Gene annotation
Transcriptome id Sobic.004G081100.1
Synonym AGD12, ZAC, Sb04g006690
Functional annotation stromal membrane-associated protein, putative, expressed
UniProt A0A194YNE0
Pfam PF00168 PF01412
Panther DB PTHR23180 PTHR23180:SF245
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology K12486; stromal membrane-associated protein
Gene Ontology GO:0005515; protein binding GO:0005096GTPase activator activity


Orthologs (automatic annotation)
TAIR AT4G21160 : Calcium-dependent ARF-type GTPase activating protein family
RAP-DB (Rice) LOC_Os02g10480.6 : stromal membrane-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a019590
Brachypodium -
Barley HORVU6Hr1G032940.12 , HORVU6Hr1G032940.10 , HORVU6Hr1G032940.11 , HORVU6Hr1G032940.1 , HORVU6Hr1G032940.2 , HORVU6Hr1G032940.5 , HORVU6Hr1G032940.6 , HORVU6Hr1G032940.7 , HORVU6Hr1G032940.8 , HORVU6Hr1G032940.9
Wheat TraesCS6B02G190600 , TraesCS6B02G190600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G026700 cornichon protein, putative, expressed -
2 Sobic.001G214200 lysM domain containing protein, putative, expressed -
3 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
4 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
5 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
6 Sobic.010G188200 SFT2, putative, expressed -
7 Sobic.004G289800 expressed protein -
8 Sobic.001G415000 expressed protein -
9 Sobic.002G204100 cytochrome c oxidase copper chaperone, putative, expressed K02260: cytochrome c oxidase assembly protein subunit 17
10 Sobic.009G225000 transmembrane protein 93, putative, expressed -
11 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
12 Sobic.004G350300 No apical meristem protein, putative, expressed -
13 Sobic.001G459500 leucine rich repeat containing protein, expressed -
14 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
15 Sobic.007G045600 MSP domain containing protein, expressed -
16 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
17 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
18 Sobic.006G264300 GA18008-PA, putative, expressed -
19 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
20 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J


