G173900 Sobic006G173900 Sobic008G059200--Sobic006G173900 Sobic008G059200--Sobic004G187900 Sobic002G423300 Sobic002G423300 Sobic008G059200--Sobic002G423300 Sobic002G211900 Sobic002G211900 Sobic008G059200--Sobic002G211900 Sobic001G288800 Sobic001G288800 Sobic008G059200--Sobic001G288800 Sobic001G034100--Sobic003G130800 Sobic001G147200 Sobic001G147200 Sobic001G034100--Sobic001G147200 Sobic003G367451 Sobic003G367451 Sobic001G034100--Sobic003G367451 Sobic001G433400 Sobic001G433400 Sobic001G034100--Sobic001G433400 Sobic001G034100--Sobic010G149300 Sobic004G284500 Sobic004G284500 Sobic001G034100--Sobic004G284500 Sobic004G272800 Sobic004G272800 Sobic001G034100--Sobic004G272800 Sobic002G045300 Sobic002G045300 Sobic001G034100--Sobic002G045300 Sobic001G034100--Sobic001G281400 Sobic009G016000 Sobic009G016000 Sobic004G220700--Sobic009G016000 Sobic004G220700--Sobic006G099700 Sobic004G220700--Sobic004G060832 Sobic003G356900 Sobic003G356900 Sobic004G220700--Sobic003G356900 Sobic002G358800 Sobic002G358800 Sobic004G220700--Sobic002G358800 Sobic010G104100 Sobic010G104100 Sobic004G220700--Sobic010G104100 Sobic004G084900 Sobic004G084900 Sobic004G220700--Sobic004G084900 Sobic004G220700--Sobic008G025500 Sobic004G220700--Sobic010G232100 Sobic010G232100--Sobic004G055200 Sobic010G232100--Sobic008G025500 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic010G232100--Sobic006G099700
Octagon: transcription factors


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