Gene annotation
Transcriptome id Sobic.004G165400.1
Synonym
Functional annotation -
UniProt A0A194YR80
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G183400 resistance protein, putative, expressed -
2 Sobic.004G125200 - -
3 Sobic.008G019100 - -
4 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
5 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
6 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
7 Sobic.004G132600 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
8 Sobic.002G152700 rhodanese-like, putative, expressed -
9 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
10 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
11 Sobic.001G198800 -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.002G033800 expressed protein -
13 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
14 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
15 Sobic.003G199800 expressed protein -
16 Sobic.005G116100 expressed protein -
17 Sobic.010G006350 - -
18 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
19 Sobic.003G131000 expressed protein -
20 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic004G165400 Sobic004G165400 Sobic005G183400 Sobic005G183400 Sobic004G165400--Sobic005G183400 Sobic004G125200 Sobic004G125200 Sobic004G165400--Sobic004G125200 Sobic008G019100 Sobic008G019100 Sobic004G165400--Sobic008G019100 Sobic006G008700 Sobic006G008700 Sobic004G165400--Sobic006G008700 Sobic008G021300 Sobic008G021300 Sobic004G165400--Sobic008G021300 Sobic006G272900 Sobic006G272900 Sobic004G165400--Sobic006G272900 Sobic004G132600 Sobic004G132600 Sobic004G165400--Sobic004G132600 Sobic002G152700 Sobic002G152700 Sobic004G165400--Sobic002G152700 Sobic004G026300 Sobic004G026300 Sobic004G165400--Sobic004G026300 Sobic004G214900 Sobic004G214900 Sobic005G183400--Sobic004G214900 Sobic002G211000 Sobic002G211000 Sobic005G183400--Sobic002G211000 Sobic006G147300 Sobic006G147300 Sobic005G183400--Sobic006G147300 Sobic005G183400--Sobic004G125200 Sobic005G183400--Sobic006G272900 Sobic007G034300 Sobic007G034300 Sobic005G183400--Sobic007G034300 Sobic007G071500 Sobic007G071500 Sobic005G183400--Sobic007G071500 Sobic009G029001 Sobic009G029001 Sobic005G183400--Sobic009G029001 Sobic004G051100 Sobic004G051100 Sobic005G183400--Sobic004G051100 Sobic004G125200--Sobic004G214900 Sobic004G071800 Sobic004G071800 Sobic004G125200--Sobic004G071800 Sobic004G125200--Sobic004G132600 Sobic002G064000 Sobic002G064000 Sobic004G125200--Sobic002G064000 Sobic004G125200--Sobic006G147300 Sobic004G125200--Sobic005G183400 Sobic004G026700 Sobic004G026700 Sobic004G125200--Sobic004G026700 Sobic004G272600 Sobic004G272600 Sobic004G125200--Sobic004G272600 Sobic003G097800 Sobic003G097800 Sobic004G125200--Sobic003G097800 Sobic003G132100 Sobic003G132100 Sobic008G019100--Sobic003G132100 Sobic003G433900 Sobic003G433900 Sobic008G019100--Sobic003G433900 Sobic001G415400 Sobic001G415400 Sobic008G019100--Sobic001G415400 Sobic003G197400 Sobic003G197400 Sobic008G019100--Sobic003G197400 Sobic004G175500 Sobic004G175500 Sobic008G019100--Sobic004G175500 Sobic008G051000 Sobic008G051000 Sobic008G019100--Sobic008G051000 Sobic008G019100--Sobic002G152700 Sobic004G343300 Sobic004G343300 Sobic008G019100--Sobic004G343300 Sobic001G192100 Sobic001G192100 Sobic008G019100--Sobic001G192100 Sobic003G234400 Sobic003G234400 Sobic006G008700--Sobic003G234400 Sobic010G095000 Sobic010G095000 Sobic006G008700--Sobic010G095000 Sobic003G303700 Sobic003G303700 Sobic006G008700--Sobic003G303700 Sobic010G201700 Sobic010G201700 Sobic006G008700--Sobic010G201700 Sobic006G008700--Sobic008G021300 Sobic004G125700 Sobic004G125700 Sobic006G008700--Sobic004G125700 Sobic007G140800 Sobic007G140800 Sobic006G008700--Sobic007G140800 Sobic001G076900 Sobic001G076900 Sobic006G008700--Sobic001G076900 Sobic004G035500 Sobic004G035500 Sobic006G008700--Sobic004G035500 Sobic008G021300--Sobic003G303700 Sobic008G021300--Sobic002G152700 Sobic007G004800 Sobic007G004800 Sobic008G021300--Sobic007G004800 Sobic008G021300--Sobic006G272900 Sobic008G021300--Sobic004G035500 Sobic008G021300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic008G021300--Sobic001G519800 Sobic001G102800 Sobic001G102800 Sobic008G021300--Sobic001G102800 Sobic009G043000 Sobic009G043000 Sobic008G021300--Sobic009G043000 Sobic006G272900--Sobic008G021300 Sobic006G272900--Sobic009G043000 Sobic010G005500 Sobic010G005500 Sobic006G272900--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic006G272900--Sobic003G002300 Sobic006G272900--Sobic002G152700 Sobic006G272900--Sobic010G201700 Sobic003G387800 Sobic003G387800 Sobic006G272900--Sobic003G387800 Sobic006G272900--Sobic007G004800 Sobic006G272900--Sobic001G102800 Sobic004G132600--Sobic004G125200 Sobic004G132600--Sobic005G183400 Sobic004G132600--Sobic009G029001 Sobic004G132600--Sobic002G064000 Sobic004G132600--Sobic004G071800 Sobic004G118900 Sobic004G118900 Sobic004G132600--Sobic004G118900 Sobic004G132600--Sobic006G147300 Sobic004G132600--Sobic004G343300 Sobic004G132600--Sobic004G214900 Sobic002G152700--Sobic008G021300 Sobic001G527000 Sobic001G527000 Sobic002G152700--Sobic001G527000 Sobic002G033800 Sobic002G033800 Sobic002G152700--Sobic002G033800 Sobic002G152700--Sobic003G303700 Sobic002G152700--Sobic010G005500 Sobic002G152700--Sobic006G272900 Sobic002G152700--Sobic004G343300 Sobic009G030900 Sobic009G030900 Sobic002G152700--Sobic009G030900 Sobic002G152700--Sobic003G132100 Sobic003G131000 Sobic003G131000 Sobic004G026300--Sobic003G131000 Sobic010G276400 Sobic010G276400 Sobic004G026300--Sobic010G276400 Sobic003G199800 Sobic003G199800 Sobic004G026300--Sobic003G199800 Sobic004G026300--Sobic003G234400 Sobic010G038500 Sobic010G038500 Sobic004G026300--Sobic010G038500 Sobic001G111700 Sobic001G111700 Sobic004G026300--Sobic001G111700 Sobic001G068400 Sobic001G068400 Sobic004G026300--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic004G026300--Sobic002G040100 Sobic003G069100 Sobic003G069100 Sobic004G026300--Sobic003G069100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.