Gene co-expression network
sample Sobic004G081100 Sobic004G081100 Sobic010G026700 Sobic010G026700 Sobic004G081100--Sobic010G026700 Sobic001G214200 Sobic001G214200 Sobic004G081100--Sobic001G214200 Sobic004G335000 Sobic004G335000 Sobic004G081100--Sobic004G335000 Sobic002G202300 Sobic002G202300 Sobic004G081100--Sobic002G202300 Sobic002G045300 Sobic002G045300 Sobic004G081100--Sobic002G045300 Sobic010G188200 Sobic010G188200 Sobic004G081100--Sobic010G188200 Sobic004G289800 Sobic004G289800 Sobic004G081100--Sobic004G289800 Sobic001G415000 Sobic001G415000 Sobic004G081100--Sobic001G415000 Sobic002G204100 Sobic002G204100 Sobic004G081100--Sobic002G204100 Sobic003G104700 Sobic003G104700 Sobic010G026700--Sobic003G104700 Sobic010G026700--Sobic001G214200 Sobic002G261900 Sobic002G261900 Sobic010G026700--Sobic002G261900 Sobic009G135600 Sobic009G135600 Sobic010G026700--Sobic009G135600 Sobic001G311100 Sobic001G311100 Sobic010G026700--Sobic001G311100 Sobic003G023000 Sobic003G023000 Sobic010G026700--Sobic003G023000 Sobic003G141700 Sobic003G141700 Sobic010G026700--Sobic003G141700 Sobic007G139700 Sobic007G139700 Sobic010G026700--Sobic007G139700 Sobic003G349300 Sobic003G349300 Sobic010G026700--Sobic003G349300 Sobic001G214200--Sobic010G026700 Sobic001G122500 Sobic001G122500 Sobic001G214200--Sobic001G122500 Sobic001G050400 Sobic001G050400 Sobic001G214200--Sobic001G050400 Sobic003G023500 Sobic003G023500 Sobic001G214200--Sobic003G023500 Sobic002G395600 Sobic002G395600 Sobic001G214200--Sobic002G395600 Sobic001G408100 Sobic001G408100 Sobic001G214200--Sobic001G408100 Sobic010G017000 Sobic010G017000 Sobic001G214200--Sobic010G017000 Sobic002G214900 Sobic002G214900 Sobic001G214200--Sobic002G214900 Sobic010G235200 Sobic010G235200 Sobic001G214200--Sobic010G235200 Sobic002G428200 Sobic002G428200 Sobic004G335000--Sobic002G428200 Sobic007G176200 Sobic007G176200 Sobic004G335000--Sobic007G176200 Sobic001G010700 Sobic001G010700 Sobic004G335000--Sobic001G010700 Sobic002G257400 Sobic002G257400 Sobic004G335000--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic004G335000--Sobic006G252200 Sobic001G236300 Sobic001G236300 Sobic004G335000--Sobic001G236300 Sobic001G461900 Sobic001G461900 Sobic004G335000--Sobic001G461900 Sobic001G058100 Sobic001G058100 Sobic004G335000--Sobic001G058100 Sobic007G045600 Sobic007G045600 Sobic004G335000--Sobic007G045600 Sobic003G253000 Sobic003G253000 Sobic002G202300--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic002G202300--Sobic003G220600 Sobic006G141500 Sobic006G141500 Sobic002G202300--Sobic006G141500 Sobic006G264300 Sobic006G264300 Sobic002G202300--Sobic006G264300 Sobic002G046100 Sobic002G046100 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic010G204300 Sobic010G204300 Sobic002G202300--Sobic010G204300 Sobic006G062800 Sobic006G062800 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic001G433400 Sobic001G433400 Sobic002G045300--Sobic001G433400 Sobic010G042100 Sobic010G042100 Sobic002G045300--Sobic010G042100 Sobic002G045300--Sobic003G253000 Sobic002G045300--Sobic003G220600 Sobic004G049900 Sobic004G049900 Sobic002G045300--Sobic004G049900 Sobic003G367451 Sobic003G367451 Sobic002G045300--Sobic003G367451 Sobic003G130800 Sobic003G130800 Sobic002G045300--Sobic003G130800 Sobic002G045300--Sobic009G135600 Sobic010G101500 Sobic010G101500 Sobic002G045300--Sobic010G101500 Sobic001G459500 Sobic001G459500 Sobic010G188200--Sobic001G459500 Sobic010G188200--Sobic007G045600 Sobic007G142500 Sobic007G142500 Sobic010G188200--Sobic007G142500 Sobic010G188200--Sobic001G461900 Sobic010G188200--Sobic004G289800 Sobic010G188200--Sobic009G135600 Sobic001G512400 Sobic001G512400 Sobic010G188200--Sobic001G512400 Sobic007G118000 Sobic007G118000 Sobic010G188200--Sobic007G118000 Sobic002G281300 Sobic002G281300 Sobic010G188200--Sobic002G281300 Sobic004G289800--Sobic007G045600 Sobic004G289800--Sobic009G135600 Sobic004G289800--Sobic001G461900 Sobic004G289800--Sobic010G188200 Sobic004G289800--Sobic003G349300 Sobic001G294900 Sobic001G294900 Sobic004G289800--Sobic001G294900 Sobic006G263900 Sobic006G263900 Sobic004G289800--Sobic006G263900 Sobic001G054200 Sobic001G054200 Sobic004G289800--Sobic001G054200 Sobic004G289800--Sobic007G142500 Sobic002G083266 Sobic002G083266 Sobic001G415000--Sobic002G083266 Sobic001G440700 Sobic001G440700 Sobic001G415000--Sobic001G440700 Sobic001G415000--Sobic006G264300 Sobic004G020000 Sobic004G020000 Sobic001G415000--Sobic004G020000 Sobic001G415000--Sobic010G026700 Sobic001G415000--Sobic002G202300 Sobic002G385900 Sobic002G385900 Sobic001G415000--Sobic002G385900 Sobic001G040800 Sobic001G040800 Sobic001G415000--Sobic001G040800 Sobic001G224400 Sobic001G224400 Sobic001G415000--Sobic001G224400 Sobic009G203100 Sobic009G203100 Sobic002G204100--Sobic009G203100 Sobic002G204100--Sobic003G253000 Sobic001G459200 Sobic001G459200 Sobic002G204100--Sobic001G459200 Sobic009G185800 Sobic009G185800 Sobic002G204100--Sobic009G185800 Sobic005G034400 Sobic005G034400 Sobic002G204100--Sobic005G034400 Sobic002G204100--Sobic004G049900 Sobic004G055200 Sobic004G055200 Sobic002G204100--Sobic004G055200 Sobic008G189300 Sobic008G189300 Sobic002G204100--Sobic008G189300 Sobic002G187500 Sobic002G187500 Sobic002G204100--Sobic002G187500
Octagon: transcription factors


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